DY262529

Overview
NameDY262529
Unique NameDY262529
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262529_ssr708 microsatellite DY262529_ssr708:708..719. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: AGAL_COFAR (Alpha-galactosidase OS=Coffea arabica PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.805e-64
Identity = 112/157 (71.34%), Postives = 128/157 (81.53%), Query Frame = 3
Query:    3 KSFASWGVDYLNYDNCFNTGTCPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQDK 473
            K+FASWGVDYL YDNC N    PKERYPIMS  LLNSGR+IFFSLCEWG EDPATWA ++GNSWRTTGDI D+W+SMTS AD ND W SYAGPG +NDPDMLE G GGM T +YR+HF+IWALAKA LLIGC I +M+  TF +LSN ++ + NQDK
Sbjct:  132 KTFASWGVDYLKYDNCNNNNISPKERYPIMSKALLNSGRSIFFSLCEWGEEDPATWAKEVGNSWRTTGDIDDSWSSMTSRADMNDKWASYAGPGGWNDPDMLEVGNGGMTTTEYRSHFSIWALAKAPLLIGCDIRSMDGATFQLLSNAEVIAVNQDK 288          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: AGAL_CYATE (Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.479e-62
Identity = 112/175 (64.00%), Postives = 131/175 (74.86%), Query Frame = 3
Query:    3 KSFASWGVDYLNYDNCFNTGTCPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQDKPWNSREESQKRKENLEGW 527
            K+FASWGVDYL YDNC N G   KERYP M   LL+SGR IFFS+CEWG EDP  WA  IGNSWRTTGDI+DNWNSMTS+AD ND W SYAGPG +NDPDMLE G GGM TE+YR+HF+IWALAKA LL+GC I AM+  T  ++SN ++ + NQDK    + +  K   +LE W
Sbjct:  164 KTFASWGVDYLKYDNCENLGISVKERYPPMGKALLSSGRPIFFSMCEWGWEDPQIWAKSIGNSWRTTGDIEDNWNSMTSIADSNDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLVGCDIRAMDDTTHELISNAEVIAVNQDK-LGVQGKKVKSTNDLEVW 337          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: AGAL_ORYSJ (Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.823e-55
Identity = 99/156 (63.46%), Postives = 118/156 (75.64%), Query Frame = 3
Query:    3 KSFASWGVDYLNYDNCFNTGTCPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            K+FASWGVDYL YDNC + G    ERY  MS  +   G+ IFFSLCEWG+E+PATWA ++GNSWRTTGDI DNW SMTS AD ND W +YAGPG +NDPDMLE G GGM   +YR+HF+IWALAKA LLIGC + +M + T  ILSN ++ + NQD
Sbjct:  172 KTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQD 327          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: AGAL_DICDI (Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36
Identity = 71/156 (45.51%), Postives = 104/156 (66.67%), Query Frame = 3
Query:    3 KSFASWGVDYLNYDNCFNTGTCPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            +++A WG+DY+  D C+ T   P++RY IMS  L  +GR +FFSLC+WG E+P T+   +GNSWRTT DIKDNW+SM S        TS++G G +NDPDM+  G GGM   +Y +HF++W+L  A L+ GC +  +++ T  IL+  ++ + NQD
Sbjct:  134 QTYAEWGIDYVKEDWCYATLENPQQRYQIMSQALNATGRPMFFSLCDWGYENPWTFGMSVGNSWRTTPDIKDNWDSMLSNLMAQAPITSFSGIGGFNDPDMMMVGNGGMSNTEYVSHFSLWSLLNAPLIAGCDLIDIDQETLSILTASEVIAINQD 289          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: AGAL_SCHPO (Probable alpha-galactosidase OS=Schizosaccharomyces pombe GN=SPAC869.07c PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28
Identity = 74/195 (37.95%), Postives = 101/195 (51.79%), Query Frame = 3
Query:    6 SFASWGVDYLNYDNCFNTGTC-----PKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWN---------------------SMTSLADHNDNWTSYAGPGD-YNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQDKPWNSREESQKRK 509
