DY262561

Overview
NameDY262561
Unique NameDY262561
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1356
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2326 contig Ccv1_Contig2326:1..1356. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_EMENI (Fumarylacetoacetase OS=Emericella nidulans GN=fahA PE=1 SV=3)

HSP 1 Score: 398.667 bits (1023), Expect = 4.283e-110
Identity = 209/370 (56.49%), Postives = 256/370 (69.19%), Query Frame = 2
Query:   14 SWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQIL---RAGNKTPDLAPCERLDLELEMGMFICRENTLGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIK--NDNELLPYLKQKVQEHVLGIDL*GGSYHCWGKQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSE---PGWLWAKSRETK 1099
            SWL IP  S FS+ANIPFG+IS+S  +S  PAIAIGD+ LDL  FA  GGF     IQ H++VF+Q  LNAFAALGRP HR VR Y+Q+VF+ ++    +L+DN  LQ  +LL  S+VTNHLP+ IGDYTDFYAG NHAYNVGVLFRGP NALQPNY HLPVAYHGRASSVV SGTP+ RP GQIL    A  K P  +PC++LD+ELE+  F+   N LG+PV +D+AE+HIFG VLMNDWSARDIQAWEYVPLGPF AKN  T+I+PWVVL DALE  +  G++  N   LLPYL++K  +    I L     +  G+   I+ +  K+  L    + L H  I GCNL T +    G +  K  +T+
Sbjct:    3 SWLQIPKNSPFSLANIPFGIISSSKLSSRVPAIAIGDYALDLSKFASSGGFSQLPVIQPHLNVFNQSTLNAFAALGRPVHRQVREYIQKVFSTETPFPQILRDNAALQKEALLPLSEVTNHLPMQIGDYTDFYAGLNHAYNVGVLFRGPDNALQPNYKHLPVAYHGRASSVVTSGTPLHRPQGQILTNPAANPKLPTFSPCKKLDIELELAFFVSTPNDLGHPVHIDKAEDHIFGVVLMNDWSARDIQAWEYVPLGPFNAKNFGTTITPWVVLIDALEPFRTVGLEPGNRESLLPYLREKRADTAYDIPLEVEVTNAGGEPTVISHSNAKN-LLYSFPQMLAHHTITGCNLNTGDLLGSGTISGKENQTE 371          
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_HUMAN (Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 6.669e-79
Identity = 171/385 (44.42%), Postives = 221/385 (57.40%), Query Frame = 2
Query:   11 MSWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQILRAGNKTPDLAPCERLDLELEMGMFICRENTLGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIKNDNELLPYL---KQKVQEHVLGIDL*GGSYHCWGKQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSEPGWLWAKS-----RETKFGPQREASWE-TKP 1138
            MS++ +   S F I N+P+GV ST  +  PR  +AIGD +LDL              + KH DVF+QP LN+F  LG+   +  R +LQ +    S   A L+D+ +L+  + + ++  T HLP TIGDYTDFY+ + HA NVG++FR   NAL PN+ HLPV YHGRASSVV SGTPIRRP GQ+    +K P    C+ LD+ELEM  F+   N LG P+P+ +A EHIFG VLMNDWSARDIQ WEYVPLGPF  K+  T++SPWVV  DAL     P  K D   LPYL   +    +  L ++L G       +  TI  +  K        ++L H  + GCNL+   PG L A           FG   E SW+ TKP
Sbjct:    1 MSFIPVAEDSDFPIHNLPYGVFSTRGDPRPRIGVAIGDQILDLSIIKH---LFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLL---SVSQARLRDDTELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMKPDDSKPPVYGACKLLDMELEMAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTVSPWVVPMDALMPFAVPNPKQDPRPLPYLCHDEPYTFDINLSVNLKGEG---MSQAATICKSNFK-YMYWTMLQQLTHHSVNGCNLR---PGDLLASGTISGPEPENFGSMLELSWKGTKP 372          
