DY260385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.247e-61 Identity = 101/142 (71.13%), Postives = 110/142 (77.46%), Query Frame = 2 Query: 59 HANG--GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 H NG GGGW+NA ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTATNFC GGWCNPPQQHFDLSQPVFQ IAQYRAG+VPVAY+RVPC RRGGI+ Sbjct: 18 HVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIR 159 HSP 2 Score: 30.0314 bits (66), Expect = 3.247e-61 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFTINGHSYFN V+ Sbjct: 159 RFTINGHSYFNLVL 172 HSP 3 Score: 30.0314 bits (66), Expect = 3.247e-61 Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS-TIWPA 588 +LITN+G AGDVH+ +K S T W A Sbjct: 171 VLITNVGGAGDVHSAMVKGSRTGWQA 196
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.214e-60 Identity = 96/136 (70.59%), Postives = 107/136 (78.68%), Query Frame = 2 Query: 71 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GGGWINA ATFY YGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTATNFC GGWCNPP +HFDL+QPVFQ IAQYRAG+VPV+Y+RVPCRRRGGI+ Sbjct: 23 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIR 158 HSP 2 Score: 33.8834 bits (76), Expect = 1.214e-60 Identity = 15/26 (57.69%), Postives = 21/26 (80.77%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS-TIWPA 588 +LITN+G AGDVH+ ++K S T+W A Sbjct: 170 VLITNVGGAGDVHSAAIKGSRTVWQA 195 HSP 3 Score: 30.4166 bits (67), Expect = 1.214e-60 Identity = 13/22 (59.09%), Postives = 14/22 (63.64%), Query Frame = 3 Query: 453 PAEEGEASRFTINGHSYFNQVV 518 P RFTINGHSYFN V+ Sbjct: 150 PCRRRGGIRFTINGHSYFNLVL 171
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.236e-56 Identity = 92/134 (68.66%), Postives = 101/134 (75.37%), Query Frame = 2 Query: 77 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GW+NA ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC +D WCLPG I+VTATNFC GGWCNPP HFDLSQPVFQ IAQY+AGVVPV+Y+RVPC RRGGI+ Sbjct: 29 GWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIR 162 HSP 2 Score: 31.187 bits (69), Expect = 1.236e-56 Identity = 14/24 (58.33%), Postives = 20/24 (83.33%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS-TIW 582 +L+TN+G AGDVH+V++K S T W Sbjct: 174 VLVTNVGGAGDVHSVAVKGSRTRW 197 HSP 3 Score: 30.0314 bits (66), Expect = 1.236e-56 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFTINGHSYFN V+ Sbjct: 162 RFTINGHSYFNLVL 175
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.168e-53 Identity = 88/134 (65.67%), Postives = 100/134 (74.63%), Query Frame = 2 Query: 77 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GW+NARATFY YGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT TNFC GGWCNPPQ HFDL+QP+F IAQY+AGVVPV Y+RV CRR+GGI+ Sbjct: 28 GWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIR 161 HSP 2 Score: 30.0314 bits (66), Expect = 1.168e-53 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFTINGHSYFN V+ Sbjct: 161 RFTINGHSYFNLVL 174 HSP 3 Score: 25.7942 bits (55), Expect = 1.168e-53 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLK-PSTIW 582 +LITN+ AGDV +VS+K +T W Sbjct: 173 VLITNVAGAGDVISVSIKGTNTRW 196
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 9.605e-53 Identity = 83/135 (61.48%), Postives = 97/135 (71.85%), Query Frame = 2 Query: 74 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GGW ATFY YGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL TI VTATNFC GGWCNPP QHFDL++P F IAQYRAG+VPV+++RVPC ++GGI+ Sbjct: 28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIR 162 HSP 2 Score: 32.3426 bits (72), Expect = 9.605e-53 Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS 573 +LI+N+G AGDVHAVS+K S Sbjct: 174 VLISNVGGAGDVHAVSIKGS 193 HSP 3 Score: 30.0314 bits (66), Expect = 9.605e-53 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFTINGHSYFN V+ Sbjct: 162 RFTINGHSYFNLVL 175
