DY260497

Overview
NameDY260497
Unique NameDY260497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1235
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.084e-56
Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 3
Query:   54 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLS 443
            MAEKSFKYVI+GGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG ARLPGFHVCVGSGGER LPEWY EKGI LILSTEIV+AD+ASKTL+SA G  F+Y   VIATG+TVL+LS
Sbjct:    1 MAEKSFKYVIVGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGAARLPGFHVCVGSGGERQLPEWYAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGTTVLKLS 130          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 3.265e-53
Identity = 103/130 (79.23%), Postives = 120/130 (92.31%), Query Frame = 3
Query:   54 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLS 443
            MAEKSFKY+ILGGGVSAGYAA+EFA QGV+PGELA+ISKEAVAPYERPALSK YLFPEG ARLPGFH CVGSGGE+LLPE YK+KGI LILSTEIV+AD+++K+L+SATG +F+Y   +IATGSTVL+L+
Sbjct:    1 MAEKSFKYIILGGGVSAGYAAKEFANQGVQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPESYKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLT 130          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.764e-52
Identity = 103/130 (79.23%), Postives = 115/130 (88.46%), Query Frame = 3
Query:   54 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLS 443
            MA+++FKYVILGGGV+AGYAAREF KQG+ PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFHVCVGSGGERLLP+WYKEKGI LILSTEIV AD+ +K L SA G I+ Y   +IATGSTV++LS
Sbjct:    1 MADETFKYVILGGGVAAGYAAREFVKQGLNPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPDWYKEKGIELILSTEIVEADLPAKRLRSAHGKIYNYQTLIIATGSTVIKLS 130          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.190e-49
Identity = 100/126 (79.37%), Postives = 107/126 (84.92%), Query Frame = 3
Query:   66 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLS 443
            SFKY+I+GGGVSAGYAAREF KQGV PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFH CVGSGGERLLPEWY EKGI L LSTEIV AD+A+K L SA G  F Y   VIATGS V++L+
Sbjct:    4 SFKYIIIGGGVSAGYAAREFVKQGVHPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHTCVGSGGERLLPEWYSEKGIQLYLSTEIVSADLAAKFLKSANGEHFDYQTLVIATGSAVIRLT 129          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.345e-43
Identity = 88/128 (68.75%), Postives = 104/128 (81.25%), Query Frame = 3
Query:   60 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLS 443
            EKSFKYVI+GGGV+AGYAAREF  QGVKPGELAIIS+E V PYERPALSK Y+  E  A LP F+V  G GGER  P+WYKEKGI LIL TEIV+AD+A+KTL+S TG +F+Y   + ATGS+V++LS
Sbjct:    4 EKSFKYVIVGGGVAAGYAAREFFNQGVKPGELAIISREQVPPYERPALSKGYIHLENKATLPNFYVAAGIGGERQFPQWYKEKGIELILGTEIVKADLAAKTLVSGTGQVFKYQTLLAATGSSVIRLS 131          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.280e-37
Identity = 78/130 (60.00%), Postives = 99/130 (76.15%), Query Frame = 3
Query:   60 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQLSAL 449
            EKS+KYVI+GGGV+ GYAAREF+ QG+KPGELAIISKE V P+ERP L+K Y+  E    L   +VC G+G  +  P WYKEKGI LI+ TEIV+AD+ASKTL+S  G I++Y   +IATGST ++LS +
Sbjct:    4 EKSYKYVIIGGGVAGGYAAREFSNQGLKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYPNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEI 133          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.126e-36