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_MOUSE (Fumarylacetoacetase OS=Mus musculus GN=Fah PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 1.258e-77
Identity = 170/382 (44.50%), Postives = 216/382 (56.54%), Query Frame = 2
Query:   11 MSWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQILRAGNKTPDLAPCERLDLELEMGMFICRENTLGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIKNDNELLPYLKQKVQEHVLGIDL*GGSYHCWG----KQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSEPGWLWAK-----SRETKFGPQREASWE 1129
            MS++ +   S F I N+P+GV ST SN  PR  +AIGD +LDL              + KH  VF +  LN F  LG+   +  R+ LQ +    S   A L+D+++L+  +   ++  T HLP TIGDYTDFY+ + HA NVG++FRG  NAL PN+ HLPV YHGRASS+V SGTPIRRP GQ+    +K P    C  LD+ELEM  F+   N  G P+P+ +A EHIFG VLMNDWSARDIQ WEYVPLGPF  K+  T+ISPWVV  DAL     P  K D + LPYL    Q +   I+L   S    G    +  TI  +  K        ++L H  + GCNL+   PG L A      S    FG   E SW+
Sbjct:    1 MSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKH---LFTGPALSKHQHVFDETTLNNFMGLGQAAWKEARASLQNLL---SASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHS-QPYTFDINL---SVSLKGEGMSQAATICRSNFKH-MYWTMLQQLTHHSVNGCNLR---PGDLLASGTISGSDPESFGSMLELSWK 368          
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_RAT (Fumarylacetoacetase OS=Rattus norvegicus GN=Fah PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 2.145e-77
Identity = 169/379 (44.59%), Postives = 216/379 (56.99%), Query Frame = 2
Query:   11 MSWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQILRAGNKTPDLAPCERLDLELEMGMFICRENTLGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIKNDNELLPYLKQKVQEHVLGIDL*GG-SYHCWGKQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSEPGWLWAK-----SRETKFGPQREASWE 1129
            MS++ +   S F I N+P+GV ST SN  PR  +AIGD +LDL              + KH  VF +  LN+F  LG+   +  R+ LQ +    S   A L+D+++L+  +   ++  T HLP TIGDYTDFY+   HA NVG++FRG  NAL PN+ HLPV YHGRASSVV SGTPIRRP GQ+    +K P     +RLD+ELEM  F+   N  G P+P+ +A+EHIFG VLMNDWSARDIQ WEYVPLGPF  K+  T+ISPWVV  DAL     P  K D + LPYL    Q +   I+L          +  TI  +  K        ++L H  + GCNL+   PG L A      S    FG   E SW+
Sbjct:    1 MSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKH---LFTGPVLSKHQHVFDETTLNSFMGLGQAAWKEARASLQNLL---SASQAQLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSLQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMRPDNSKPPVYGASKRLDMELEMAFFVGPGNRFGEPIPISKAQEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHS-QPYTFDINLSVALKGEGMSQAATICRSNFKH-MYWTILQQLTHHSVNGCNLR---PGDLLASGTISGSDPESFGSMLELSWK 368          
