DY262502

Overview
NameDY262502
Unique NameDY262502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1310
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_NEMVE (Cell division cycle protein 123 homolog OS=Nematostella vectensis GN=cdc123 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.028e-37
Identity = 90/212 (42.45%), Postives = 123/212 (58.02%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALSEKK 944
            M ++ V  C    WYP+FK+V+IR+ I  L + FV+YL  D    +LP   S+   LP    +  + E+++  E   +               KIKE+I+ LGG VFPKLNWSAP+DA+WIS   TLRC S  +I LLL+SSD++   LC A+  C D +     SF L LRKW  ++ P MEFRCFVR   LV ISQR+++  Y  L+E +
Sbjct:    1 MKQQHVENCNFSSWYPRFKNVTIRSKIIPLSKEFVDYLKTDG--VVLPGKPSS---LPRHEDDESDSEEWQNLEEDPEQATVEAPEFNDIDT-KIKEAIQELGGEVFPKLNWSAPRDASWISHDNTLRCKSPGDIYLLLKSSDTIDRVLCDAFIHCEDNSTQTHDSFELILRKW-QNIYPAMEFRCFVRNNELVAISQRDISNYYHFLAENE 205          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_XENLA (Cell division cycle protein 123 homolog OS=Xenopus laevis GN=cdc123 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.028e-36
Identity = 96/258 (37.21%), Postives = 141/258 (54.65%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG*NF--EFHPWG 1073
            M +E+V  CQ  +WYP FK  SIR++I  LPE   +YLLDD    L+ +          R  N  EE++ + S+   +              +K++E+I SLGG+VFPKLNWS+P+DA WI+ + +L+CT+  +I LL +SSD + HD    +  C D +      + L LRKW   L P  EFRCFVR   L+GISQR+ T  Y  +S +K+ I K     F +  +     E+  FD+ Y+   G  +  +F+P+G
Sbjct:    1 MKKEQVLNCQFGQWYPTFKKFSIRSVIIPLPENVKDYLLDDGT--LVVSGREESPGCSQRDLNCTEEDEVQWSDD--ESTATLTAPEFPEFSIKVQEAINSLGGSVFPKLNWSSPRDAYWIALNSSLKCTTLSDIFLLFKSSDFVTHDFTQPFIYCADDSPDPNIKYELVLRKWC-ELIPGAEFRCFVRENKLIGISQRDYTQYYDHISKQKEEIRKSIQYFFQEHIQYNFPDEDFVFDI-YKDSQGKIWLIDFNPFG 252          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_RAT (Cell division cycle protein 123 homolog OS=Rattus norvegicus GN=Cdc123 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.754e-36
Identity = 92/257 (35.80%), Postives = 141/257 (54.86%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG-*NFEFHPWG 1073
            M +E V+ CQ   WYP F+S++I+++I  LP+   +YLLDD     L  S   D    ++  +  E E+ + S+   +               +++E+I SLGG+VFPKLNWSAP+DA WI+ + +L+C S  +I LL +SSD + HD    +  CND +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I +C    F +  + +   E+  FD+  + R      +F+P+G
Sbjct:    1 MKKEHVSHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDG---TLVVSGREDPPTCSQPDSGDEAEETQWSDD--ESTATLTAPEFPEFNTQVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKSLSDIFLLFKSSDFITHDFTQPFIHCNDDSPDPCIEYELVLRKWC-ELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEEICRCIQDFFKEHLQYKFLDEDFVFDIYRDSRGKVWLIDFNPFG 251          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_XENTR (Cell division cycle protein 123 homolog OS=Xenopus tropicalis GN=cdc123 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.103e-36
