DY260491

Overview
NameDY260491
Unique NameDY260491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1299
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 2.165e-71
Identity = 136/174 (78.16%), Postives = 151/174 (86.78%), Query Frame = 2
Query:  167 APQGSVPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            +PQ   PRLNERILSS+SRRSVAAHPWHDLEIGP AP++FNVV+EISKGSKVKYELDKKTGLIKVDRILYSSVVYP NYGFIPRTLCEDNDPMDVL+LMQEPVLPGCFLRA+AIGLMPMID GEKDDKIIAVCADDP        ++LPP R ++I  FF +  +K + K+VAV
Sbjct:    9 SPQRRAPRLNERILSSISRRSVAAHPWHDLEIGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKVDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFF-EDYKKNENKDVAV 181          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 5.897e-69
Identity = 137/189 (72.49%), Postives = 151/189 (79.89%), Query Frame = 2
Query:  122 MSEEAAHGDGSEAVEAPQGSVPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            MSEE    D + A        P+LNERILSS+SRRSVAAHPWHDLEIGP AP +FNVVVEI+KGSKVKYELDKKTGLIKVDR+LYSSVVYPHNYGF+PRTLCEDNDPMDVL+LMQEPV+PG FLRA+AIGLMPMID GEKDDKIIAVCADDP         EL P R  +I  FF +  +K + KEVAV
Sbjct:    1 MSEE----DKTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQEPVVPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFF-EDYKKNENKEVAV 184          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.606e-66
Identity = 133/188 (70.74%), Postives = 149/188 (79.26%), Query Frame = 2
Query:  134 AAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            A   DG    +AP GS      LNERILSSMS++ VAAHPWHDLEIGPGAP +FN VVEI +GSKVKYELDK TGLIKVDR+LYSSVVYPHNYGFIPRTLCED DPMDVL+LMQE V+PGCFLRA+AIGLMPMID GEKDDKIIAVCADDP     +  +E+PP R  +I  FF +  +K + KEVAV
Sbjct:    2 AGEADG----KAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFF-EDYKKNENKEVAV 184          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.606e-66
Identity = 133/188 (70.74%), Postives = 149/188 (79.26%), Query Frame = 2
Query:  134 AAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            A   DG    +AP GS      LNERILSSMS++ VAAHPWHDLEIGPGAP +FN VVEI +GSKVKYELDK TGLIKVDR+LYSSVVYPHNYGFIPRTLCED DPMDVL+LMQE V+PGCFLRA+AIGLMPMID GEKDDKIIAVCADDP     +  +E+PP R  +I  FF +  +K + KEVAV
Sbjct:    2 AGEADG----KAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFF-EDYKKNENKEVAV 184          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.041e-65
Identity = 124/155 (80.00%), Postives = 135/155 (87.10%), Query Frame = 2
Query:  122 MSEEAAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDP 577
            MS+E    D + A  A Q +    P+LNERILSS+SRR   AHPWHDLEIGPGAP +FNVVVEI+KGSKVKYELDKKTGLIKVDR+LYSSVVYPHNYGFIPRTLCEDNDPMDVL+LMQEPV+PG FLRA+AIGLMPMID GEKDDKIIAVCADDP
Sbjct:    1 MSQE----DSTSAAAAQQPTSRPAPKLNERILSSLSRRGGGAHPWHDLEIGPGAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDP 151          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 2.031e-61
Identity = 114/152 (75.00%), Postives = 129/152 (84.87%), Query Frame = 2
Query:  191 LNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF 646
            LNER  ++ + RS AAHPWHDLEIGP APT+FN VVEISKG KVKYELDK +GLIKVDR+LYSS+VYPHNYGFIPRT+CED+DPMDVL+LMQEPVL G FLRA+AIGLMPMID GEKDDKIIAVCADDP     +  +ELPP R ++I  FF
Sbjct:   24 LNERNFAAFTHRSAAAHPWHDLEIGPEAPTVFNCVVEISKGGKVKYELDKNSGLIKVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFF 175          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.510e-48
Identity = 97/155 (62.58%), Postives = 116/155 (74.84%), Query Frame = 2
Query:  224 RSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            R  A+HPWHDL  G  AP   + V+EI +GSKVKYELDK TGL  VDRILYSSVVYPHNYGF+P+TLCED DP+DVL+LMQEPV+P CFLRAK IG+M M+D GE+DDK+IAV ADDP         +LPP R ++I  FF +  +K + KEV V
Sbjct:    5 RGTASHPWHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTLCEDGDPLDVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFF-EDYKKNEHKEVVV 158          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.571e-35
