DY262525

Overview
NameDY262525
Unique NameDY262525
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1300
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262525 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 6.389e-23
Identity = 80/304 (26.32%), Postives = 129/304 (42.43%), Query Frame = 3
Query:  192 ESVLEMLAKDQARLQFLSSLAVARKSV-VPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWV---PCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLTYG-SSTIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQXXXXXXXXXXXXXAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPI--GQPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGGLQFNPTTGAGTIIDSGTVFYRLVAPAYTAMKDVVPKTWKGVT*TVNIPRRDSN 1082
            E +   + + + R++ ++++  +   +  P+ +G        Y++   IGTP  +    MDT +D  W    PCT C    + +FN   S++F  L C++  C+ +P+ TC    C +   YG  ST    ++ +T +  T  VP   FGC +   G                   +    L    FSYC+ S+ + S S +L LG    G P+    T L+ +    + YY+ L  I VG   + IP    Q       G IIDSGT    L   AY A+        +  T  +N+P  D +
Sbjct:   59 ELIKRAIKRGERRMRSINAMLQSSSGIETPVYAG-----DGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGEDNQG--FGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCMTSYGSSSPS-TLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVA-------QAFTDQINLPTVDES 347          
BLAST of DY262525 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.578e-21
Identity = 70/245 (28.57%), Postives = 107/245 (43.67%), Query Frame = 3
Query:  315 YIVRAKIGTPAQTLLMAMDTSNDAAWV---PCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLTYG-SSTIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQXXXXXXXXXXXXXAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPI------GQPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGGLQFNPTTG-AGTIIDSGTVFYRLVAPAYTAMK 1016
            Y++   IGTPAQ     MDT +D  W    PCT C   S+ +FN   S++F  L C +  C+ + +PTC    C +   YG  S    ++  +T++  +  +P  TFGC +   G                   +    L  + FSYC+    + S   +L LG +      G P     T L+++ +  + YY+ L  + VG   + I P     N   G  G IIDSGT     V  AY +++
Sbjct:   95 YLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGENNQG--FGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGS-STPSNLLLGSLANSVTAGSPN----TTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVR 332          
The following BLAST results are available for this feature:
BLAST of DY262525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP2_NEPGR6.389e-2326.32Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPGR4.578e-2128.57Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100AH05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262525 ID=DY262525; Name=DY262525; organism=Citrus clementina; type=EST; length=1300bp
AAGAAGAAAAAAAAAAATTCAAAGCCATGAAACCTCAACTAGTCTTCTTT
CTAGCCTTCCTTTTCTTGTTCTCCCTTTCTGAAGGCCTAAACCCTATATG
TGACACCCAAGACCATAGCTCAACTCTCCAAGTTTTTCATGTTTTCAGCC
CATGCTCTCCTTTTAAGCCGTCAAAGCCACTTTCATGGGAAGAAAGTGTG
CTCGAAATGCTGGCCAAAGATCAGGCACGGCTGCAGTTCTTGTCCAGCCT
TGCTGTCGCTCGGAAATCTGTTGTGCCCATAGCCTCTGGCAGGCAGATCA
CCCAAAGCCCTACTTATATTGTTAGGGCAAAAATTGGGACACCGGCACAA
ACCTTGCTCATGGCCATGGATACTAGCAATGATGCTGCTTGGGTTCCATG
CACTGGCTGTGTTGGCTGCTCTTCCACTGTTTTTAATTCTGCTCAATCCA
CCACATTCAAAAACCTTGGTTGCCAAGCTGCTCAATGCAAGCAGGTACCT
AATCCCACCTGCGGGGGTGGCGCGTGTGCATTCAATTTGACCTACGGCAG
CTCCACCATTGCCGCAAACCTCTCACAGGACACTATCTCCCTGGCCACTG
ATATAGTCCCTGGTTACACCTTCGGCTGCATCCAAAAGGCCACGGGCAAC
TCGGTGCCGCCCCAAGGCCTGTTGGGCCTGGGTCGTGGCTCATTATCCCT
TTTGGCACAAACACAGAACCTCTATCAGTCCACTTTTTCTTACTGTTTGC
CCAGCTTCAAGGCACTTAGCTTTTCTGGGTCATTAAGATTAGGACCCATT
GGTCAGCCCAAGCGGATTAAGTATACACCATTGCTTAAAAACCCAAGAAG
ATCATCACTTTACTATGTTAATTTGTTGGCCATTAGGGTTGGCAGAAGAG
TTGTTGATATCCCACCTGGTGGCTTACAGTTCAATCCCACAACCGGCGCT
GGCACTATTATTGATTCTGGCACAGTTTTTTACAGACTGGTGGCGCCCGC
TTACACGGCAATGAAAGACGTGGTCCCGAAGACGTGGAAGGGAGTAACTT
AAACAGTGAACATCCCTAGGCGGGATTCCAACAGGGGCTAATTCGGTCCC
AATCCGTTGCCCCCCAAAAATCCCGTTAAGTTTCCCAGGGGAAGGACCGG
TACCTCCACCCAAAAAAAAACCCTTTCAAATCCAAAAACACCTGAGGGGG
AACCACCACAGGGCTTTGGCCGCGGGGGGTGCCGCGCCCCCACAAAAACA
GCTCACAACTTTAAGGGTGTTAAAATGTTTTTGTTGTCCCCAAATTAGGA
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