DY260726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_MAIZE (40S ribosomal protein S28 OS=Zea mays GN=RPS28 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.951e-18 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 8 LDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 +D+Q+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPV EGDI Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDI 51
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS282_ARATH (40S ribosomal protein S28-2 OS=Arabidopsis thaliana GN=RPS28C PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.401e-17 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 8 LDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 +DSQIKHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+ Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDV 50
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS281_ARATH (40S ribosomal protein S28-1 OS=Arabidopsis thaliana GN=RPS28A PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.802e-17 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 8 LDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 +DSQIKHAVVVKVMGRTGSRGQVTQVRVKF D +R+IMRNVKGPVREGDI Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRYIMRNVKGPVREGDI 50
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_ICTPU (40S ribosomal protein S28 OS=Ictalurus punctatus GN=rps28 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_DANRE (40S ribosomal protein S28 OS=Danio rerio GN=rps28 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_RAT (40S ribosomal protein S28 OS=Rattus norvegicus GN=Rps28 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_PIG (40S ribosomal protein S28 OS=Sus scrofa GN=RPS28 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_MOUSE (40S ribosomal protein S28 OS=Mus musculus GN=Rps28 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_HUMAN (40S ribosomal protein S28 OS=Homo sapiens GN=RPS28 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 20 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY260726 vs. ExPASy Swiss-Prot
Match: RS28_DROME (40S ribosomal protein S28 OS=Drosophila melanogaster GN=RpS28b PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.586e-12 Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 8 LDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 160 +D + A V+KV+GRTGS+GQ TQV+V+FL +QNR I+RNVKGPVREGDI Sbjct: 1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDI 51 The following BLAST results are available for this feature:
BLAST of DY260726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260726 ID=DY260726; Name=DY260726; organism=Citrus clementina; type=EST; length=954bpback to top |