DY260396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3) HSP 1 Score: 216.083 bits (549), Expect = 8.342e-62 Identity = 111/156 (71.15%), Postives = 130/156 (83.33%), Query Frame = 1 Query: 193 KKSDLTLVSKIPFPCLRRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVN 660 KKSDL ++ K+P+ L+ L+N+QEVILGTKL++LFPAIP II G ++PW+F LSLLGLTPLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL K+ VVKYSLLGSI NLLLVLGTSLFC IAN+ +EQ+ RKQA+VN Sbjct: 44 KKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQADVN 199 HSP 2 Score: 43.8986 bits (102), Expect = 8.342e-62 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 3 Query: 93 TEPW-LMENGSVKVLNK----EIRHGKTAHNMSSSSLRKK 197 TEPW + ENG+ + K E+R G+TAHNMSSSSLRKK Sbjct: 6 TEPWSVAENGNPSITAKGSSRELRLGRTAHNMSSSSLRKK 45
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.576e-52 Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 1 Query: 193 KKSDLTLVSKIPFPCLRRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVN 660 KKSDL LV K+P L+ L+N+QEVILGTKL++LF AIPL I+ + + P +F LSL+GLTPLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL K+ VVKYSLLGSI NLLLVLGTSLF IAN+ +EQ+ RKQA+VN Sbjct: 44 KKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVN 199
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.511e-52 Identity = 109/157 (69.43%), Postives = 122/157 (77.71%), Query Frame = 1 Query: 193 KKSDLTLVSKIPFPCLRRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 KKSD LV K+P LR LAN+QEV L TKL+VLFPA+PL I QCF F + WVF LSLLGL PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL KI+VVK SLLGS+ NLLLVLGTSLFC + NL Q R Q++V++ Sbjct: 35 KKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVST 191
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 3.075e-48 Identity = 98/157 (62.42%), Postives = 122/157 (77.71%), Query Frame = 1 Query: 193 KKSDLTLVSKIPFPCLRRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 K+SDL L+S++ + +RR L N+QEV+LGTKL +LFPA+PL ++ + WVF LSLLGLTPLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ RK+ +VK SLLGSI NLL VLGTSLF I+NL K Q +Q ++NS Sbjct: 45 KRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNS 201
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 7.839e-44 Identity = 98/157 (62.42%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 193 KKSDLTLVSKIPFPCLRRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 K SD +L+ K+P LR LAN+ +V+L T+L +LFPA+ L I F + WVF LSL+GL PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL KI+VVK SLLGSI NLLLVLGTSLF IANL Q KQA VN+ Sbjct: 43 KSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNT 199
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.606e-36 Identity = 81/147 (55.10%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 232 PCLRRCL----ANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVN 660 P LRR L A +QEV+LGTKL LF A+PL + + WVF SL+GL PLAERVSFL+E IA GPT GG++NATCGN ELIIA+FAL+ K++++K+SLLGSI NLLLVLG+SL I N+ KE+ ++QA+V+ Sbjct: 59 PLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVS 205
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 9.303e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 1 Query: 241 RRCLANIQEVILGTKLSVLFPAIPLTIIGQCFGFA-EPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 RR L +++ VIL K++VL P PL ++ + WVF SL+G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL I VV+ SLLGSI N+LLVLG + F + + ++Q ++ A VNS Sbjct: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNS 199
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.072e-28 Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 1 Query: 250 LANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 L + + VIL KL++L P PL I+ + W+F LSL+G+TPLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL I VV+ +LLGSI N+LLVLG + FC + KEQ + A VNS Sbjct: 65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVVNS 202
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.072e-28 Identity = 73/138 (52.90%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 250 LANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 L +I+ VI KL++L P PL I+ ++ WVF L+L+G+TPLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL I VV+ +LLGSI N+LLVLG + FC + K+Q + A VNS Sbjct: 65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNS 202
BLAST of DY260396 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 5.105e-27 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 1 Query: 250 LANIQEVILGTKLSVLFPAIPLTIIGQCFGFAEPWVFTLSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALY*RKIDVVKYSLLGSIPPNLLLVLGTSLFCERIANLIKEQKSHRKQAEVNS 663 L +I+ VI +KL++L P P +II VF S+LG+TPLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL I VV+ SLLGSI N+LLV+G + F I + K+Q + A VNS Sbjct: 41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNS 178 The following BLAST results are available for this feature:
BLAST of DY260396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260396 ID=DY260396; Name=DY260396; organism=Citrus clementina; type=EST; length=1209bpback to top |