DY260391

Overview
NameDY260391
Unique NameDY260391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1299
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1508 contig Ccv1_Contig1508:1..1299. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.619e-26
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIPTARL 346
            Y IP GS V+VNVWA+ R+P  WKNP EF+P+RFL++    D +G++F  LPFG+GRRVC G  L   +V  ++++LLHHF W  P+G K   +D+SE  G+V     P+ A+ T RL
Sbjct:  381 YDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDV--DMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPRL 496          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.727e-26
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIPTARL 346
            Y IP GS V+VNVWA+ R+P  WK+PLEF+P+RFL++    D +G++F  LPFGSGRRVC G  L   +   +L +LLHHF W  PEGMK   +D+ E  G+V     P+ A+ + RL
Sbjct:  382 YDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDV--DMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAVVSPRL 497          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.727e-26
Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIP 334
            Y+IP  + ++VN+WAIHRNP  WK+P  F P+RF+ D ++ D++G NF  LPFGSGRR+C GI +   +V   L NLL+ F W LPEGMK   +DL E +G+V  K  PL  IP
Sbjct:  379 YNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM-DSQI-DYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIP 490          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.063e-26
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIP 334
            Y IP  + ++VN+WAIHRNP  WK+P  F P+RF+ D ++ D++G NF +LPFGSGRR+C GI +   +V   L NLL+ F W LPEGM+   +DL E +G+V  K  PL  IP
Sbjct:  379 YDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM-DNQI-DYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.375e-25
Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELG--DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKSEPLMAIPTARL 346
            Y IP GS + +NVWAI R+P AW +PLEF+P+RFL  GE    D RGN+F  +PFG+GRR+C G+ L  +MV  ++A L+H F W+L  G     L++ E +G+ L++++PL+  P  RL
Sbjct:  386 YFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRPRL 505          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.346e-25
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIP 334
            Y+IP  + ++VN+WAIHRNP  WK+P  F P+RF+ D ++ D++G NF  LPFGSGRR+C GI +   ++   L NLL+ F W LPEGM+   +DL E +G+V  K  PL  IP
Sbjct:  379 YNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM-DNQI-DYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIP 490          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.064e-25
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMK---LDLSEKFGIVLKKSEPLMAIPTARLSIS*LY 364
            Y IP G+ V VNVWA+ R+P+ W NPLE++P+RFL++    D +G++F  LPFG+GRRVC G  L   +V  ++ +LLHHF+W+LPEG +   +++ E  G+V     PL A+   RL    LY
Sbjct:  384 YDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENI--DIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVAKPRLEKEELY 505          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.915e-25
Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKSEPLMAIPTARL 346
            Y+IP G  V+VN  AI R+P+ WK+PL+FQP+RFL D ++ ++ G  F ++PFGSGRR+C G PLA +++  VLA+L+H F W LP+G+   KLD+ E F + L  ++PL  IP  R+
Sbjct:  372 YTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFL-DSDI-EYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI 487          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.915e-25
Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELG-DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLP-EGMKLDLSEKFGIVLKKSEPLMAIPTARLSI 352
            Y IP  + + VN+WAI R+PE W+NPLEF P+RFL       D RGN+F  +PFG+GRR+C G  +   MV ++L  L+H F W LP E ++L++ E FG+ L+K+ PL A+ T RL I
Sbjct:  383 YYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAMVTPRLPI 501          
BLAST of DY260391 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.164e-24
Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 2
Query:    2 YSIPHGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKSEPLMAIP 334
            Y IP G+ V VN WAI R+PE W NP EF+P+RFL+     D +G N+  +PFG+GRR+CVG+PL  +M+     +LLH F W LP  +    +++ E  GI  +K +PL  IP
Sbjct:  353 YDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKV--DVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
The following BLAST results are available for this feature:
BLAST of DY260391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
C98A3_ARATH3.619e-2648.31Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN4.727e-2649.15Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BC_ARATH4.727e-2650.88Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH8.063e-2650.00Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY1.375e-2546.67Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BD_ARATH2.346e-2549.12Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI3.064e-2545.16Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C80A1_BERST8.915e-2548.31Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C75A3_PETHY8.915e-2547.90Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C76A1_SOLME1.164e-2445.61Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YF15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260391 ID=DY260391; Name=DY260391; organism=Citrus clementina; type=EST; length=1299bp
GTATTCCATTCCCCATGGGTCAATAGTTTATGTTAATGTGTGGGCTATAC
ATAGGAATCCTGAGGCTTGGAAAAACCCCCTGGAGTTTCAACCGGACAGG
TTCCTAAAAGATGGTGAATTAGGTGATTTTCGAGGAAACAATTTCAATTA
TCTTCCATTTGGTTCGGGAAGGAGGGTCTGCGTTGGAATTCCTCTAGCAG
AAAAAATGGTACTTCATGTGTTAGCTAACCTATTGCATCATTTTAAGTGG
AATCTGCCAGAGGGAATGAAGCTTGATTTATCCGAGAAGTTTGGAATTGT
GTTGAAAAAATCAGAACCCCTCATGGCCATTCCAACTGCAAGATTATCCA
TTTCATAGCTTTACTATTAATGGTTTTCAAATAAATATTGCATCATGCTT
TGGCTCTGGAAGGAACTTGTTTTCCAGACTACTAATAAGTTGCTTTCTGC
AACAACTTCATCCTGCTGTACGAGCTTCCCAAATTTCCACCACAACCAAA
ACAGTCGTGTGCCCTTTTCACTTCCACCCAACCACACCCACCACCCCCCC
TTTCTCCTACACCTCGGCCTCCCTACTACTCTCTTGCTTTATACAAGCCT
TTCGCCCACCGCCCCGCCCCCACCCCCCAAATACAACCCTCCCCCGCCCC
CCACTACAACACCCACCGTACTCCTTTTTCACCCCCTCCCCAACCCCTCC
ATCGTCACCTCTATCTCCCGACCCCACCGCCCTGACCCTATTACCTCACC
CAAACCTCCCCAAACCCCTCCTCCCCCTCCACACACTATCCCATTACCCA
CGCTATACTTATTTCTCCCATACCTCACCACACCTCCACACACAACATAC
CATCCCTATACCTACTACCCCCTCCTCACACTTCCTACCTCCCCACCCCC
CCATCCCCCCGCCCCCATCCCCCCTCCCTCTCCCCCTCCTCCCCCCCACC
CCCCACCCCACCTCCCACCCCACACCCACAACACTCTATCTCCCAACCCC
CCCCCACCACACCCCTCACCAAATCCCCATCCGCCCCCCCCCATACCACC
ACCAACCCCCCAACTCCCCCCCCTCCTCTCCCTCCCCAACGTACCATACT
CACACCCCTCCACCTACTATCCCTCTCTCCCCTACCCGCACCACCAATAG
CACAACAAAATCCACCTCCCGCCATACACCCTACAACTACCCTCTCGTAC
CACCTCACCACTCTCTTCTTCCTACTCATACTATCGAATATCCTCCTTCA
CCTTCACACCTCATACACCGAAACAGGATACCAACCAAACGTTTTTACT
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