DY260404

Overview
NameDY260404
Unique NameDY260404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1323
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1517 contig Ccv1_Contig1517:1..1323. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.458e-40
Identity = 86/157 (54.78%), Postives = 115/157 (73.25%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEE 518
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV G   EA+  E
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV-GNFDEASKNE 156
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.458e-40
Identity = 86/157 (54.78%), Postives = 115/157 (73.25%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEE 518
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   E++DD+VPELV G   EA+  E
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKASKPEDIEEEDDDVPELV-GNFDEASKNE 156
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_BOVIN (Transcription factor BTF3 homolog 4 OS=Bos taurus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.314e-39
Identity = 83/160 (51.88%), Postives = 118/160 (73.75%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++ T  P   ++++D+VP+LV  E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKTPKPEDIDEEEDDVPDLV--ENFDEASKNEAN 158
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_PONAB (Transcription factor BTF3 homolog 4 OS=Pongo abelii GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.716e-39
Identity = 83/160 (51.88%), Postives = 117/160 (73.12%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNEAN 158
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_MOUSE (Transcription factor BTF3 homolog 4 OS=Mus musculus GN=Btf3l4 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.716e-39
Identity = 83/160 (51.88%), Postives = 117/160 (73.12%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNEAN 158
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.716e-39
Identity = 83/160 (51.88%), Postives = 117/160 (73.12%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++    P   +++DD+VP+LV  E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV--ENFDEASKNEAN 158
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 2.928e-39
Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV  E F+ A++ + +
Sbjct:   48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV--ENFDEASKNEAN 204
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.928e-39
Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE   KQ+ + G     T EDDDDEVP+LV  E F+ A++ + +
Sbjct:   50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVD-GKAPLATGEDDDDEVPDLV--ENFDEASKNEAN 206
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 6.522e-39
Identity = 84/160 (52.50%), Postives = 117/160 (73.12%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF +Q  +         +++DD+VP+LV  E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNKAPKAEDIDEEDDDVPDLV--ENFDEASKNEAN 158
[Close]
BLAST of DY260404 vs. ExPASy Swiss-Prot
Match: BT3L4_CHICK (Transcription factor BTF3 homolog 4 OS=Gallus gallus GN=BTF3L4 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.228e-38
Identity = 81/160 (50.62%), Postives = 115/160 (71.88%), Query Frame = 3 
Query:   51 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELVAGETFEAAAEEKTD 527
            MN EKL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ KDD  VI F NPKVQAS++ANT+ ++G  + K + ++LPGI++QLG D+L +LRKLAEQF +Q  ++        +++DD+VP+L   E F+ A++ + +
Sbjct:    1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKSEDIDEEDDDVPDL--AENFDEASKNEAN 158
The following BLAST results are available for this feature:
BLAST of DY260404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BT3L4_XENTR3.458e-4054.78Transcription factor BTF3 homolog 4 OS=Xenopus tro... [more]
BT3L4_XENLA3.458e-4054.78Transcription factor BTF3 homolog 4 OS=Xenopus lae... [more]
BT3L4_BOVIN1.314e-3951.88Transcription factor BTF3 homolog 4 OS=Bos taurus ... [more]
BT3L4_PONAB1.716e-3951.88Transcription factor BTF3 homolog 4 OS=Pongo abeli... [more]
BT3L4_MOUSE1.716e-3951.88Transcription factor BTF3 homolog 4 OS=Mus musculu... [more]
BT3L4_HUMAN1.716e-3951.88Transcription factor BTF3 homolog 4 OS=Homo sapien... [more]
BTF3_MOUSE2.928e-3954.38Transcription factor BTF3 OS=Mus musculus GN=Btf3 ... [more]
BTF3_HUMAN2.928e-3954.38Transcription factor BTF3 OS=Homo sapiens GN=BTF3 ... [more]
BT3L4_DANRE6.522e-3952.50Transcription factor BTF3 homolog 4 OS=Danio rerio... [more]
BT3L4_CHICK4.228e-3850.63Transcription factor BTF3 homolog 4 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YG06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260404 ID=DY260404; Name=DY260404; organism=Citrus clementina; type=EST; length=1323bp
CTTCTTCTTCACCCCATTCTTTGTCCCCACACAAAAACCCTAGCTCCAAG
ATGAATGTGGAGAAGCTAATGAAGATGGCCGGTGCAGTTCGCACTGGTGG
TAAGGGTAGTGTGAGAAGAAAGAAGAAGGCTGTTCATAAGACAACAACCA
CCGATGACAAGAGGCTTCAGAGCACCTTGAAGAGAATAGGAGTGAATGCT
ATTCCTGCAATTGAGGAAGTTAACATTTTCAAGGATGACGTCGTTATTCA
GTTCTTAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACACATGGGTAG
TTAGTGGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTCCCTGGAATT
ATCAATCAATTGGGGCCAGATAATTTGGACAACCTGAGGAAGTTGGCGGA
GCAGTTTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCACCCACGACTC
AAGAGGACGACGACGATGAGGTCCCAGAGCTTGTGGCAGGCGAGACGTTT
GAAGCTGCCGCAGAGGAGAAAACAGACAAAACCTGACCCGCTTCTTACAC
AATTTTATCTAGAGGGACTCTGAGTAATTCCAAACAATTCCCATGGTTTT
TTGCGTTTAAACTTTACCTTTACCAGCCCAACCTCTCCCTAGTTCAATCA
CGAGTATCCTCGGTCCCCAAGCAAATTAGTTCCCCTTTCGATATCCCTGT
CTCCCCCCCCCTCCACCTCCCGTTCAGACCCACCCAACCACCCCACCACC
CTCCCCCCTCCCCCTACTCCAAAGCTAACACCCCTACACTCCTCTCCACC
AACTACCCCAATTCCCCCTACCACCCACACTACACCCCCACCATCCCACC
CCCACTCCACTCCTCACCACTCCTCTATCCCCCTCCTCGCCCGTCCCGTA
CGCGCTCCTCCCCCTCTCGTGCTCCTGCCACACCCCACCCTCCCAACTCT
CGCTTACACCCACCACCCATACCCGCCCCCCTTACTAACATATCCATACT
GATCTTACCACGCCCCGCCATCCCCCTCTTTCCCTCTTTTCCTCAGAACA
TTTCACCACCCCCACACGATTTCACCCTAGCGCCCACTATAAACACAACT
TAGCACACCACATACCCCCCCCTTCCCCCACCAAACGCATAACCCAACCT
CAATCTATTACTCCATGCACAATCAACAACAACCCCCCCCCACACCAGAC
CGTACCCTCATCTTTAGCCACCCCATCATCCCCCCTACGTACCTCCCACC
GTCAACCTTCTCGCACTCCCCCAAACTCATTTAATAGAAAACAACACGTA
AATGCACTCCTGCTGATGACAGT
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