DY260401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 5.959e-86 Identity = 159/228 (69.74%), Postives = 179/228 (78.51%), Query Frame = 3 Query: 21 LALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQ--------------------------PERTTGVAFRGRSYRLSD 626 +AL +LV +FQ+WRLITN FFLG FSINFGIRLLMIARYGV LEKGPFERRTADFLWMMIFG+ +LLVLS IP F + FLG+SLVFML+Y+WSREFPN+ I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGIIAGHLYYFLTVLHPLATGKN LKTPKWV K+VARWRIGAP + Q P ++ AFRGRSYRL+D Sbjct: 39 IALIPELVLKQFQIWRLITNLFFLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFLGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGGGAYSSARAPPESSNTAFRGRSYRLTD 266
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 2.865e-80 Identity = 148/209 (70.81%), Postives = 169/209 (80.86%), Query Frame = 3 Query: 3 LLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP--ERTTGVAFRGRSYRLS 623 +L+ LAL Y VF KFQ+WRL T+FFFLG FSINFGIRLLMIARYGV LEKG FE+RTADFLWMMIFGA+SLL LSAIP YFLG+ +V ML+YVWSRE+PNSQI++YGLV L++FYLPWAML LDVIFGS ++P LLGI+ GH YYFL+VLHPLATGKN LKTP WV K+VAR+RIG A +P T AFRGRSYRLS Sbjct: 33 ILNPPFLALYYPFVFKKFQIWRLFTSFFFLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLLALSAIPFLDIYFLGVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGHTYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRLS 241
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 4.573e-78 Identity = 145/205 (70.73%), Postives = 170/205 (82.93%), Query Frame = 3 Query: 21 LALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQPERT----TGVAFRGRSYRLS 623 L L+Y LVF KF++WRL+T+FFFL FS+ FGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP+F S+FLGI +V ML+YVWSRE PN+QINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GHLYYF VLHPLATGK+ LKTPKWV K+VAR+RIG A + +P +GV FRGRSYRL+ Sbjct: 39 LYLDYPLVFKKFEIWRLLTSFFFLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSIIPLFNSFFLGIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGHLYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV-FRGRSYRLN 242
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 5.973e-78 Identity = 148/211 (70.14%), Postives = 168/211 (79.62%), Query Frame = 3 Query: 3 LLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIG----APAINRAQPERTTGVAFRGRSYRLS 623 +L+ L L Y VF KF+VWR+ T+FFFLG FSINFGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP +Y LG+ +V MLVYVWSRE PN+QINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GHLYY+ VLHPLATGKN LKTPKWV K+VAR+RIG AP A TG AFRGRSYRL+ Sbjct: 33 ILNPLFLYLYYPRVFKKFEVWRIFTSFFFLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSVIPQLNTYVLGLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGHLYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTG-AFRGRSYRLN 242
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.260e-35 Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 3 Query: 39 LVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 530 LVF KFQVWRLITNF F G +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L MLVYVWSR P ++N +GL+T +A +LPWA++ L ++ G+ ++ DLLGI GH+YYFL + P GK LL TP +++ L+ Sbjct: 47 LVFRKFQVWRLITNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALTAMLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYFLEDVFPNQPGGKRLLLTPSFLKLLL 209
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.646e-35 Identity = 74/165 (44.85%), Postives = 109/165 (66.06%), Query Frame = 3 Query: 39 LVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 530 LVF KFQVWRL+TNF F G +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L+ MLVYVWSR P ++N +GL+T +A +LPWA++ ++ G+ ++ DLLGI GH+YYFL + P GK LL+TP +++ L+ Sbjct: 47 LVFRKFQVWRLVTNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYFLEDVFPNQPGGKRLLQTPGFLKLLL 209
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.646e-35 Identity = 74/175 (42.29%), Postives = 105/175 (60.00%), Query Frame = 3 Query: 21 LALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLV 530 L L + LVF K++ WRL TNFFF +NF + + R+ LE+ F R+AD+L+M IFG+ LL++ A + + FL S+ FM++YVWSR PN I+ GL T A YLPW +L + +F L DLLG +AGH YYFL +PL + + LLKTP +++ L+ Sbjct: 40 LYLNFPLVFGKYEFWRLFTNFFFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLLLIMDAFLFYTKIVTKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNLM 214
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.179e-33 Identity = 73/165 (44.24%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 39 LVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 530 LVF KFQVWRLIT F F G F +L + RY LE+G F R ADF++M +FG + + +L + +FLG +L+ MLVYVWSR P+ ++N +GL+ +A +LPWA++ ++ G+ +V DLLGI+ GH+YYFL + P GK LL TP ++ L+ Sbjct: 47 LVFRKFQVWRLITTFLFFGPLGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSL--FFLGQALMAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYFLEDVFPNQPGGKRLLLTPSVLKLLL 209
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.540e-33 Identity = 71/167 (42.51%), Postives = 106/167 (63.47%), Query Frame = 3 Query: 21 LALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLAT-GKNLLKTPKWV 518 L ++L+ K+Q WRLIT+F F G+F +F ++ RY + LE+G F R ADF++M +FGA+ L++LS I + + FLG + MLVY+WSR P Q+N +G++T A YLPW +L ++ G+ V D +GI GH+Y+FL + P GK LKTP+W+ Sbjct: 39 LYFNWELIIRKYQFWRLITSFCFFGSFGFSFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAV-LMILSGIFV-QILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLKTPQWL 203
BLAST of DY260401 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 3.431e-33 Identity = 76/180 (42.22%), Postives = 105/180 (58.33%), Query Frame = 3 Query: 21 LALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 533 L L KLV +++WRL+TNF + ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 40 LYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219 The following BLAST results are available for this feature:
BLAST of DY260401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260401 ID=DY260401; Name=DY260401; organism=Citrus clementina; type=EST; length=1162bpback to top |