DY260452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260452 vs. ExPASy Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.848e-14 Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 213 SGDKIKLPPSCFTELSGQGAFDKGPLHFKLSVLHQEGPSNMVDGEKESNRSTHSGVLEFTADEGFVGLPPHVWRNLFPSDTPNNSFVEVRYVRLPKGTYAKLQPEGIGCAELPNLKAVVETSLPQHATLSQDDVLPVNYGEWACKLKSP*VETLLRLSVLGIDI 704 SG KI LPPS LS + P+ F++S N + G+K +H GVLEF A+EG LP + +NL F++++ L KGT+ K+QP ++ N KAV+E SL + ATL++DD + ++Y LK ++ +S++ D+ Sbjct: 46 SGGKILLPPSALNALSRLNI--QYPMLFEIS--------NPISGKK-----SHCGVLEFIAEEGICYLPLWMMQNL---QLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADV 191
BLAST of DY260452 vs. ExPASy Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.120e-13 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 216 GDKIKLPPSCFTELSGQGAFDKGPLHFKLSVLHQEGPSNMVDGEKESNRSTHSGVLEFTADEGFVGLPPHVWRNLFPSDTPNNSFVEVRYVRLPKGTYAKLQPEGIGCAELPNLKAVVETSLPQHATLSQDDVLPVNYGEWACKLK 653 G KI +PPS +LS P+ FKL+ K S+R TH GVLEF ADEG LP + +NL + V+V V L TY+K QP+ ++ N KAV+E +L A L+ DV+ +NY E +L+ Sbjct: 43 GGKIIMPPSALDQLSRLNI--TYPMLFKLT-------------NKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEE---GGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 170
BLAST of DY260452 vs. ExPASy Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.120e-13 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 216 GDKIKLPPSCFTELSGQGAFDKGPLHFKLSVLHQEGPSNMVDGEKESNRSTHSGVLEFTADEGFVGLPPHVWRNLFPSDTPNNSFVEVRYVRLPKGTYAKLQPEGIGCAELPNLKAVVETSLPQHATLSQDDVLPVNYGEWACKLK 653 G KI +PPS +LS P+ FKL+ K S+R TH GVLEF ADEG LP + +NL + V+V V L TY+K QP+ ++ N KAV+E +L A L+ DV+ +NY E +L+ Sbjct: 43 GGKIIMPPSALDQLSRLNI--TYPMLFKLT-------------NKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEE---GGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 170
BLAST of DY260452 vs. ExPASy Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.910e-13 Identity = 52/146 (35.62%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 216 GDKIKLPPSCFTELSGQGAFDKGPLHFKLSVLHQEGPSNMVDGEKESNRSTHSGVLEFTADEGFVGLPPHVWRNLFPSDTPNNSFVEVRYVRLPKGTYAKLQPEGIGCAELPNLKAVVETSLPQHATLSQDDVLPVNYGEWACKLK 653 G KI +PPS +LS P+ FKL+ K S+R TH GVLEF ADEG LP + +NL + V+V V L TY+K QP+ ++ N KAV+E +L A ++ DV+ +NY E +L+ Sbjct: 43 GGKIIMPPSALDQLSRLNI--TYPMLFKLT-------------NKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEE---GGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACMTTGDVIAINYNEKIYELR 170
BLAST of DY260452 vs. ExPASy Swiss-Prot
Match: UFD1_YEAST (Ubiquitin fusion degradation protein 1 OS=Saccharomyces cerevisiae GN=UFD1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.048e-11 Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 216 GDKIKLPPSCFTELSGQGAFDKGPLHFKLSVLHQEGPSNMVDGEKESNRSTHSGVLEFTADEGFVGLPPHVWRNLFPSDTPNNSFVEVRYVRLPKGTYAKLQPEGIGCAELPNLKAVVETSLPQHATLSQDDVLPVNYGEWACKLK 653 G KI LPPS ++LS + P+ FKL+ E+ R TH GVLEF A+EG V LP + L S +++ +P G + KL+P+ + ++ + KAV+E L +TL+ DDV+ ++Y K+K Sbjct: 45 GGKIFLPPSALSKLSMLNI--RYPMLFKLTA-------------NETGRVTHGGVLEFIAEEGRVYLPQWMMETL---GIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIK 172 The following BLAST results are available for this feature:
BLAST of DY260452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260452 ID=DY260452; Name=DY260452; organism=Citrus clementina; type=EST; length=1225bpback to top |