DY260488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_ARATH (Lysyl-tRNA synthetase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 3.850e-57 Identity = 128/243 (52.67%), Postives = 152/243 (62.55%), Query Frame = 2 Query: 23 MEGSVDETAKAVSNLAVDSSSSDPAAGEETISKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPQ--SQKP-AADDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSH-MNA*GKNLGGNKPNV 739 MEG+ D+T KA+S LA+DSS++ AA +P+ SQK AADDE+MD TQY ENR +YL +K +G+NPYPHKF VSMSI +YI YG L NGDH+E+ SLAGRIMSKRSSSSKLFFYDLHG KVQVMADASKS +DE EF K H++ KRGDIVGV GFPGKTKRGE FP+SF++LS C H M N+ KP + Sbjct: 1 MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDEEKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNAKRGDIVGVIGFPGKTKRGEL-SIFPRSFILLSHCLHMMPRKADNVNAKKPEI 242
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_ORYSJ (Lysyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.373e-46 Identity = 93/165 (56.36%), Postives = 119/165 (72.12%), Query Frame = 2 Query: 239 QKPAADDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHMNA*GKNLGGNKP 733 ++ AADDE+MDPTQY ENR + L+ K G NPYPHKF ++++ +YI Y + GD L D++ LAGRIM+KR+ SSKL FYDL+GGG KVQV ADA S++++ EF KFH+++KRGDIVGV G+PGK+KRGE FPK VVLSPC HM K+ G P Sbjct: 68 KESAADDEEMDPTQYYENRLKALDSLKATGVNPYPHKFLANITVADYIEKYKSMNVGDKLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSELEDNEFIKFHSTLKRGDIVGVCGYPGKSKRGEL-SIFPKKIVVLSPCLHMMPRQKSEGSAVP 231
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_SOLLC (Lysyl-tRNA synthetase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.982e-45 Identity = 87/148 (58.78%), Postives = 116/148 (78.38%), Query Frame = 2 Query: 254 DDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHM 697 +++D+DPTQYL NR R +E ++ G NPYPHKFF++MSI E+I+ Y L G+ EDI +SLAGR++SKR+SSSKL+FY+L GGGA+VQV+A A SD+D V+FS + + VKRGDI+GV G+PGK+KRGE F K F+VL+PC HM Sbjct: 48 ENDDLDPTQYLANRLRNIESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPEDIDMSLAGRVISKRASSSKLYFYELLGGGARVQVLASARDSDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRGEL-SIFAKPFIVLAPCLHM 194
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_MOUSE (Lysyl-tRNA synthetase OS=Mus musculus GN=Kars PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.513e-32 Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 2 Query: 251 ADDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHM 697 A++E +DP QY + R + ++ K G++PYPHKF V +S+ ++I Y L GDHL D+++ +AGRI +KR+S KL FYDL G G K+QVMA+ S++ E EF + ++RGDI+GV G PGKTK+GE P+ +LSPC HM Sbjct: 64 AEEETLDPNQYYKIRSQAVQQLKVTGEDPYPHKFHVDISLTQFIQEYSHLQPGDHLTDVTLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN-SRNYKSEEEFVHINNKLRRGDIIGVEGNPGKTKKGEL-SIIPQEITLLSPCLHM 210
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_CRIGR (Lysyl-tRNA synthetase OS=Cricetulus griseus GN=KARS PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 5.599e-32 Identity = 70/148 (47.30%), Postives = 98/148 (66.22%), Query Frame = 2 Query: 254 DDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHM 697 ++E +DP QY + R + + K G++PYPHKF V +S+ ++I Y L GDHL DI++ +AGRI +KR+S KL FYDL G G K+QVMA+ S++ E EF + + ++RGDI+GV G PGKTK+GE P +LSPC HM Sbjct: 67 EEETLDPNQYYKIRSQAIHQLKVSGEDPYPHKFHVDISLTQFIQEYSQLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN-SRNYKSEEEFVRINNKLRRGDIIGVQGNPGKTKKGEL-SIIPYEITLLSPCLHM 212
