DY260710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.209e-42 Identity = 65/93 (69.89%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 237 PTKTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISE 515 PT +HLGF NQ++ F NK R C VITC AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLIS+ Sbjct: 9 PTTSHLGF--NQKKQLFFCNKSAYKRVSF---SSRPC-VITCLAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISD 95 HSP 2 Score: 76.6406 bits (187), Expect = 1.209e-42 Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 517 TTTVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKEKKDRMSIKNPIY 678 TTTVICLDDYHSLD TGRK+K VTALDP++ F+L YE VK K+ +++ PIY Sbjct: 96 TTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGKAVEKPIY 149
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.960e-37 Identity = 58/103 (56.31%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 207 SLNSPCSLYSPTKTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISE 515 SL SPC+ T + GF NQ +F+ R + G S Q IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLIS+ Sbjct: 11 SLRSPCT----TIPNSGFRQNQ---VIFFTTRSSRRSNT----RHGARTFQVSCAVEQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISD 102 HSP 2 Score: 77.7962 bits (190), Expect = 3.960e-37 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 517 TTTVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKEKKDRMSIKNPIY 678 TTTVICLDDYHSLD TGRK+K VTALDPK+ F+L YE VK K+ +I+ PIY Sbjct: 103 TTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIY 156
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.826e-34 Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 3 Query: 351 VITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISE 515 +ITC+ +TIVIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLIS+ Sbjct: 43 LITCA---QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISD 94 HSP 2 Score: 72.7886 bits (177), Expect = 3.826e-34 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 517 TTTVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKEKKDRMSIKNPIY 678 TTTVICLDDYHSLD GRK++ VTALDP++ F+L YE VK K+ ++++ PIY Sbjct: 95 TTTVICLDDYHSLDRYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIY 148
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26 Identity = 71/132 (53.79%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 222 CSLYS-PTKTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISENHHCDLLR*LSLA*HNWKKR*ECHCT*PKINNF 614 C++Y+ PT THLG NQ VF+N + R VITCS QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLIS+ L N +K + PK N+F Sbjct: 4 CTVYTIPTTTHLGSSFNQNNKQVFFNYKRSSSSNNTLFTTRPSYVITCS--QQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDF 133 HSP 2 Score: 70.0922 bits (170), Expect = 1.984e-11 Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 1 Query: 517 TTTVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKEKKDRMSIKNPIY 678 TTTVICLDD+HSLD GRK + VTALDPK+ F+L YE VK K+ ++ PIY Sbjct: 101 TTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIY 154
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.857e-18 Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 523 TVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKEKKDRMSIKNPIYKQK 687 TVICLDDYHSLD GRK VTALDP++ F+L YE +K K SI PIY + Sbjct: 38 TVICLDDYHSLDRQGRKAAGVTALDPRANNFDLMYEQIKTLKSGQSIMKPIYNHE 92 HSP 2 Score: 45.0542 bits (105), Expect = 6.857e-18 Identity = 18/27 (66.67%), Postives = 24/27 (88.89%), Query Frame = 3 Query: 378 QTIVIGLAADSGCGKSTFMRRLTSVFG 458 + ++IG+A DSGCGKSTF+RRLT +FG Sbjct: 7 RVVLIGVAGDSGCGKSTFLRRLTDLFG 33
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 366 AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLIS--------ENHHC 527 A +T+VIGLAADSGCGKSTFMRR+TS+FGG +PP GGNPDSNTLIS +++HC Sbjct: 31 ADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHC 92
BLAST of DY260710 vs. ExPASy Swiss-Prot
Match: KPPR_VITSX (Phosphoribulokinase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.080e-15 Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 3 Query: 441 LTSVFGGAAEPPKGGNPDSNTLISE 515 LTSVFGGAAEPP+GGNPDSNTLIS+ Sbjct: 1 LTSVFGGAAEPPRGGNPDSNTLISD 25 HSP 2 Score: 52.373 bits (124), Expect = 1.080e-15 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 517 TTTVICLDDYHSLDITGRKDKSVTALDPKSTIFNLTYEHVKE 642 TTTVICLDDYHSL D+ VTALDP++ F+L YE VK+ Sbjct: 26 TTTVICLDDYHSL------DRGVTALDPRANDFDLMYEQVKK 61 The following BLAST results are available for this feature:
BLAST of DY260710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260710 ID=DY260710; Name=DY260710; organism=Citrus clementina; type=EST; length=905bpback to top |