DY261107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 355.14 bits (910), Expect = 3.988e-97 Identity = 182/247 (73.68%), Postives = 198/247 (80.16%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MATSAIQQSAFAGQTAL+QSNE V K+G GGR++MRRTVKS P SIWYGP RPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLFDH 245
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.675e-95 Identity = 181/247 (73.28%), Postives = 195/247 (78.95%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MATSAIQQSAFAGQTAL+ NE VRK+G GGR TMRRTVKS PQSIWYG RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH WAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLYDH 245
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 6.366e-95 Identity = 178/247 (72.06%), Postives = 196/247 (79.35%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MATSAI+QSAFAGQTAL+ NE VRK+G +GGR TMRRTVKS PQSIWYG RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH WAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +E YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLFDH 245
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 1.418e-94 Identity = 178/247 (72.06%), Postives = 193/247 (78.14%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MAT AIQQSAF GQ + NEF+RKVG GRITMRRTVKS PQSIWYG RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH WAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLSDH 245
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 3.493e-93 Identity = 176/247 (71.26%), Postives = 197/247 (79.76%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG RPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGC+FPE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +E YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLADH 244
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 1.016e-92 Identity = 175/247 (70.85%), Postives = 192/247 (77.73%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MATSAIQQSAF G+T LRQ NEF+RK G R TMRRTVKS P+SIWYGP RPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHS WAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSILAIWA QVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKN-GRLAMFSMFGFFV-QAIVTGKGPIQNLYDH 245
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 335.109 bits (858), Expect = 4.270e-91 Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRF 663 MATS IQQSAFAGQT L+ NE VRKVG +GGR++MRRT+KS P+SIWYGP RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQSILAIWACQVVLMG VE YR+ AFDPLGLA++P F Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 8.904e-89 Identity = 175/247 (70.85%), Postives = 193/247 (78.14%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKS PQSIWYGP RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHS WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN-GRLAMFSMFGFFV-QAIVTGKGPIENLFDH 243
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 8.904e-89 Identity = 175/247 (70.85%), Postives = 193/247 (78.14%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKS PQSIWYGP RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHS WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVE YR+ AFDPLGLAD+P F+ ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN-GRLAMFSMFGFFV-QAIVTGKGPIENLFDH 243
BLAST of DY261107 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 1.286e-87 Identity = 172/249 (69.08%), Postives = 191/249 (76.71%), Query Frame = 1 Query: 46 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPHRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVERYRIXXXXXXXXXXXXXXXXAFDPLGLADEPHRFS*VERQGTQQMAVLAKFSKVGIHLFRQIVTGKG--SNLKNH 780 MAT SAIQ S+ AGQT LR Q NE V+KVG A RITMRRTV+S P+SIWYGP RPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH WAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSILAIWACQVVLMG +E YR+ AFDPLGLAD+P + ++ + + LA FS G + + IVTGKG NL +H Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKN-GRLAMFSMFGFFV-QAIVTGKGPIENLYDH 246 The following BLAST results are available for this feature:
BLAST of DY261107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY261107 ID=DY261107; Name=DY261107; organism=Citrus clementina; type=EST; length=1079bpback to top |