DY260382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 7.088e-60 Identity = 115/134 (85.82%), Postives = 124/134 (92.54%), Query Frame = 1 Query: 55 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEET 456 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWT+MYRKQHKKDIA EAVKK+RR+TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL E+ R++ ++ A+KAE T Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVT 134
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 3.293e-57 Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 55 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEETFKIKHLPNRSHPQ 495 MVLKTELCRFSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWT+M+RKQHKKD A EAVKK+RR+TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAAL E+ R++ ++ A+KAE K + + + Q Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQ 147
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 9.580e-57 Identity = 109/134 (81.34%), Postives = 120/134 (89.55%), Query Frame = 1 Query: 55 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEET 456 MVLKTELCRFSG KIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKP+KL WT+MYRKQHKKDI AEA KK+RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL E+ R++ ++ A+KAE T Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVT 134
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 6.866e-55 Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 55 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEETFKIK------HLPNRSHPQGCRL 507 MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL E+ R++ ++ A+K E K + ++P + P+ ++ Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVEYASKQQKSQVKGNIPKSAAPKAAKM 157
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 8.967e-55 Identity = 104/132 (78.79%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 55 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAE 450 MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL E+ R++ ++ A+K E Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVE 132
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.926e-26 Identity = 59/130 (45.38%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 61 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAE 450 +K EL FSG KIYPG+G F+R DS++F F +SK FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+ L + + D + A+KA+ Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKLAKDKEAKKADKAARKAEKAK 129
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.926e-26 Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 61 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAE 450 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL + + ++ A KA+ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKRAASESEKKAIKAK 129
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.926e-26 Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 61 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAE 450 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL + + ++ A KA+ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKKAASESEKKAIKAK 129
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.545e-25 Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 82 FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEE 453 FSG +IYPGKG ++R DS++F F N K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA+ E A+ Q Q A+KAE+ Sbjct: 8 FSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAKKQ---ETQAAKKAEK 127
BLAST of DY260382 vs. ExPASy Swiss-Prot
Match: RL24_CANGA (60S ribosomal protein L24 OS=Candida glabrata GN=RPL24 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.340e-25 Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 61 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALPELNARMQTDPHDQTAQKAEE 453 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT +YR+ HKK I E KK+ R T K R+IVGA+LE+I++RR+ KPEVR A R+ + A + D+ A+KAE+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKRD---DKAKADKEKKKADKAARKAEK 127 The following BLAST results are available for this feature:
BLAST of DY260382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260382 ID=DY260382; Name=DY260382; organism=Citrus clementina; type=EST; length=1133bpback to top |