DY260403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.582e-49 Identity = 89/121 (73.55%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 M RGK+++KRIEN TNRQVT+SKRRNGLFKKA ELT+LCDAKVSI++ SST K HE+ISPS TTKQL DLYQKT+ VDLW+SHYEKM E L +++VNR L+K+IRQRMGESLNDL E+L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQL 121 HSP 2 Score: 33.113 bits (74), Expect = 8.582e-49 Identity = 16/34 (47.06%), Postives = 24/34 (70.59%), Query Frame = 2 Query: 578 LEQDILDGLKIIRECKDQVLARQINTFQKKVTGV 679 L +++ + LK+IRE K +V+ QI TF+KKV V Sbjct: 124 LMENVDNSLKLIRERKYKVIGNQIETFKKKVRNV 157
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.917e-46 Identity = 85/121 (70.25%), Postives = 103/121 (85.12%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 M RGK+++KRIEN TNRQVT+SKRRNGLFKKA EL++LCDAKVSI++ SST K HEYISP+T TKQL D YQK + VDLWSSHYEKM E+L + +VNR L+++IRQRMGESLNDL E++ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQI 121 HSP 2 Score: 31.5722 bits (70), Expect = 2.917e-46 Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 2 Query: 578 LEQDILDGLKIIRECKDQVLARQINTFQKKVTGV 679 L +D+ + LK+IRE K +V++ QI+T +KKV V Sbjct: 124 LIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNV 157
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.025e-36 Identity = 73/121 (60.33%), Postives = 99/121 (81.82%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 M RGK+++KRIEN TNRQVT+SKRRNGLFKKA ELT+LCDA+VSI++ SS+ K HEYISP+TTTK+++DLYQ VD+W++ YE+M E + + NR L+ QI+QR+GE L++L ++EL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQEL 121
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 2.919e-36 Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTG 576 MGRGK+E+KRIENATNRQVT+SKRR G+ KKARELT+LCDA+V+I++ SST K HE+ SPST K + D YQ+ + LW YE M L ++ +NR L+ +IRQRMGE L+ L +EL G Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRG 123 HSP 2 Score: 26.5646 bits (57), Expect = 2.919e-36 Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 2 Query: 578 LEQDILDGLKIIRECKDQVLARQINTFQKKV 670 LEQ++ LK +R K V+ Q T++KKV Sbjct: 124 LEQNVDAALKEVRHRKYHVITTQTETYKKKV 154
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.264e-33 Identity = 69/122 (56.56%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELT 573 MGRGK+E+++IEN TNRQVTFSKRRNG+ KKA+ELT+LCDAKVS+L+ SST K H Y+SP + K++ D YQK VDLW +E+M E V ++N +L+++I +RMG L LTL EL+ Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELS 122
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.704e-29 Identity = 61/121 (50.41%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 MGRGK+E+KRIEN++NRQVT+SKRRNG+ KKA+E+T+LCDAKVS++I ++ K HEY SPSTT +LD YQKT LW + +E + + +++ N ++ ++R GE +N L +EL Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKEL 121
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.798e-26 Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 MGRGK+E+KRIEN++NRQVT+SKRRNG+ KKA+E+++LCDA VS++I +S+ K HE+ SPSTT +LD Y K LW +E + + V++ N ++ ++R GE + L +EL Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKEL 121
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.369e-25 Identity = 55/121 (45.45%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 MGRGK+E+KRIEN+TNRQVTFSKRR+G+ KKARE+++LCDA+V ++I SS K ++Y SP T+ ++L+ YQ LW ++ + + +++ N ++ ++R GE LN L +EL Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKEL 121
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.040e-25 Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 MGRGK+E+KRIENA NR VTFSKRRNGL KKA+E+T+LCDAKV+++I +S K +Y PS +LD YQK LW + +E + + +++ N L+ ++R GE + L L+ L Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNL 121
BLAST of DY260403 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.834e-24 Identity = 57/121 (47.11%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 208 MGRGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRVDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEEL 570 MGRGK+E+KRIEN TNRQVTFSKRR GL KKA EL++LCDA++ ++I SS+ K EY S S++ K++++ YQK + + + + ++ N L+ IR+ MGE L LT+ EL Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTEL 121 The following BLAST results are available for this feature:
BLAST of DY260403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260403 ID=DY260403; Name=DY260403; organism=Citrus clementina; type=EST; length=1306bpback to top |