DY261197

Overview
NameDY261197
Unique NameDY261197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY261197 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.037e-26
Identity = 68/186 (36.56%), Postives = 104/186 (55.91%), Query Frame = 1
Query:   43 ATTLSFLILALGSNSLLVLGTSSVPEPLLDVNGNKVESTLQYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIKLTLSPYNNST-IVRESTDLNLRFSVLLSGRD-CCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKFVHCPSVCEFLCPNSATTL 594
            AT +  L+ A  S S      ++   P+LD +G+++++ +QYY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YKF  CPSVC+     S TTL
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCD-----SCTTL 179          
BLAST of DY261197 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 9.196e-22
Identity = 61/179 (34.08%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   34 ISLATTLSFLILALGSNSLLVLGTSSVPEPLLDVNGNKVESTLQYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIKLTLSPYN-NSTIVRESTDLNLRFSVLLSGRDCCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKFVHCPSVC 561
            +SL+      +LA  +N LL     S P P+LD++G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK V CP+VC
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVC 181          
BLAST of DY261197 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.052e-17
Identity = 56/150 (37.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query:  115 PEPLLDVNGNKVESTLQYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIKLTLSPYNN--STIVRESTDLNLRFSVLLSGRDCCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKFVHCPS 555
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YKF  CPS
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPS 144          
The following BLAST results are available for this feature:
BLAST of DY261197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC8.037e-2636.5621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU9.196e-2234.08Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.052e-1737.33Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP2YB05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY261197 ID=DY261197; Name=DY261197; organism=Citrus clementina; type=EST; length=1294bp
CAGATATATAGCTTTGAAAACAAAAAAATGAAGATTTCATTAGCAACAAC
ACTCTCTTTCCTTATCCTTGCCTTGGGCTCAAACTCTTTGTTGGTCTTGG
GCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCAACGGCAACAAGGTC
GAATCCACCCTTCAGTACTACATAGTCTCAGCCATCTGGGGAGCTGGCGG
TGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGGACG
TTATCCAATTACCTTCTGATATGCAAAATGGAATCAAATTAACACTGTCA
CCGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTTGAG
ATTCTCAGTGTTGCTATCTGGACGTGACTGTTGTAACGAACAACCATTGT
GGAAAGTTGATAATTATGACGCTGCATCAGGCAAATGGTTTATAACAACC
GGGGGACTTGATGGCCACCCTGGAGCTGAAACTTTGCTAAATTGGTTTAA
GCTTGAAAAAATTGGAAATTTTCCAGGTACATACAAATTCGTTCATTGCC
CATCCGTTTGCGAGTTCTTGTGTCCAAACTCCGCAACAACGTTGGCCCGT
TCTTTTGAGGAGGGCTTCCCACCTCTGGTTCTGGTTCAGAAAAAACACCC
CGCATTTCCTGGTGTGTTTATTCCCCGCAACAAAAAAACCACCGTTCGGT
GTAATCCTTGTCCCCTCCCCGGCTATGGGTTTTTTTGTCCAAAAAACGGA
CCGGGGTAGCGTCCTCGTTTATTCTCAGGGAAAAAAATCAAAAAAAAGAT
ACCCGGTGGTCCTTTGGGGGGATAAAAAACTCCCGGGTGGGGTGAATCCC
TAAAAGTGACTTCTCCTGCCGAGCGGGACATCCAAATCCCGTGCTTCTTT
TTCTTTTAAAAAAAAAAAAAAAAAGAACCACCCCACACTTCCCGCGAACA
GTGCCCCTACAGAAAAATCATGGGCTTTGTTATTTTGGGCCCCCACCACG
GTTCATATCCAGGCACATAAATAATCTTTATTTCCTCCCCGCCCGACTAC
CCTCCTCGACCTCGCTTTGAATACCTCCCCTCATACTCTTCTTATGCGGC
CCTCTCAATTCCCACTTGTTACCCACAATCCCGAAATACCACATCCACCC
GCCATAATAAAAACAACACAAATTCCTCCTCCCTCATAACGCACAGCTTA
CGTCTCTCCATTACAGCACTCCCGGTGTACGAATCTCTCTCCCTCCTATC
ATGTACATCTCCCGATCGTCCTGACTCTGATCTCTAGCTACATT
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