Identity = 74/126 (58.73%), Postives = 92/126 (73.02%), Query Frame = 3
Query:   63 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGSTVLQL 440
            ++F YVILGGGV+AGYAA EF ++GV  GEL IIS+E VAPYERPALSK +L PE  ARLP FH CVG+  E+L P+WYK+ GI L+L T +   D+  KTLLS+TG    Y   +IATG+  L+L
Sbjct:    3 RAFVYVILGGGVAAGYAALEFTRRGVSDGELCIISEEPVAPYERPALSKGFLLPEAPARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLIIATGARALKL 128          
BLAST of DY260497 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 2.689e-31
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   51 SMAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFP--EGTARLPGFHVCVGSGGERLLPEWYKEKGI*LILSTEIVRADIASKTLLSATGLIFQY*IQVIATGST 428
            S A ++ ++VI+GGG +AGYAAR F + G+  G L I++KEA APYERPAL+KAYLFP  +  ARLPGFH CVG GGER  P+WYKEKGI +I    +  AD   +TL +  G   +Y   +IATG T
Sbjct:   55 SFANENREFVIVGGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPDWYKEKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCT 182          
The following BLAST results are available for this feature:
BLAST of DY260497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MDAR_SOLLC1.084e-5686.92Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR3_ARATH3.265e-5379.23Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARS_CUCSA2.764e-5279.23Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR_PEA2.190e-4979.37Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDAR4_ARATH2.345e-4368.75Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH3.280e-3760.00Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR2_ARATH2.126e-3658.73Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARP_ARATH2.689e-3153.91Monodehydroascorbate reductase, chloroplastic OS=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YK24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260497 ID=DY260497; Name=DY260497; organism=Citrus clementina; type=EST; length=1235bp
CACTATAAATAGACTTAGAAATCGTTGAGCATTTAACTTTTTTCGATCGA
TCAATGGCGGAGAAGAGCTTCAAGTACGTGATCCTCGGTGGCGGTGTCTC
TGCTGGATATGCAGCTAGGGAGTTTGCTAAGCAGGGTGTTAAGCCAGGCG
AGCTGGCAATTATCTCCAAAGAAGCGGTTGCTCCGTATGAGCGTCCAGCA
CTTAGCAAGGCATATCTTTTCCCTGAGGGAACTGCTAGACTTCCCGGTTT
CCATGTCTGTGTTGGAAGTGGTGGAGAGAGACTGCTTCCTGAGTGGTACA
AAGAGAAAGGAATCTAATTGATCCTCAGCACGGAAATAGTCAGAGCAGAT
ATTGCTTCCAAGACTCTCCTTAGTGCAACTGGGCTTATCTTTCAGTACTA
GATTCAAGTAATTGCCACTGGCTCCACTGTCTTACAGTTGAGTGCACTTT
AGTCCTGCAGGCCCCCCCTCCCCCAGATACTGTCCAACTAAAGACAGCGG
AGACGCCGATAATCCAGTTGAAGATACCGTAATAGTCCGATCACCCTCAT
CGTCCTGCCACGTCCATGTTACTAACCAGCTCGCCCCTCCTTGACTCACC
CCTTGACCACCTCTCCACCACCCGCCCTCCCCCCTCTTCCTTTCACTCCC
ATCCATCGCCCATCCCTCCCACCTTCCTCTCTCTCCATCTCTTCCGATCC
CCATATCGCGCTCTTCGCGACACTCTCCATACTTAGAGCCGCCGCTTGTC
ACTGCTCTACTCCATGCTCCCCCTCACTGCCCCGCTCTAGTTCCCTTGTC
CCTTCCTATCGACAATTCTTCTCCTAACTACTCCCTCCGATACTAACTTA
GTGCTCTTACCCCCTCTCCCTCTTCCCTTCTCTCCCCCCCCACCCCACTC
ACTTTCCACCAACCTACCTCCTCCTACTCCCCACACTCTACCCTACCCAC
CTATTCCTACACCACCCACTCCTATGCTCCTACCCTTAACAACTACCCCT
CGATACACTATCGCTCTACCTACTCCACCGCCACTTCTCACACTCCCCAC
CTCCCCATTTCCCTCTGCCCATCCCCTAACCACCTCCTATTCCCCCTACC
TCTTCCACTACTTCTCTTTTTGACTCTTCTTTCATCTTCCCATATAACTT
CCTCACACTTCATTCTCTCCCCTCTGTTCCATCCCTTACCTACCAACACT
CCTTTTCTTAGTTCCTACTCCTCTCCATCTCTTCA
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