Identity = 92/258 (35.66%), Postives = 141/258 (54.65%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG*NF--EFHPWG 1073
            M +E+V  CQ  +WYP+FK +SIR+++  LPE   +YLLDD G  ++     +       +++  E+E   V     +              +K++E+I SLGG+VFPKLNWS+P+DA WI+ + +L+C +  +I LL +SSD + HD    +  C D +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I K     F +  +     E+  FDV Y+   G  +  +F+P+G
Sbjct:    1 MKKEQVLNCQFSQWYPRFKKLSIRSVVIPLPENVKDYLLDD-GTLVVSGREESPGCSQRDLNSTAEDE---VQWSDDENTATLKAPEFPEFSIKVQEAINSLGGSVFPKLNWSSPRDAYWIALNSSLKCQTLSDIFLLFKSSDFVTHDFTQPFIYCADDSPDPNIKYELVLRKWC-ELIPGAEFRCFVKENNLIGISQRDYTQYYDHISKQKEEIRKSIQYFFQEHIQYNFPDEDFVFDV-YKDSQGKIWLIDFNPFG 252          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_MOUSE (Cell division cycle protein 123 homolog OS=Mus musculus GN=Cdc123 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.485e-35
Identity = 90/257 (35.02%), Postives = 140/257 (54.47%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG-*NFEFHPWG 1073
            M +E V+ CQ   WYP F+S++I+++I  LP+   +YLLDD     L  S   D    ++  +  E E+ + S+   +               +++E+I SLGG+VFPKLNWSAP+DA WI+ + +L+C +  +I LL +SSD + HD    +  C D +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I +C    F +  + +   E+  FD+  + R      +F+P+G
Sbjct:    1 MKKEHVSHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDG---TLVVSGREDPPTCSQSDSGNEAEETQWSDD--ESTATLTAPEFPEFNTQVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITHDFTQPFIHCTDDSPDPCIEYELVLRKWC-ELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEEICRCIQDFFKEHLQYKFLDEDFVFDIYRDSRGKVWLIDFNPFG 251          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_HUMAN (Cell division cycle protein 123 homolog OS=Homo sapiens GN=CDC123 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.642e-35
Identity = 89/257 (34.63%), Postives = 133/257 (51.75%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG-*NFEFHPWG 1073
            M +E V  CQ   WYP F+ V+I+++I  LP+   +YLLDD         VS  D  P       ++E   +     +               K++E+I SLGG+VFPKLNWSAP+DA WI+ + +L+C +  +I LL +SSD +  D    +  C D +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I +C    F +  + +   E+  FD+  + R      +F+P+G
Sbjct:    1 MKKEHVLHCQFSAWYPFFRGVTIKSVILPLPQNVKDYLLDDG-----TLVVSGRDDPPTHSQPDSDDEAEEIQWSDDENTATLTAPEFPEFATKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCIEYELVLRKWC-ELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEEIRRCIQDFFKKHIQYKFLDEDFVFDIYRDSRGKVWLIDFNPFG 251          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_MACFA (Cell division cycle protein 123 homolog OS=Macaca fascicularis GN=CDC123 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.624e-35
Identity = 88/257 (34.24%), Postives = 133/257 (51.75%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG-*NFEFHPWG 1073
            M +E V  CQ   WYP F+ V+I+++I  LP+   +YLLDD         VS  D  P       ++E   +     +               +++E+I SLGG+VFPKLNWSAP+DA WI+ + +L+C +  +I LL +SSD +  D    +  C D +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I +C    F +  + +   E+  FD+  + R      +F+P+G