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_HUMAN (Lysyl-tRNA synthetase OS=Homo sapiens GN=KARS PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 1.247e-31 Identity = 70/148 (47.30%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 254 DDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHM 697 ++E +DP QY + R + + K G++PYPHKF V +S+ ++I Y L GDHL DI++ +AGRI +KR+S KL FYDL G G K+QVMA+ S++ E EF + ++RGDI+GV G PGKTK+GE P +LSPC HM Sbjct: 67 EEESVDPNQYYKIRSQAIHQLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN-SRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGEL-SIIPYEITLLSPCLHM 212
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYKC_SCHPO (Lysyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=krs1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.567e-29 Identity = 64/152 (42.11%), Postives = 102/152 (67.11%), Query Frame = 2 Query: 257 DEDMDPTQYLENRKR-YLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTK---RGEP*PS-FPKSFVVLSPCSHM 697 +ED+DP+QY ENR R +E+++ + NPYPHKF V++++ E+IA Y GL G+ ++ V++AGR++ R++ +KL FY++H G K+QVM A D D V+F+ H ++RGDI+G+ G+PG++ R + S F + V+LSPC M Sbjct: 67 EEDLDPSQYFENRSRTIMELRQTKDPNPYPHKFQVTITLPEFIAKYEGLARGETKPEVEVAVAGRVLGLRTAGNKLRFYEIHADGKKLQVMCQA--QDADTVDFAAQHEHLRRGDIIGIRGYPGRSNPKGRADGELSIFARQCVLLSPCLRM 216
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_CAEEL (Lysyl-tRNA synthetase OS=Caenorhabditis elegans GN=krs-1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.152e-27 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 2 Query: 242 KPAADDEDMDPTQYLENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLSPCSHM 697 K + + DP +Y R R +E ++ G NP+PHKF V++S+ ++I Y L +E+I VS+AGRI SKR S SKL FYD+HG G +Q+MA+A K +V+F H +KRGDIVG TG +TK GE P + L+PC HM Sbjct: 43 KVVREADPSDPQEYFNMRVRMIEARRAAGDNPFPHKFNVTISLTDFITKYTPLEKEQVVEEI-VSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANA-KFHTGDVDFVTLHDRIKRGDIVGFTGRATRTKAGEL-SLIPNEILQLTPCLHM 191
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYKC_YEAST (Lysyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=KRS1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 4.152e-27 Identity = 74/161 (45.96%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 230 PQSQKPAADDEDMDPTQYLENRKRYL-EIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKT---KRGEP*PS-FPKSFVVLSPCSHM 697 P S+K D+DP+QY E R R + E++K NPYPHKF VS+S E++A Y L G+ L + VS+AGRI +KR S SKL FY LHG G +VQ+M+ + D + K H +KRGDIVGV G+ G+T K GE S F +L+PC HM Sbjct: 56 PASKKKTDLFADLDPSQYFETRSRQIQELRKTHEPNPYPHKFHVSISNPEFLAKYAHLKKGETLPEEKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQL-QDYCDPDSYEKDHDLLKRGDIVGVEGYVGRTQPKKGGEGEVSVFVSRVQLLTPCLHM 215
BLAST of DY260488 vs. ExPASy Swiss-Prot
Match: SYK_THELT (Lysyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=lysS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.293e-11 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 284 LENRKRYLEIQKKEGKNPYPHKFFVSMSIIEYIANYGGLGNGDHLEDISVSLAGRIMSKRSSSSKLFF--YDLHGGGAKVQVMADASKSDMDEVEFSKFHASVKRGDIVGVTGFPGKTKRGEP*PSFPKSFVVLS 682 L R + +E +K G NPYP+KF + + + L G+ L+D +S AGR+M+ R FF D +G ++ A ++++ E +++ F + GDI+G+TGFP K++ GE + K+F +LS Sbjct: 6 LSQRAKEVEELRKLGVNPYPYKFEKTHTTKTIQEKFQALQPGEVLQDEEISTAGRVMTVRLHGKSCFFTIKDFYG-----RIQAYIRQNEISEEKYNLFKKYIAPGDIIGITGFPFKSRTGEL-TVYVKNFQLLS 134 The following BLAST results are available for this feature:
BLAST of DY260488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260488 ID=DY260488; Name=DY260488; organism=Citrus clementina; type=EST; length=1272bpback to top |