DY260502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.274e-43 Identity = 107/216 (49.54%), Postives = 121/216 (56.02%), Query Frame = 3 Query: 228 MPIRQMKDSSEQHLVIKTHLQNTMNQSQKQPKTAQNGKGPPHQ-------------ELQNSKPHNQTSPPTKNXXXXXXXXXXKSDQNDVFMRPSSRPCTVAHKPVNQVCDLXXXXXXXXXXXXRSLCATEMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 MPIRQMKDSSE HLVIKT N PKT QNGK PP + Q S P SPP+KN KSDQ DV MRPSSRP + + +MG K+ +FAPRPG+G +GTKCIVKANHF A+LP KDLNQYDVTITPEV S++VNRAI+AE VR +ESDL RLPA GRK Sbjct: 1 MPIRQMKDSSETHLVIKTQPLKHHN-----PKTVQNGKIPPPSPSPVTVTTPATVTQSQASSP----SPPSKNRSRRRNRGGRKSDQGDVCMRPSSRPRKPPPPSQTTSSAVSVATAGEIVAVNHQM---QMGV---RKNSNFAPRPGFGTLGTKCIVKANHFLADLPTKDLNQYDVTITPEVSSKSVNRAIIAELVRLYKESDLGRRLPAYDGRK 201 HSP 2 Score: 33.113 bits (74), Expect = 1.274e-43 Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 2 Query: 854 GELPFVWKESKINLVKETGGDQGSPKVEK 940 GELPF WKE + +V E G PK E+ Sbjct: 207 GELPFTWKEFSVKIVDEDDGIINGPKRER 235 HSP 3 Score: 21.9422 bits (45), Expect = 1.274e-43 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 198 DGRKSLYTAGELPF 211
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.975e-25 Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 3 Query: 582 MGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 +G P +SK LSF RPG+G VG +C+VKANHF AELPDKDL QYDV ITPEV SR+VNRAIM+E VR +SDL RLPA GRK Sbjct: 113 IGPPVASKGLSFCRRPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRSVNRAIMSELVRLYHDSDLGGRLPAYDGRK 197
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.104e-23 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P+SSK+ F RPG GQ G +CIVKANHFFAELPDKDL+ YDVTITPEV SR VNRA+M + V ++S L RLPA GRK Sbjct: 171 PSSSKAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRK 252 HSP 2 Score: 23.8682 bits (50), Expect = 2.104e-23 Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 2 Query: 854 GELPFVWKESKINLVKETGGDQGSPKVEKKK 946 G LPF KE +INL+ E G G + + K Sbjct: 258 GPLPFNSKEFRINLLDEEVGAGGQRREREFK 288 HSP 3 Score: 21.9422 bits (45), Expect = 2.104e-23 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 249 DGRKSLYTAGPLPF 262
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.924e-21 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P SSKS+ F RPG G G +CIVKANHFFAELPDKDL+QYDV+ITPEV SR VNRA++ E V ++S L RLP GRK Sbjct: 199 PPSSKSVRFPMRPGKGTFGDRCIVKANHFFAELPDKDLHQYDVSITPEVPSRGVNRAVIGEIVTQYRQSHLGGRLPVYDGRK 280 HSP 2 Score: 21.9422 bits (45), Expect = 1.924e-21 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 277 DGRKSLYTAGPLPF 290
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.956e-21 Identity = 59/102 (57.84%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRKEPVHSWGNFLLFGRSPKLTL 896 P SSKS+ F RPG G G +CIVKANHFFAELPDKDL+QYDV+ITPEV SR VNRA+M E V + S L RLPA GRK +++ G R+ ++TL Sbjct: 236 PPSSKSVRFPLRPGKGTYGDRCIVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMFELVTLYRYSHLGGRLPAYDGRKS-LYTAGPLPFASRTFEITL 336
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.236e-21 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P S+KS F RPG G +GT+C+VKANHFFA+LPDKDL+QYDV+ITPE+ SR +RA+M E VR + S L RLPA GRK Sbjct: 163 PVSTKSFKFPHRPGSGSIGTRCLVKANHFFAQLPDKDLHQYDVSITPELTSRIRSRAVMEELVRLHKMSYLGGRLPAYDGRK 244 HSP 2 Score: 21.9422 bits (45), Expect = 4.236e-21 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 241 DGRKSLYTAGPLPF 254
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.171e-21 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P+SSKS+ F RPG G +GT+C+VKANHFFA LP+KDL+ YDV+ITPEV SR VNRA++ E V + S L RLPA GRK Sbjct: 135 PSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSITPEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRK 216 HSP 2 Score: 22.3274 bits (46), Expect = 7.171e-21 Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSFCLEGVQ 885 +G KSLYTAG F + Q Sbjct: 213 DGRKSLYTAGPLPFTSQEFQ 232
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.907e-14 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P SSK+++F RPG G +G K +V+ANHF ++ D+DL YDV+I PEV S+TVNR +M V+ ++S L + PA GRK Sbjct: 139 PASSKAVTFPVRPGRGTLGKKVMVRANHFLVQVADRDLYHYDVSINPEVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRK 220 HSP 2 Score: 21.9422 bits (45), Expect = 2.907e-14 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 217 DGRKSLYTAGPLPF 230
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.705e-13 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 PTSSK++ RPG+G VGT C V+ANHF +L DK++ YDV I PE+ SR NR I+ E +R+ ++ R PA GRK Sbjct: 118 PTSSKAVVLQARPGFGTVGTSCRVRANHFVVQLADKEIYHYDVAIAPELRSRERNRNIINELLRSHKKYLDGRRSPAYDGRK 199
BLAST of DY260502 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.205e-12 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 591 PTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVGSRTVNRAIMAEPVRA*QESDLRMRLPA*GGRK 836 P S K L+ RPG+G G K +++ANHF + D +L YDV+I PE SR NR ++ E ++ ++ L +LPA GRK Sbjct: 191 PVSKKGLAHPARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRK 272 HSP 2 Score: 22.7126 bits (47), Expect = 3.205e-12 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 826 EGEKSLYTAGGTSF 867 +G KSLYTAG F Sbjct: 269 DGRKSLYTAGSLPF 282 The following BLAST results are available for this feature:
BLAST of DY260502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260502 ID=DY260502; Name=DY260502; organism=Citrus clementina; type=EST; length=1254bpback to top |