Sbjct:    1 MKKEHVLHCQFSAWYPLFRGVTIKSVILPLPQNVKDYLLDDG-----TLVVSGRDDPPTHSQPDSDDEAEEIQWSDDENTATLTAPEFPEFATQVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCIEYELVLRKWC-ELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEEICRCIQDFFKKHIQYKFLDEDFVFDIYRDSRGKVWLIDFNPFG 251          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_BOVIN (Cell division cycle protein 123 homolog OS=Bos taurus GN=CDC123 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.624e-35
Identity = 88/257 (34.24%), Postives = 134/257 (52.14%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALS-EKKMILKC*SKTF*QQCETRIESENTHFDVMYEGRAG-*NFEFHPWG 1073
            M +E V  CQ   WYP F+S++I+++I  LP+   +YLLDD         VS  +  P       ++E   +     +               K++E+I SLGG+VFPKLNWSAP+DA WI+ + +L+C +  +I LL +SSD +  D    +  C D +      + L LRKW   L P  EFRCFV+   L+GISQR+ T  Y  +S +K+ I +C    F +  + +   E+  FD+  + R      +F+P+G
Sbjct:    1 MKKEHVLHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDG-----TLVVSGREDPPAHSQPDSDDEAEEIQWSDDENTATLTAPEFPEFTTKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCMEYELVLRKWC-ELIPGAEFRCFVKENKLIGISQRDYTQYYDHISKQKEEICRCIQDFFKKHIQYKFLDEDFVFDIYRDSRGKVWLIDFNPFG 251          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_DANRE (Cell division cycle protein 123 homolog OS=Danio rerio GN=cdc123 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.897e-33
Identity = 77/212 (36.32%), Postives = 122/212 (57.55%), Query Frame = 3
Query:  309 MTEEEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPASVSNDDALPNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALSEKK 944
            M +E+V  CQ   WYP FK  +I++LI  +P+  ++YLLDD    L+ +   N+++     ++  +EED + ++   +              +K++E+I  LGG +FPKLNWSAP+DA WI+ + +L+C S  EI LL +SSD + HDL   +  C+D +     ++ L LRKW   L P  EFRCFV+   L+ I QR+ T  Y  + +++
Sbjct:    1 MKKEQVVNCQFSVWYPLFKKHTIKSLILPIPQNVIDYLLDDGT--LVVSGSENNNSQTQANNSDSDEEDIQWTDD--ETTTTVTAPEFPEFNVKVQEAINVLGGCIFPKLNWSAPRDANWIALNSSLQCQSLSEIFLLFKSSDFITHDLTQPFLHCSDDSPDPTINYELVLRKW-SELIPGGEFRCFVKENKLIAICQRDYTQHYQHIGKQE 207          
BLAST of DY262502 vs. ExPASy Swiss-Prot
Match: CD123_DICDI (Cell division cycle protein 123 homolog OS=Dictyostelium discoideum GN=cdc123 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.699e-31
Identity = 86/239 (35.98%), Postives = 122/239 (51.05%), Query Frame = 3
Query:  318 EEVNRCQIQEWYPKFKSVSIRTLIHELPEYFVEYLLDDSGPFLLPAS------VSNDDAL-----------------PNRIHNAFEEEDYRVSEGSGDXXXXXXXXXXXXXXLKIKE-------SIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIVLLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGRCLVGISQREVTMCYPALSEKK 944
            E   +CQ QEWY KFKSV+  +++  LP+ F++YL  D   F  P        V   D L                 P       +EED    +   +               + KE       SIE LGG +FPKLNWS+PKDA+W++   +L+CT+  +I LLL+SSD + HDL     + +DK  +  P + L LRKW  +L+P MEFRCFV+   L+GISQR+++  +  L +KK