            +FA WGVDYL YDNCFN G         ERY  MS  L  +GR IF+SLC+WG +    W   I NSWR +GDI D ++                     S+ ++       +S AG    +ND D LE G GGM  E+Y+ HF +WA+ K+ L++G  + +M  +   I+SNK++ S NQD   N      K+K
Sbjct:  142 TFADWGVDYLKYDNCFNEGKSGVPLISYERYKRMSDALNKTGRPIFYSLCQWGEDFVWNWGNTIANSWRISGDIFDTFSRKDVRCPCETIECFALQGDHCSVMNIISKASFLSSKAGMNSGWNDLDSLEVGNGGMSFEEYKTHFTMWAILKSPLILGNDVSSMSPMDKLIVSNKELISINQDIGTNPAALIWKKK 336          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: MEL_ZYGCI (Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.755e-26
Identity = 64/182 (35.16%), Postives = 93/182 (51.10%), Query Frame = 3
Query:    6 SFASWGVDYLNYDNCFNTGT-----CPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWN----------------------SMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            +FASW VDYL YDNC+N G         +RY  MS  L  +GR IF+SLC WG++    W   I NSWR +GD+   ++                      S+ ++ +        A PG +ND DMLE G+G M   +  AHF++WA+ K+ L+IG  I  ++  +  + SN  + + NQD
Sbjct:  136 TFASWDVDYLKYDNCYNKGEFGTPEISYKRYKAMSDALNKTGRPIFYSLCNWGQDLTFYWGSAISNSWRMSGDVYPQFDRPDSRCPCSGDEYDCSYPGFHCSIMNILNKAAPMGQNAAPGGWNDLDMLEVGVGNMSDSEEVAHFSMWAIVKSPLIIGADIDDLKDSSLSVYSNPAVIAINQD 317          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: MEL_ZYGMR (Alpha-galactosidase OS=Zygosaccharomyces mrakii GN=MEL PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.352e-25
Identity = 65/181 (35.91%), Postives = 94/181 (51.93%), Query Frame = 3
Query:    9 FASWGVDYLNYDNCFNTGT-----CPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADHNDNW--TSYAG--------------------PGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            FA   VDYL YDNC+N G         ERY  MS  L N+GR IF+SLC WG++    W   I NSWR +GDI  +++   S     D+     YAG                    PG +ND DMLE G+G +  ++ +AHF++WA+ ++ L+IG  +  ++  +F I +   + + NQD
Sbjct:  138 FARNEVDYLKYDNCYNKGQFGTPQASYERYKAMSDALNNTGRPIFYSLCNWGQDLTFYWGSAIANSWRMSGDITADFDRPDSRCPCGDDEYDCKYAGYHCSIMNILNKAAPMGQNANPGGWNDLDMLEVGVGNLTDDEEKAHFSMWAMVRSPLIIGADVNHLKPSSFSIYAQSPVIAINQD 318          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: MEL_SACPS (Alpha-galactosidase OS=Saccharomyces pastorianus GN=MEL PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.257e-24
Identity = 63/181 (34.81%), Postives = 94/181 (51.93%), Query Frame = 3
Query:    9 FASWGVDYLNYDNCFNTGT--CPK---ERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWN----------------------SMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            FAS GVDYL YDNC+N G    P+   +RY  MS  L  +GR IF+SLC WG++    W   I NSWR +GDI   +                       S+ ++ +        AG G +ND D LE G+G +  ++ +AHF++WA+ K+ L+IG  +  ++  ++ I S   + + NQD
Sbjct:  138 FASNGVDYLKYDNCYNKGQFGAPETSYKRYKAMSDALNKTGRPIFYSLCNWGQDLTHYWGSDIANSWRMSGDIYPQFTRPDSRCPCDGDQFDCAYAGFHCSIMNILNKAAPMGQNAGIGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLVIGADVNHLKASSYSIYSQASVIAINQD 318          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: MEL_SACMI (Alpha-galactosidase OS=Saccharomyces mikatae GN=MEL PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 64/181 (35.36%), Postives = 93/181 (51.38%), Query Frame = 3
