DY260386

Overview
NameDY260386
Unique NameDY260386
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1302
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260386_ssr788 microsatellite DY260386_ssr788:788..797. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig405 contig Ccv1_Contig405:420..1721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: SET_DROME (Protein SET OS=Drosophila melanogaster GN=Set PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.064e-29
Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPF----LDDDGSMKI-TATSIKWKEGMGIPNGVNHEKKGNKRPLAEE--SFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P+FW+T+FI+HP +  +L EE+ +    L+ LEVE+F+D+KSGY I F+F  NPYFE+  LTK F        ++G     T+T IKWKEG  +   +  +  GNK+    E  +FF WFS     D  D + DE+AE+IK+DLWP PL Y+
Sbjct:   80 PNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKTFFDWFS-----DNTDPVNDEIAELIKDDLWPNPLQYY 226          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: SET_RAT (Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 6.004e-29
Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P+FW+T F++HP +  LL EED +   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WP PL Y+
Sbjct:   91 PNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 232          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: SET_MOUSE (Protein SET OS=Mus musculus GN=Set PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 6.004e-29
Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P+FW+T F++HP +  LL EED +   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WP PL Y+
Sbjct:   91 PNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 232          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: SET_HUMAN (Protein SET OS=Homo sapiens GN=SET PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 6.004e-29
Identity = 65/148 (43.92%), Postives = 89/148 (60.14%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIP--NGVNHEKKGNKRPLAE-ESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P+FW+T F++HP +  LL EED +   YL+ +EV +F+D+KSGY I F F  NPYFE+  L+K F  L++ G     +T IKWK G  +   +     K   KR   E ESFFTWF+D       D   DE+ E+IK+D+WP PL Y+
Sbjct:   92 PNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEF-HLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHS-----DAGADELGEVIKDDIWPNPLQYY 233          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL4_HUMAN (Testis-specific Y-encoded-like protein 4 OS=Homo sapiens GN=TSPYL4 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 7.860e-21
Identity = 54/145 (37.24%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+TAF +HP L  ++S +D  + RY+ +LEVE+ K  ++G    F F  NPYF +  L K +      G +   +T I+W  G      ++  ++GN  P    SFF WFSD    +      D +AEIIK +LWP PL Y+
Sbjct:  251 PGFWVTAFRNHPQLSPMISGQDEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYE-RRSSGRVVSLSTPIRWHRGQDPQAHIHRNREGNTIP----SFFNWFSDHSLLEF-----DRIAEIIKGELWPNPLQYY 385          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL2_HUMAN (Testis-specific Y-encoded-like protein 2 OS=Homo sapiens GN=TSPYL2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.987e-20
Identity = 54/145 (37.24%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+ AF++HP +  L++  D  IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P    H   GN+   A  SFF+WFS+    +      D +AEIIK DLW  PL Y+
Sbjct:  263 PGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQARRH---GNQD--ASHSFFSWFSNHSLPEA-----DRIAEIIKNDLWVNPLRYY 395          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL2_MOUSE (Testis-specific Y-encoded-like protein 2 OS=Mus musculus GN=Tspyl2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.901e-20
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+ AF++HP +  L+++ D  IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P   N      +     ESFF WFS+    +      D +AEIIK DLW  P+ Y+
Sbjct:  256 PGFWVKAFLNHPRISILINQRDRDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQAYNRRSHDTR-----ESFFNWFSNHSLPEA-----DRIAEIIKNDLWVNPVRYY 388          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL2_MACFA (Testis-specific Y-encoded-like protein 2 OS=Macaca fascicularis GN=TSPYL2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 5.095e-20
