DY261242

Overview
NameDY261242
Unique NameDY261242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1326
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 5.344e-57
Identity = 97/155 (62.58%), Postives = 123/155 (79.35%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKPETK-DGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GI+  RL+EERK WR++HP+GF A+P T  DGSLNL +W C IPGKT T+WEGG +PL + F+EDYPSKPPKC+FP+ FFHPNVYPSGTVCLSILNE+  W+P++T+K +L+GIQDLLD PNP  PAQ     LF+ +  +Y K+V+ Q+K YPP
Sbjct:    3 GISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFSP 157          
BLAST of DY261242 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.031e-56
Identity = 100/155 (64.52%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   19 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSLNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAQYKKRVRQQAKQYPP 480
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  +Y+KRVR QAK++ P
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFSP 157          
The following BLAST results are available for this feature:
BLAST of DY261242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
UBC9_DICDI5.344e-5762.58Sumo-conjugating enzyme ubc9 OS=Dictyostelium disc... [more]
UBC9_XENTR2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK2.031e-5664.52SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE2.031e-5664.52SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE2.031e-5664.52SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP2YD13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY261242 ID=DY261242; Name=DY261242; organism=Citrus clementina; type=EST; length=1326bp
GTCATCATGTCTTGTGGTGGTATTGCTCGCGGCCGTCTTACAGAGGAGCG
AAAAGCCTGGCGCAAGAATCATCCCCACGGTTTTGTGGCCAAGCCTGAAA
CCAAAGATGGTTCCTTGAATTTGATGATCTGGGAGTGTATCATTCCTGGC
AAGACTGGGACTGATTGGGAAGGTGGCTACTTTCCTCTTACTCTCTACTT
CAGCGAAGACTATCCCAGCAAACCCCCAAAGTGTAAGTTTCCTCAAGGTT
TCTTTCATCCTAATGTCTACCCTTCTGGAACAGTATGCCTGTCAATCCTC
AATGAGGACAATGGGTGGAGACCTGCCATTACTGTGAAGCAAATTTTAGT
GGGCATTCAGGATTTGCTGGATCAACCCAATCCTGCTGATCCTGCACAAA
CTGATGGATACCAGCTTTTCATCCAGGATCCTGCCCAGTACAAAAAAAGG
GTGCGACAGCAGGCCAAGCAATATCCCCCCTGTCCTAAAATGCAAGCTTG
CTTAAATGGGAAAAGAGTAAACTCTTTTGTTACCCCCACAAATAAAATCG
AAGTGGGTTTGGAATTACCAGGGAGAAGTGTGGAAAAAATACGGGGAACA
AACAGAAAAACCTGTATAATAAAAAAATGGGCCCCCAAATTAAATTGGAA
AGGTTTTGGGAAACCCGAAAAATGAGGGGTGGTGCCCCCCCCCGCTCCTC
CTGAGACCCCTCGGGGAAGAAGGATCCAGGGGGAAACACCTAAGGGGAAA
ACACACTGAAAAAAACGAAGGGTAAAAATAATGCCTCCTACCTTCTCCCT
TCGAACAAAACACACACTGAAATCAAAACCCCCAGAACTATGGAAAACAT
GAAAGAGTACAACCTTGTGGATAAGGCACCTAATCTTTTTATTTCTCAAA
CACGGGGAGGTATTTTCCTTTACAAATATAAAAAAATCAACAAAAAAACA
ACCCCCCTCTCTCACCATACCACTCATTTCCATCACACTAAGAAACACCC
ACCTCTACTATCTCACTTCACCGCAAAGCCACAGCCGTCCAATCACTTAA
TTAAAAAAAATAACTCCTCTTACTTCGCTCCACCTACACACAATCTCTGT
CCCCATTAATGATAACCTCCATCCAATCATGACCTATAAGATAGATCTCC
TCGCAGGCTTCATACATCTCTCTAGCGTCCGTCATATTACTAAACTATCC
CCCTCCTCTATACCTTAATTTTGTTCACATCAGTACTCACCACATATCAT
TATCCTCTCTTAATAATACACATCACATATAACAATGTCACATTCCATTA
TTTGAATCGTTTCTATTCACTTTATA
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