DY261477

Overview
NameDY261477
Unique NameDY261477
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1284
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.046e-65
Identity = 123/207 (59.42%), Postives = 144/207 (69.57%), Query Frame = 2
Query:  140 SKSNASLVKLGGILPRT--KRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            S S+ SL       PR+   R L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+L SVA +N D Q+ +FVE+E+LGEQVEAI +
Sbjct:    9 SASSLSLFSPNAEPPRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKR 215          

HSP 2 Score: 50.447 bits (119), Expect = 1.046e-65
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  732 RLKQLTKIAKYVSQLRMVGKGHGVWHSNQKLPHE-GDAA 845
            +++ + +I++YV+QLR VGKGHGVWH +Q L HE GDAA
Sbjct:  209 QVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.141e-65
Identity = 122/210 (58.10%), Postives = 143/210 (68.10%), Query Frame = 2
Query:  116 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAI 745
            L+T S  +   N S     G+L        V A+  +N+ PLTGVVF+PFEEVKKE            AR KY D+CEAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+L +VA RNND Q+ +FVES++L EQVEAI
Sbjct:   23 LSTSSQGFVLKNFSTKSRNGLLV-------VCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAI 225          

HSP 2 Score: 43.1282 bits (100), Expect = 5.141e-65
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 3
Query:  732 RLKQLTKIAKYVSQLRMVGKGHGVWHSNQKLPHE 833
            +++ +  I++YV+QLR VGKGHGVWH +Q L  E
Sbjct:  221 QVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.592e-63
Identity = 124/224 (55.36%), Postives = 143/224 (63.84%), Query Frame = 2
Query:  131 SCYSKSNASLVKLGGI-------LPRTKRSLKVSAAVDAN------------SMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAI 745
            S  S S  SLV   G+       LP    +L+VS+    N            +  L+GVVF+PF+EVKKE            ARQKY DECEAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELALSLEKL NEKLL+L SVA +NND  + +F+ESEFL EQVEAI
Sbjct:    7 SSSSSSALSLVNFHGVKKDVSPLLPSISSNLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAI 230          

HSP 2 Score: 43.8986 bits (102), Expect = 3.592e-63
Identity = 18/35 (51.43%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  720 FWVSRLKQLTKIAKYVSQLRMVGKGHGVWHSNQKL 824
            F   +++ +  I++YV+QLR VGKGHG WH NQ L
Sbjct:  222 FLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQML 256          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 2.611e-61
Identity = 121/186 (65.05%), Postives = 137/186 (73.66%), Query Frame = 2
Query:  194 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            ++L   A  D N+ PLTGVVF+PFEEVKKE            ARQKY D+CEA INEQINVEYNVSYVYHA++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+L SVA +NND Q+ +F+ESEFLGEQVEAI +
Sbjct:   39 KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKK 224          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.886e-60
Identity = 126/213 (59.15%), Postives = 149/213 (69.95%), Query Frame = 2
Query:  116 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            L  GS+  S S     K+GG      R++ V+AA VD N+MP+TGVVFQPFEEVKK             ARQ++ D  EA INEQINVEYNVSYVYH++YAYFDRDN+A++GL                  MEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++  VA  NNDPQ+ +FVESEFLGEQ+EAI +
Sbjct:   22 LPHGSASPSVSLGFSRKVGG-----GRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKK 229          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.770e-60
Identity = 117/181 (64.64%), Postives = 134/181 (74.03%), Query Frame = 2
Query:  209 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            S+ VD N+MP+TGVVFQPFEEVKK             ARQ+Y D  EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GL                  MEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+L  VA  NNDPQ+ +FVESEFLGEQ+EAI +
Sbjct:   48 SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKK 228          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 9.285e-59
Identity = 119/208 (57.21%), Postives = 144/208 (69.23%), Query Frame = 2
Query:  128 SSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            S C S S ++ V  GG      R+++V AA      PLTGV+F+PF+E+KK+            +RQ Y DE EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL + SVADRNND Q+ +F+ESEFL EQVE+I +
Sbjct:   27 SLCSSSSLSASVNGGG-----SRNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKK 229          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 5.504e-58
Identity = 108/189 (57.14%), Postives = 127/189 (67.20%), Query Frame = 2
Query:  185 RTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            R+  SL  +AA       L+GVVFQPFEE+K E            AR K+ D+CEAAINEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L+LEKL NEKL SL  VA R NDPQ+ +F+ESEFL EQ EAIN+
Sbjct:   34 RSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINK 222          

HSP 2 Score: 41.5874 bits (96), Expect = 5.504e-58
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3
Query:  744 LTKIAKYVSQLRMVG-KGHGVWHSNQKLPHE 833
            + K++KYV+QLR VG KGHGVWH +Q L  E
Sbjct:  220 INKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.341e-57
Identity = 111/178 (62.36%), Postives = 131/178 (73.60%), Query Frame = 2
Query:  218 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++ SVADRNNDPQM +F+ESEFL EQVE+I +
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKK 224          
BLAST of DY261477 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 1.751e-57
Identity = 121/193 (62.69%), Postives = 136/193 (70.47%), Query Frame = 2
Query:  176 ILPRTKRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGEFVESEFLGEQVEAINQ 751
            +L      L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL L SVA +N D Q+ +FVESEFLGEQVE+I +
Sbjct:   26 VLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKR 218          
The following BLAST results are available for this feature:
BLAST of DY261477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI4_SOYBN1.046e-6559.42Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI2_TOBAC5.141e-6558.10Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI4_ARATH3.592e-6355.36Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_SOYBN2.611e-6165.05Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_ARATH2.886e-6059.15Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_BRANA3.770e-6064.64Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI3_VIGUN9.285e-5957.21Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI2_MAIZE5.504e-5857.14Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI_MALXI1.341e-5762.36Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI2_VIGUN1.751e-5762.69Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP2YP23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY261477 ID=DY261477; Name=DY261477; organism=Citrus clementina; type=EST; length=1284bp
CTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGCACT
TGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCAGCG
AAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCTAAGTCTAA
TGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGAGTC
TGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGGGTC
GTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCCTGT
TTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTGAGG
CCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTGTAC
CATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCT
TGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGA
AGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCC
ATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGCCCT
GTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGC
TTCTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGA
GAATTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACCA
AGATCGCCAAATATGTTTCCCAACTTAGGATGGTTGGGAAAGGCCACGGA
GTATGGCACTCCAATCAAAAGCTTCCCCACGAGGGGGATGCCGCCTGAAG
AAAAAACAAAATTGTAACCTTTTCCTTGGGGGGTTAATCCACTCCTTTGG
CCGCCAAAATGTTTTGAAAATATCCCGCCCCACAGGAGGGTTGAATGGTG
TTGGTCCAAAAAATAAGGCTGAAAACACTGAAAAATTCCCTACAAAAACC
AAACCTCCAAAAAACCCCCCTCGGCTTTTTCAAAATTTCAGGGGCGTGCC
CCTTTCAAAAAAAATCCTTATTTTATAGGGGGCTTTTTTCCTCTTAATAT
AGAAAACAAAACCAGAGGGTGCGGGGGGGATACAAATAAATATCTTAAAA
AACTAAACAAACCACCAAACATCTTCCTCACTATGCGAAGTCGGAGAAAG
AAAAAACATAATATAAAAGGGATTGTGCTGTGGTCTCCTACACCATGAAT
GGCCTTACTGGCTCTACTTATCATCCCGCCGCCC
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