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_BOVIN (Fumarylacetoacetase OS=Bos taurus GN=FAH PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 2.372e-76
Identity = 168/379 (44.33%), Postives = 216/379 (56.99%), Query Frame = 2
Query:   11 MSWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQILRAGNKTPDLAPCERLDLELEMGMFICRENTLGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIKNDNELLPYLKQKVQEHVLGIDL*GG-SYHCWGKQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSEPGWLWAKS-----RETKFGPQREASWE 1129
            MS++ +   S F I N+P+GV ST  N  PR  +AIGD +LDL              +  H DVF++P LN+F  LG+   +  R++LQ +    S   A L+D+ +L+  +   ++  T +LP TIGDYTDFY+ ++HA NVGV+FRG  NAL PN+ HLPV YHGRASSVV SGTPIRRP GQ+    +K P    C+ LD ELEM  F+   N LG P+P+ +A EHIFG VLMNDWSARDIQ WEYVPLGPF  K+  T+ISPWVV  DAL        + D + LPYL    Q +   I+L          +  TI  +  K        ++L H  + GCNLQ   PG L A           FG   E SW+
Sbjct:    1 MSFVPVAEDSDFPIHNLPYGVFSTRGNPRPRIGVAIGDQILDLSVIKH---LFTGPILSGHQDVFNKPTLNSFMGLGQAAWKEARAFLQNLL---SASQARLRDDVELRQRAFTSQASATMYLPATIGDYTDFYSSRHHATNVGVMFRGKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPLGQMRPDDSKPPVYGACKLLDFELEMAFFVGPGNKLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVVPMDALMPFAVSNPEQDPKPLPYLCHD-QPYTFDINLSVALKGEGMSQAATICRSNFK-YMYWTMLQQLTHHSVNGCNLQ---PGDLLASGTISGPEPESFGCMLELSWK 368          
BLAST of DY262561 vs. ExPASy Swiss-Prot
Match: FAAA_DICDI (Fumarylacetoacetase OS=Dictyostelium discoideum GN=fah PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 4.790e-69
Identity = 151/384 (39.32%), Postives = 213/384 (55.47%), Query Frame = 2
Query:    2 AVTMSWLSIPSGSHFSIANIPFGVISTSSNASPRPAIAIGDHVLDLDAFARGGGFEASSDIQKHVDVFSQPALNAFAALGRPFHRAVRSYLQEVFAKDSKHAAVLKDNQKLQDASLLKRSDVTNHLPLTIGDYTDFYAGKNHAYNVGVLFRGPANALQPNYTHLPVAYHGRASSVVPSGTPIRRPWGQILR-AGNKTPDLAPCERLDLELEMGMFICRENT-LGNPVPVDEAEEHIFGYVLMNDWSARDIQAWEYVPLGPFTAKNLXTSISPWVVLADALEGAKGPGIKNDNELLPYLKQK---VQEHVLGIDL*GGSYHCWGKQKTINPNQLKDPPLGQGRKRLLHKPIPGCNLQTSE---PGWLWAKSRETKFGPQREASWE 1129
            ++  S++ +   SHF I N+P+GV   + N   R  +AIGD V DL   A    F+      K   VF Q  LN+F +LG+      R  +Q + + ++   + ++DN++ ++      S VT  LP  IGDYTDFYA K HA NVG++FRG  NAL PN+ HLPV YHGR+SS+V SGTP++RPWGQ      +  P   PC  LD ELEMG  I  E+T LG P+ ++ A++HIFG VL+NDWSARDIQ WEYVPLGPF AKN  ++ISPWVV  +AL+         D + + YL+++     +  L + +         K  T N   +         ++L H  + GCN+   +    G + +   E  +G   E SW+