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.661e-52 Identity = 86/138 (62.32%), Postives = 105/138 (76.09%), Query Frame = 2 Query: 71 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GG WINA ATFY YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC+NDP WCLPG +I++TATNFC GGWCNPP++HFDL+ P+F IA+Y+AG+VPV+Y+R+PCR++GGI+ Sbjct: 29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIR 166 HSP 2 Score: 25.7942 bits (55), Expect = 4.661e-52 Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 3 Query: 453 PAEEGEASRFTINGHSYFNQVV 518 P + RFTING YFN V+ Sbjct: 158 PCRKKGGIRFTINGFKYFNLVL 179 HSP 3 Score: 25.0238 bits (53), Expect = 4.661e-52 Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS-TIW 582 +L+TN+ AGDV VS+K S T W Sbjct: 178 VLVTNVAGAGDVIKVSVKGSNTQW 201
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.027e-51 Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 2 Query: 71 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GG W NA ATFY YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC G +I++TATNFC GGWCNPP++HFDL+ PVF IAQYRAG+VPV+Y+RVPCR+RGGI+ Sbjct: 28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIR 165 HSP 2 Score: 28.8758 bits (63), Expect = 1.027e-51 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 3 Query: 453 PAEEGEASRFTINGHSYFNQVV 518 P + RFTINGH YFN V+ Sbjct: 157 PCRKRGGIRFTINGHRYFNLVL 178 HSP 3 Score: 23.0978 bits (48), Expect = 1.027e-51 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS 573 +LITN+ AGD+ S+K S Sbjct: 177 VLITNVAGAGDIVRASVKGS 196
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.424e-50 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 2 Query: 68 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV---NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 GGGGW +A ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C CLPG+++VTATNFC GGWCNPP+ HFD+SQPVFQ IA ++AG+VPV+Y+RV C+++GGI+ Sbjct: 60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIR 199 HSP 2 Score: 32.3426 bits (72), Expect = 1.424e-50 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKP--STIWPA 588 +L+TN+G AGDVHAV++K S W A Sbjct: 211 VLVTNVGGAGDVHAVAVKSERSAAWQA 237 HSP 3 Score: 30.0314 bits (66), Expect = 1.424e-50 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFTINGHSYFN V+ Sbjct: 199 RFTINGHSYFNLVL 212
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.175e-49 Identity = 82/139 (58.99%), Postives = 100/139 (71.94%), Query Frame = 2 Query: 62 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 A G GGW +A ATFY YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N CLPG+I VTATNFC GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG++ Sbjct: 18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVR 156 HSP 2 Score: 29.6462 bits (65), Expect = 1.175e-49 Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFT+NGHSYFN V+ Sbjct: 156 RFTVNGHSYFNLVL 169 HSP 3 Score: 26.9498 bits (58), Expect = 1.175e-49 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS 573 +L+TN+ AGDV +VS+K S Sbjct: 168 VLVTNVAGAGDVRSVSIKGS 187
BLAST of DY260385 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.175e-49 Identity = 82/139 (58.99%), Postives = 100/139 (71.94%), Query Frame = 2 Query: 62 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCRRRGGIQ 478 A G GGW +A ATFY YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N CLPG+I VTATNFC GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG++ Sbjct: 18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVR 156 HSP 2 Score: 29.6462 bits (65), Expect = 1.175e-49 Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 477 RFTINGHSYFNQVV 518 RFT+NGHSYFN V+ Sbjct: 156 RFTVNGHSYFNLVL 169 HSP 3 Score: 26.9498 bits (58), Expect = 1.175e-49 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 514 LLITNLGAAGDVHAVSLKPS 573 +L+TN+ AGDV +VS+K S Sbjct: 168 VLVTNVAGAGDVRSVSIKGS 187 The following BLAST results are available for this feature:
BLAST of DY260385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260385 ID=DY260385; Name=DY260385; organism=Citrus clementina; type=EST; length=1270bpback to top |