Sbjct:   10 ENKKQCQFQEWYEKFKSVTFSSIVIPLPKIFIDYLQSDQ--FTTPHEGFPEFKVDEHDDLFDDNNWSTSKNHISTLDPKYYQGYSDEEDESSDDDDSNDNDKDKKPKRIVNETEFKELSNQIIKSIEKLGGNIFPKLNWSSPKDASWMNVYNSLKCTNTTDIYLLLKSSDFINHDLMQFSINQDDKDDSLTP-YVLVLRKW-QNLQPSMEFRCFVKDNQLLGISQRDISTYFKFLKDKK 244          
The following BLAST results are available for this feature:
BLAST of DY262502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
CD123_NEMVE6.028e-3742.45Cell division cycle protein 123 homolog OS=Nematos... [more]
CD123_XENLA1.028e-3637.21Cell division cycle protein 123 homolog OS=Xenopus... [more]
CD123_RAT1.754e-3635.80Cell division cycle protein 123 homolog OS=Rattus ... [more]
CD123_XENTR5.103e-3635.66Cell division cycle protein 123 homolog OS=Xenopus... [more]
CD123_MOUSE1.485e-3535.02Cell division cycle protein 123 homolog OS=Mus mus... [more]
CD123_HUMAN5.642e-3534.63Cell division cycle protein 123 homolog OS=Homo sa... [more]
CD123_MACFA9.624e-3534.24Cell division cycle protein 123 homolog OS=Macaca ... [more]
CD123_BOVIN9.624e-3534.24Cell division cycle protein 123 homolog OS=Bos tau... [more]
CD123_DANRE6.897e-3336.32Cell division cycle protein 123 homolog OS=Danio r... [more]
CD123_DICDI1.699e-3135.98Cell division cycle protein 123 homolog OS=Dictyos... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AF05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262502 ID=DY262502; Name=DY262502; organism=Citrus clementina; type=EST; length=1310bp
CAAACAGCCGACACCAGCCACACCGACACACCTTCAGTCGTCGCTGCCTC
ACTCACAGCCATCATCACTGTCGACCGTCGCAAGCCCAGCACTGCAGCTG
CCGGCAGGCAACCACGCGAGTCGCGACGAACCTGCACCAGCAGCGGCTGC
AGCGCGACGCACGGACGCCAGCAGCAATGAACCCACTCTAAGCCTTGTAT
CCAGCATAGTAGCATACCCACGTGATCTATTGATCTTTGAGATAATAGAA
GGAGTTTCAGTGCTTTAATACATTGACCGTGCTGAGCCATTATTCTACAA
TGTTAGGAATGACAGAGGAAGAAGTTAACCGTTGCCAGATTCAAGAATGG
TACCCAAAATTTAAATCTGTGTCCATAAGAACCCTGATTCATGAGCTTCC
AGAATATTTTGTGGAGTACCTTCTTGATGATTCTGGGCCCTTTCTCCTTC
CCGCTTCCGTTTCAAATGACGATGCGCTGCCAAATAGAATCCACAATGCT
TTTGAAGAAGAGGACTATCGGGTCTCTGAAGGATCTGGAGATGAAGCAGA
ACCTTCATCTCCTCCATCTTTTCCAGAACTAGAATTAAAGATCAAGGAAT
CTATTGAATCCCTTGGGGGTGCAGTTTTCCCTAAGCTGAATTGGAGTGCA
CCAAAAGATGCCGCTTGGATCAGCACTTCTGGGACCCTTCGATGCACTTC
ATTCTGTGAGATCGTACTCTTACTACGGTCATCTGATTCCTTGGTTCATG
ATTTGTGTCATGCATATGATTCATGCAATGATAAGACCTTGACAAGACCA
CCAAGTTTCTTTCTCGCCCTCCGCAAGTGGTATCCATCCTTACGACCAGA
GATGGAGTTCCGATGTTTCGTACGTGGTCGGTGCCTAGTTGGAATTTCCC
AGCGAGAGGTCACGATGTGTTATCCTGCTCTATCTGAGAAGAAAATGATA
TTAAAGTGTTGATCCAAGACTTTTTGACAGCAATGTGAGACAAGAATTGA
ATCAGAAAATACACATTTTGATGTTATGTACGAAGGAAGAGCGGGGTAAA
ATTTTGAATTTCATCCCTGGGGTGCTTTACCTTGGCCTCGCTTTTTTCCT
GGGAAGGAATTGAACAAAACCTTGGGGAAAAAAGGGAATAATGGGAAATT
AAAATTGGGGAAAAACCAAGTGCCTTTTTAGGCCAGGGTTTAAAAAAACA
CCCCTCCCCTTTAAATAAATATAAAAAATAAACCCGGGGGGGAGGGTGGG
TGGGGGTATAATTTTTTTTTAGAAAAAAGTGGCCGAAAGAAAAAAAAATT
TTGCGTCCGC
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