DY262514

Overview
NameDY262514
Unique NameDY262514
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262514 vs. ExPASy Swiss-Prot
Match: EIL2_ARATH (ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.126e-12
Identity = 48/126 (38.10%), Postives = 59/126 (46.83%), Query Frame = 2
Query:  188 LQQLPHITLGYLLYALVPHCGPPHTGFHLEKDVSPLLAPTGKKNGGRDWVCQ-------RSRCPTLKNPDKLKKACKSGSLQGVSNKAPRNFKNSKVGGAI*R---LPKIIHPRKGAIGLAFFIQE 535
            L +L   TLG LL AL PHC PP   F LEK V+P   PTGK+    DW  Q       R   P  K P  LKK  K G L GV      +  N  +   + R   L + +  R+GA+ LA   +E
Sbjct:  181 LLELQDTTLGALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKE----DWWDQLSLPVDFRGVPPPYKKPHDLKKLWKIGVLIGVIRHMASDISN--IPNLVRRSRSLQEKMTSREGALWLAALYRE 300          

HSP 2 Score: 34.6538 bits (78), Expect = 3.126e-12
Identity = 21/41 (51.22%), Postives = 23/41 (56.10%), Query Frame = 1
Query:    1 VYEMSPETRYPETAASDNLCNR*KDKVPVDRNGPAAIAK*Q 123
            VY +  E       +SDNL    KDKV  DRNGPAAI K Q
Sbjct:  118 VYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQ 158          
BLAST of DY262514 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12
Identity = 43/98 (43.88%), Postives = 51/98 (52.04%), Query Frame = 2
Query:  128 DNSFPAKIRRFNAIGPLPHTLQQLPHITLGYLLYALVPHCGPPHTGFHLEKDVSPLLAPTGKKNGGRDWVCQRSRCPT-LKNPDKLKKACKSGSLQGV 418
            +N+ P      N IGP PHTLQ+L   TLG LL AL+ HC PP   F LEK V P   P GK++        + + P   K P  LKKA K G L  V
Sbjct:  158 ENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAV 255          
BLAST of DY262514 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 42/89 (47.19%), Postives = 46/89 (51.69%), Query Frame = 2
Query:  167 IGPLPHTLQQLPHITLGYLLYALVPHCGPPHTGFHLEKDVSPLLAPTGKKNGGRDWVCQ-----RSRCPTLKNPDKLKKACKSGSLQGV 418
            +GP PHTLQ+L   TLG LL AL+ HC PP   F LEK VSP   P    NG  +W  Q         P  K P  LKKA K G L  V
Sbjct:  173 VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWP----NGNEEWWPQLGLPNEQGPPPYKKPHDLKKAWKVGVLTAV 257          
The following BLAST results are available for this feature:
BLAST of DY262514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
EIL2_ARATH3.126e-1238.10ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidops... [more]
EIN3_ARATH8.305e-1243.88Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH5.383e-1147.19ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100AG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262514 ID=DY262514; Name=DY262514; organism=Citrus clementina; type=EST; length=738bp
GTCTATGAAATGAGTCCGGAAACACGATATCCTGAGACTGCGGCATCCGA
CAATCTATGTAACCGCTGAAAAGATAAGGTCCCGGTTGATCGCAACGGTC
CAGCTGCTATAGCAAAATAACAAGCTAGATAACTCATTCCCTGCCAAGAT
TAGACGCTTTAACGCAATTGGTCCACTCCCTCATACCTTGCAACAGTTAC
CACACATCACCCTAGGTTACCTCTTGTATGCTCTCGTGCCCCACTGTGGT
CCTCCTCATACGGGGTTTCACCTGGAAAAAGATGTTTCCCCCCTATTGGC
ACCCACAGGAAAAAAGAATGGGGGCCGTGATTGGGTTTGCCAAAGATCAA
GGTGTCCCACCTTAAAAAACCCGGATAAATTAAAAAAAGCCTGCAAAAGC
GGTAGCTTACAAGGCGTGTCAAACAAAGCTCCTAGAAATTTCAAAAATTC
CAAAGTTGGGGGGGCAATTTAAAGGCTTCCAAAAATTATACACCCAAGGA
AAGGGGCCATTGGGCTGGCCTTTTTTATACAAGAAGGGAGCCGTGGCCCC
GAAAAATTTTTCCCCAATCTTTGAACATGGGTGTTCCCTACTCCCCCCAG
AAGGTAAATTTTTGGGACCCATATAAGAAAAAAAAAGAAGAAAAAAAAAG
ATGTAGAAAGGGGGGTGCAAAACAAAAAAAAAACCACAAAATTTTTATAA
TATAGACAAAAGAAAAAGGGAATAAACCCCCCCACAAA
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