Query:    9 FASWGVDYLNYDNCFNTGT-----CPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLA--DHNDNWTSYAG--------------------PGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            FA  GVDYL YDNC+N G         +RY  MS  L  +GR IF+SLC WG++    W   I NSWR +GDI   ++   S    D +    SYAG                     G +ND D LE G+G +  ++ +AHF++WA+ K+ L+IG  +  +++ ++ I S   + + NQD
Sbjct:  138 FARNGVDYLKYDNCYNKGKFGTPETSYKRYKAMSDALNKTGRPIFYSLCNWGQDLTFYWGSDIANSWRMSGDIYPEFDRPDSRCPCDGDQYDCSYAGFHCSIMNILNKAAPMGQNAGIGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGADVNHLKESSYSIYSQASVIAINQD 318          
BLAST of DY262529 vs. ExPASy Swiss-Prot
Match: MEL1_YEAST (Alpha-galactosidase 1 OS=Saccharomyces cerevisiae GN=MEL1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 3
Query:    9 FASWGVDYLNYDNCFNTGT-----CPKERYPIMSIPLLNSGRTIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWN----------------------SMTSLADHNDNWTSYAGPGDYNDPDMLEFGIGGMITEDYRAHFNIWALAKASLLIGCHIPAMEKITFYILSNKKMDSFNQD 470
            FA+  VDYL YDNC+N G          RY  MS  L  +GR IF+SLC WG++    W   I NSWR +GD+   +                       S+ ++ +        AG G +ND D LE G+G +  ++ +AHF++WA+ K+ L+IG ++  ++  ++ I S   + + NQD
Sbjct:  138 FANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPIFYSLCNWGQDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKAAPMGQNAGVGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQASVIAINQD 318          
The following BLAST results are available for this feature:
BLAST of DY262529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
AGAL_COFAR2.805e-6471.34Alpha-galactosidase OS=Coffea arabica PE=1 SV=1[more]
AGAL_CYATE4.479e-6264.00Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=... [more]
AGAL_ORYSJ1.823e-5563.46Alpha-galactosidase OS=Oryza sativa subsp. japonic... [more]
AGAL_DICDI1.895e-3645.51Probable alpha-galactosidase OS=Dictyostelium disc... [more]
AGAL_SCHPO1.454e-2837.95Probable alpha-galactosidase OS=Schizosaccharomyce... [more]
MEL_ZYGCI6.755e-2635.16Alpha-galactosidase OS=Zygosaccharomyces cidri GN=... [more]
MEL_ZYGMR3.352e-2535.91Alpha-galactosidase OS=Zygosaccharomyces mrakii GN... [more]
MEL_SACPS8.257e-2434.81Alpha-galactosidase OS=Saccharomyces pastorianus G... [more]
MEL_SACMI1.078e-2335.36Alpha-galactosidase OS=Saccharomyces mikatae GN=ME... [more]
MEL1_YEAST1.557e-2232.60Alpha-galactosidase 1 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AH09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262529 ID=DY262529; Name=DY262529; organism=Citrus clementina; type=EST; length=798bp
CAAAATCCTTTGCTTCCTGGGGAGTTGATTACTTGAATTATGATAATTGC
TTTAATACTGGTACATGCCCTAAAGAAAGATATCCGATAATGAGCATACC
ATTATTAAACTCTGGAAGGACAATCTTTTTCTCTCTATGTGAATGGGGAC
GAGAAGATCCTGCTACTTGGGCTCCAAAAATTGGAAATAGTTGGAGAACC
ACAGGTGACATAAAAGACAACTGGAACAGCATGACATCTCTAGCAGATCA
TAATGATAATTGGACATCTTATGCTGGACCTGGAGACTATAATGACCCTG
ATATGCTTGAATTTGGAATTGGAGGCATGATAACCGAAGATTATCGTGCA
CATTTTAACATTTGGGCTCTAGCTAAGGCTTCTTTATTGATTGGATGCCA
TATTCCAGCAATGGAAAAAATAACTTTTTATATACTCAGCAACAAGAAAA
TGGATTCTTTTAACCAAGATAAACCTTGGAATTCAAGGGAAGAAAGTCAA
AAAAGGAAAGAAAATCTTGAAGGTTGGGGCAAGTCCCTTTAATTGGGAAA
AAAAAAAAAGAATAAGTGCTTTTTGAAAAAAAGTTTCTTCCAAAAGCACA
AATTTTATGGGATAATTTGGGTCGAAAAATTTGGCCTTAAAACTTTAAAT
CTTTTTCACCTTGGTGACAAAGAGGGAGGGAAATTTTTTTTCACACAACA
AAAAACCTCTTTCTTTCTTAAACCATGGGGGAAAAAATATCTCCCTATAA
AAAAAATTTTTGGAAAAAACATCCTATTCTGTTTGTTTTTTTAAAAAA
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