DY260395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.045e-46 Identity = 85/125 (68.00%), Postives = 98/125 (78.40%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 REVWA NLESEFELIS++ID YPFISMDTEFPG++++ D+ R P D Y +LK+NVDAL+LIQVGLTLSD +GNLPDLG + FIWEFNFRDFDVA DAHAPDSIE LR GI+F Sbjct: 20 REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDL--------RFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDF 136 HSP 2 Score: 39.2762 bits (90), Expect = 2.045e-46 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 1 Query: 532 RGLNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFHSS 657 +G++FERN +GV+S RF +LMMSSG + + VTFHS+ Sbjct: 132 QGIDFERNCRDGVESERFAELMMSSGLVCNEEVSW-VTFHSA 172
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.474e-46 Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 R+VWA NLESEF+LI +++ YPFISMDTEFPG++Y+ D+D R+ P+ Y +LKSNVDAL+LIQVGLTLSD+ GNLPDLG N ++IWEFNFRDFDV D HAPDSIE LR GI+F Sbjct: 15 RDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLD-----VLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDF 134 HSP 2 Score: 43.5134 bits (101), Expect = 3.474e-46 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1 Query: 535 GLNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFHSS 657 G++FERNR EGV+S RF +LMMSSG + + VTFHS+ Sbjct: 131 GIDFERNRREGVESERFAELMMSSGLICNESVSW-VTFHSA 170
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.682e-33 Identity = 66/126 (52.38%), Postives = 88/126 (69.84%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 REVW NLESE LI +V+D +PF++MDTEFPG+V RP T + HY+ LK+NV+ L +IQ+GLT SD GNLP G+ +NK+ IW+FNFR+FD+ +D +A DSIE LR +GI+F Sbjct: 13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY-------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT--DNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDF 129 HSP 2 Score: 35.4242 bits (80), Expect = 5.682e-33 Identity = 19/40 (47.50%), Postives = 26/40 (65.00%), Query Frame = 1 Query: 535 GLNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFHS 654 G++F +N E G+DS RF +L+MSSG + VTFHS Sbjct: 126 GIDFVKNNEFGIDSKRFAELLMSSG-IVLNENVHWVTFHS 164
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.214e-30 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 REVW NL EF LI +++D++ +I+MDTEFPG+V +P +T Y +Y+ LK NVD L LIQVGLT SD +GNLP G+ +KF IW+FNFR+F++ D +A +SIE LR GI+F Sbjct: 13 REVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP---VATFKYNNDL----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT---DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDF 128 HSP 2 Score: 37.3502 bits (85), Expect = 3.214e-30 Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 535 GLNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFH 651 G++F++N E+G+D VRF +LMMSSG + + VTFH Sbjct: 125 GIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISW-VTFH 162
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.835e-28 Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIE 542 REVW NLE E LI Q ID +P+++MDTEFPG+V + +P+ PY + +Y LK+NV+ L LIQ+GLTLSD GNLP G+ N + IW+FNFR+F+V +D A DSIE LR + I+ Sbjct: 17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYE--YNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT--NKQCIWQFNFREFNVISDMFALDSIELLRKSAID 137 HSP 2 Score: 30.0314 bits (66), Expect = 4.835e-28 Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 1 Query: 538 LNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFH 651 ++ E+N E GVD+ RF +L+M SG + + VTFH Sbjct: 136 IDLEKNNECGVDAKRFAELLMGSGVVLND-KIHWVTFH 172
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.068e-27 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIE 542 REVW NL+ E +LI V+D +P+++MDTEFPG+V RP S Y HY+ LK+NV+ L +IQ+GLT S+ GNLP G+ + IW+FNFR+FD+ +D A DSIE L+ +GI+ Sbjct: 13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY--------HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT--DKYCIWQFNFREFDLDSDIFALDSIELLKQSGID 127 HSP 2 Score: 31.9574 bits (71), Expect = 1.068e-27 Identity = 17/40 (42.50%), Postives = 25/40 (62.50%), Query Frame = 1 Query: 535 GLNFERNREEGVDSVRFPKLMMSSGPLPQPVREFGVTFHS 654 G++ +N +G+DS RF +L+MSSG + VTFHS Sbjct: 125 GIDLAKNTLDGIDSKRFAELLMSSG-IVLNENVHWVTFHS 163
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.996e-22 Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 R+VW++NL+ E LI +I+RYP +SMDTEFPG+V RP V S+ Y HY+ L++NVD+L +IQ+GL LSD GN P W+FNF F++ D +AP+SIE L +GI+F Sbjct: 23 RDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDY--------HYQTLRANVDSLKIIQIGLALSDEEGNAP------VEACTWQFNF-TFNLQDDMYAPESIELLTKSGIDF 133
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: POP2_YEAST (Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae GN=POP2 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.307e-20 Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 171 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 R+VW SNL SEF +I Q++ +Y +S+ TEF G + RP FR K HY+ +++NVD LN IQ+GL+LSD++GN PD N W+FNF +FD + + +S+E LR +GI F Sbjct: 161 RDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGT------FRS-KVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPD-----NGPSTWQFNF-EFDPKKEIMSTESLELLRKSGINF 272 HSP 2 Score: 29.261 bits (64), Expect = 1.307e-20 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 535 GLNFERNREEGVDSVRFPKLMMSSG 609 G+NFE++ G+D F +L+M SG Sbjct: 269 GINFEKHENLGIDVFEFSQLLMDSG 293
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.351e-18 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 174 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIE L T+GI+F Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 123
BLAST of DY260395 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 3.351e-18 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 174 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIEPLRTAGIEF 545 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIE L T+GI+F Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 123 The following BLAST results are available for this feature:
BLAST of DY260395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260395 ID=DY260395; Name=DY260395; organism=Citrus clementina; type=EST; length=1222bpback to top |