Identity = 54/145 (37.24%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+ AF++HP +  L++  D  IFRYL++L+V+D + +  GY +   F  NPYF +  + K F   +  G +   +T I+W  G   P    H   GN+   A  SFF+WFS+    +      D +AEIIK DLW  PL Y+
Sbjct:  263 PGFWVKAFLNHPRIPILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQ-RNRSGRLVSHSTPIRWHRGQE-PQARRH---GNQD--ASHSFFSWFSNHSLPEA-----DRIAEIIKNDLWVNPLRYY 395          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL4_MOUSE (Testis-specific Y-encoded-like protein 4 OS=Mus musculus GN=Tspyl4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.135e-19
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+TAF +HP L  ++S +D  + RY+ +LEVE+ K  + G    F F  NPYF +  L K +      G +   +T I+W  G      ++  ++GN  P    SFF WFSD    +      D +AEIIK +LW  PL Y+
Sbjct:  243 PGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEELKQPRVGCKFKFIFQSNPYFRNEGLVKEYE-RRSSGRVVSLSTPIRWHRGQEPQAHIHRNREGNTIP----SFFNWFSDHSLLEF-----DRIAEIIKGELWSNPLQYY 377          
BLAST of DY260386 vs. ExPASy Swiss-Prot
Match: TSYL1_MOUSE (Testis-specific Y-encoded-like protein 1 OS=Mus musculus GN=Tspyl1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.936e-19
Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 1
Query:    1 PDFWLTAFISHPALGELLSEEDHKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTFPFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEE--SFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPTPLTYF 435
            P FW+TAF +HP L  ++   D ++ RY++SLEV++ +  K+G    F F  NPYF +  + K +  +   G +   +T I W+ G        HE +   R   +   SFFTWFSD    ++     D +AEIIKEDLWP PL Y+
Sbjct:  218 PGFWMTAFRNHPQLSAMIRGRDAEMLRYVTSLEVKELRHPKTGCKFKFFFRRNPYFRNKLIVKEYE-VRSSGRVVSLSTPIIWRRG--------HEPQSFIRRNQDLICSFFTWFSDHSLPES-----DRIAEIIKEDLWPNPLQYY 350          
The following BLAST results are available for this feature:
BLAST of DY260386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SET_DROME2.064e-2944.08Protein SET OS=Drosophila melanogaster GN=Set PE=1... [more]
SET_RAT6.004e-2943.92Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2[more]
SET_MOUSE6.004e-2943.92Protein SET OS=Mus musculus GN=Set PE=1 SV=1[more]
SET_HUMAN6.004e-2943.92Protein SET OS=Homo sapiens GN=SET PE=1 SV=3[more]
TSYL4_HUMAN7.860e-2137.24Testis-specific Y-encoded-like protein 4 OS=Homo s... [more]
TSYL2_HUMAN2.987e-2037.24Testis-specific Y-encoded-like protein 2 OS=Homo s... [more]
TSYL2_MOUSE3.901e-2035.17Testis-specific Y-encoded-like protein 2 OS=Mus mu... [more]
TSYL2_MACFA5.095e-2037.24Testis-specific Y-encoded-like protein 2 OS=Macaca... [more]
TSYL4_MOUSE1.135e-1936.55Testis-specific Y-encoded-like protein 4 OS=Mus mu... [more]
TSYL1_MOUSE1.936e-1937.41Testis-specific Y-encoded-like protein 1 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YF09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260386 ID=DY260386; Name=DY260386; organism=Citrus clementina; type=EST; length=1302bp
CCTGACTTCTGGCTTACTGCCTTTATTAGTCATCCTGCTCTCGGTGAACT
TTTGAGTGAAGAGGATCACAAGATATTCAGGTACTTGAGCTCTCTGGAAG
TGGAGGATTTTAAAGATGTCAAATCAGGATACTCCATCACATTTAACTTC
TCCCCCAATCCCTATTTTGAGGATACCAAACTTACCAAGACTTTTCCCTT
CCTTGATGATGATGGTTCAATGAAAATTACTGCTACATCAATCAAATGGA
AAGAGGGCATGGGCATACCAAATGGAGTTAATCATGAGAAGAAAGGAAAC
AAGCGGCCATTGGCGGAAGAAAGCTTCTTTACCTGGTTCAGTGATACCCA
AGAGAAGGATACTATTGATGGTATCCAAGATGAGGTTGCAGAGATTATCA
AGGAGGATTTATGGCCCACTCCTCTCACTTATTTTAACAATGAAGCTGAT
GAAGAGGACTTTGAAGGCGATGAAGAGGGTAAAGAAGATGATGACTCTGA
ACATGATGAAGATGATCCAGAGGAACATGATGACCATAAACACGGAGCCG
ATGAAAGCAAATGAATTATCTTCATCTCCAACCCGACTCTCACCTACGTA
GGACGTCCATGCCTCTCCTACCTGGGCTACTGACCTTCGCTGGCCACCGC
CCGTCCGCTGACCCCACCTCGACCCCCTATTTACTAGCTGTTTATTTAAA
AAAAACCGGATCAGGCACCGACCTCCACCAGCAGTAGCCTATCATACTCC
TCTACTTCTCTCCGCCCTTTCCACCCTTTCTAGCTCGCTCTCTCTCTCAC
ATCCCTCTCGCCCTACCCTCCCTACCCTCCTCTCTTCTCTTCCTCCCTCT
CCCCCACTCTCTACCCCAATCTCCTCTCTTCACCCACAAAAACACCAGCT
TAACCCCTCGTCCTGCCCCCCCCATTAGCGCCTCCTACTCTTCGACCCAT
CCCTCCTGTCCCTTCTACCCCCCCCTACCACACCCACCCCACGGCCCCCA
CCTCACGACCTCACCCACCCTCGCTCACCTCCTCCGCAGACCGCCCCACT
CCTACCGCCCCCCTTCCTTCTTCCCTCCCCACCTCCCACCCCCCATACGC
ACCGTCCACCTACTCTCCTCCTCCCCCCCTCACCTCTGCCCCCCCCTCTC
TCACCTCCCTTGCTATTCTGTCCCACGCACCCCACGCTCGCCCGAATCTG
TCACCTCCACGCTGCCCCCCTCCTCCCCTGCGCTGCTCCAAACCCCTACA
TGCCCATCTCACCCCACGCGTCCCCCACCCTGCTCCATATCCCTATTTCC
CC
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