Identity = 70/136 (51.47%), Postives = 95/136 (69.85%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF 646
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D DP+D+L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D  V  +    ELPP    ++  FF
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFF 138          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.571e-35
Identity = 70/136 (51.47%), Postives = 95/136 (69.85%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF 646
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D DP+D+L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D  V  +    ELPP    ++  FF
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAANDMSVNHINDISELPPHFTLELKHFF 138          
BLAST of DY260491 vs. ExPASy Swiss-Prot
Match: IPYR_PYRFU (Inorganic pyrophosphatase OS=Pyrococcus furiosus GN=ppa PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.981e-32
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADDPRV*ALQ*HQELPPPRPSKILPFF*KLLEK*QTKEVAV 688
            +P+HDLE GP  P +   ++EI KGS+ KYELDKKTGL+K+DR+LYS   YP +YG IPRT  ED+DP D++++M+EPV P   + A+ IGL  MID G+KD K++AV  +DP     +   ++P     +I  FF K  ++ Q KE+ V
Sbjct:    2 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFF-KRYKELQGKEIIV 150          
The following BLAST results are available for this feature:
BLAST of DY260491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
IPYR_SOLTU2.165e-7178.16Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR_MAIZE5.897e-6972.49Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR_ORYSJ1.606e-6670.74Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI1.606e-6670.74Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_HORVD1.041e-6580.00Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR2_ARATH2.031e-6175.00Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR2_CHLRE1.510e-4862.58Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
IPYR_LEPIN5.571e-3551.47Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC5.571e-3551.47Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_PYRFU1.981e-3247.33Inorganic pyrophosphatase OS=Pyrococcus furiosus G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YK15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260491 ID=DY260491; Name=DY260491; organism=Citrus clementina; type=EST; length=1299bp
TTAATCATGCCAAAACATTAATATATTATAGATGGCAATAGATCCATTGC
TGTATCACTCTATGAATCTCCTCTCAAGATTACACCTACAGTAAGTGATT
ATATGTTATGTTGGGGCAGAGATGAGTGAGGAGGCGGCGCATGGAGATGG
AAGTGAAGCTGTTGAAGCTCCACAGGGTTCAGTTCCTCGGCTGAACGAGA
GGATCCTCTCATCTATGTCGAGGAGATCAGTTGCTGCACATCCTTGGCAT
GATCTTGAAATTGGACCTGGAGCTCCCACCATCTTCAATGTTGTTGTTGA
GATATCAAAGGGAAGTAAGGTCAAATATGAACTTGACAAGAAAACAGGAT
TGATTAAGGTTGATCGAATTCTTTATTCCTCTGTGGTCTATCCTCATAAC
TATGGTTTCATCCCTCGCACATTATGTGAAGATAATGATCCAATGGATGT
TTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCCTGCGGGCCA
AGGCTATTGGATTAATGCCCATGATTGATCACGGAGAAAAAGATGATAAG
ATCATTGCAGTTTGTGCCGATGATCCCAGAGTATAAGCCCTACAATGACA
TCAAGAGCTTCCCCCTCCTCGTCCTTCCAAGATCCTTCCTTTCTTTTGAA
AACTACTAGAAAAATGACAAACAAAGGAGGTAGCCGTTTAATGAATCTTT
CCCTTCTTCCGCTGCTGTTGAACCCTCCCCCACCTCAAAGGAACCCTTTA
TCCCGAGAAATTTCTCGCCCCACCCCAACCCGTCAGGCACTTTCCCCTTT
CCCTTCCCTCCCCCCACCTCTTTTCATCACCACTGGACCTTCCACCCTCC
TTACACCTCTCCTTTTCCCCCTCCCTCCTCGAACACGATAACACCACCGC
CCACCACCCCCTACTCGGCACCCACCCCCACCAACCCCCCTGCCCCCCCC
TCCTCACCCACCAATCACCCCCCGCACCTCACCCACAGCCTCCTACCTCT
CACCCCCCCACCACACAAAAACTACAACAATCAAAAACCAGCAACCCTCT
ACCGCCCTCCAATACCTGCCCCCTTCTTCCCTCGCCTCCTCCTCTGGAAT
CCTTGCATCCCGTTTCGTACTTGCCTGCCCCGCATTCTTTCACTCTCCGC
AATAAATTCTGACATATCGCCTCGAGCCCATCCCTACTGCTTTCCACCTC
CTCCTCTCCCTCTCATACTTCAGATCCTCTCCCCGCTCACCTCCTCCCGC
ACCCCTCTACCATACGCACCTTCATATGCTTTCTCTCTCAGCTTCAGTT
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