Sbjct:    2 SILKSFIEVSEDSHFPIQNLPYGVFKPTLNDQARIGVAIGDFVCDLSVLADLKLFDGKL---KDTKVFHQENLNSFMSLGKELWSEARKTIQNLLSSET---STIRDNKEYREKIFHSISSVTMLLPARIGDYTDFYASKEHATNVGIMFRGKENALMPNWVHLPVGYHGRSSSIVVSGTPLKRPWGQTKSDEPDSLPTFNPCRLLDFELEMGALIGGESTKLGEPISIESAKDHIFGLVLLNDWSARDIQKWEYVPLGPFLAKNFGSTISPWVVTMEALQPFATKPPTQDPQPMKYLQEQGNTTFDIELSVSIKSPKMSKPHKVSTSNLKYM----YWTLTQQLAHHTVNGCNMNAGDLLGTGTI-SGPTEDSYGSMLELSWK 374          
The following BLAST results are available for this feature:
BLAST of DY262561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
FAAA_EMENI4.283e-11056.49Fumarylacetoacetase OS=Emericella nidulans GN=fahA... [more]
FAAA_HUMAN6.669e-7944.42Fumarylacetoacetase OS=Homo sapiens GN=FAH PE=1 SV... [more]
FAAA_MOUSE1.258e-7744.50Fumarylacetoacetase OS=Mus musculus GN=Fah PE=1 SV... [more]
FAAA_RAT2.145e-7744.59Fumarylacetoacetase OS=Rattus norvegicus GN=Fah PE... [more]
FAAA_BOVIN2.372e-7644.33Fumarylacetoacetase OS=Bos taurus GN=FAH PE=2 SV=1[more]
FAAA_DICDI4.790e-6939.32Fumarylacetoacetase OS=Dictyostelium discoideum GN... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100BC09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262561 ID=DY262561; Name=DY262561; organism=Citrus clementina; type=EST; length=1356bp
CGCCGTTACAATGTCGTGGCTATCGATTCCTTCGGGCTCTCACTTCTCAA
TCGCCAACATCCCCTTTGGCGTCATCTCCACTTCTTCAAACGCATCCCCC
AGGCCAGCCATTGCGATCGGTGATCATGTGCTAGATCTTGATGCTTTTGC
CCGCGGGGGAGGTTTCGAGGCCAGCTCGGACATTCAGAAGCACGTCGACG
TCTTCTCGCAACCCGCCCTCAATGCCTTTGCCGCCCTAGGCCGTCCGTTT
CATCGCGCTGTTCGCAGCTACCTGCAGGAGGTCTTTGCGAAGGACAGCAA
ACATGCTGCAGTTTTGAAGGACAACCAGAAGCTCCAAGATGCGTCTCTTT
TGAAGCGATCAGATGTGACGAACCATTTGCCGCTCACCATTGGTGATTAC
ACCGATTTCTACGCTGGCAAGAACCACGCCTACAATGTCGGCGTTCTCTT
CCGCGGACCTGCCAACGCTCTACAGCCGAACTATACGCATCTTCCCGTCG
CTTATCACGGAAGAGCCAGCAGCGTGGTTCCATCTGGTACACCAATTCGA
CGACCATGGGGTCAAATCCTTCGAGCCGGTAACAAGACCCCCGATCTCGC
CCCTTGCGAGAGGCTCGACCTTGAACTGGAGATGGGCATGTTCATCTGCC
GCGAGAACACACTCGGAAACCCTGTTCCTGTCGATGAGGCTGAAGAGCAC
ATCTTTGGTTACGTGCTCATGAATGACTGGAGTGCACGAGACATTCAGGC
CTGGGAGTATGTGCCGCTTGGCCCCTTTACCGCCAAGAACCTGNGTACGA
GCATCAGTCCTTGGGTTGTGTTGGCCGATGCTCTTGAGGGAGCCAAGGGA
CCTGGCATAAAGAACGATAACGAGCTTCTGCCTTACCTGAAGCAAAAGGT
GCAGGAACATGTGCTGGGCATTGATCTTTGAGGTGGATCTTATCACTGCT
GGGGGAAACAGAAGACAATTAACCCGAACCAACTCAAAGACCCTCCTCTG
GGTCAGGGCCGCAAAAGATTGCTTCACAAACCAATCCCGGGCTGCAACCT
CCAAACCAGTGAACCTGGTTGGCTCTGGGCCAAATCCCGGGAAACGAAGT
TCGGGCCCCAAAGGGAAGCATCTTGGGAAACAAAACCAAGGGAGGCAAGG
GTTCCTAATTCAACCTCAGCGGGGGGCAAAAAAAAACCAAGGTTTTTTGG
AAGAAAAGGCCAAACCCCTTGGGCCCTTTTCAAGAGTTTCTTTTGTGAAA
AAGGGGGTGAAATCTCCGGGTGGGGGAGAGAATATTGGCGCGAAGGGTAT
TTCGGGGGGGAGGGCGGTGTCTCACCCCCCCTCTCCGGTGTGCTCGTCTT
TGTGTG
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