DY262599

Overview
NameDY262599
Unique NameDY262599
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1003
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15142 contig Ccv1_Contig15142:56..1058. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 3.414e-55
Identity = 126/271 (46.49%), Postives = 145/271 (53.51%), Query Frame = 1
Query:   91 SDYAVLDSVRQHLLGEXXXXXXXXXXXXXXXN-----GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPT-----------VVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKRXXXXXXXXXXXXXXXXKRRRKVAALASVPVRAGMEMGSGVGKVARVASCTRGDQLLV 855
            SDYA L+S+R+HLLGE               +        P Y R+ SFS+LYPC T++WGDLPL+ENDSEDMLV+  L DA   GW P    ++ DR                    P            V  ++GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET              MRGSRALLNFPLR+NSGEP+PVRIKSKR                K+RR VA        AG  M  G+     V    RGD+LLV
Sbjct:    9 SDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKR----SSFSSSNENGAPKKRRTVA--------AGGGMDKGLTVKCEVVEVARGDRLLV 267          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.453e-45
Identity = 106/225 (47.11%), Postives = 129/225 (57.33%), Query Frame = 1
Query:  187 GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKRXXXXXXXXXXXXXXXXKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 858
            G  P Y R+SSFSRL PCLT+ WGDLPL+ +DSEDM+++  L+DAL VGW P    A   + +               APA  +   RG+HYRGVR+RPWGKFAAEIRDPAKNGARVWLGT+ET              MRGS+A LNFP RI   EPEPVR+ +KR                +RR+ VA   S  V   +E  S V +   +V   TR  QLLV+
Sbjct:   16 GEFPVYRRNSSFSRLIPCLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAEL--PRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASSSENSSPKRRRKAVATEKSEAVE--VESKSNVLQTGCQVELLTRRHQLLVS 236          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.076e-44
Identity = 89/167 (53.29%), Postives = 109/167 (65.27%), Query Frame = 1
Query:  196 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPS----RGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR 684
            P Y RSSSFS L PCLT++WGDLPL+ NDSEDM+++ FL+DA ++GW P    +E  + +                  PTV P+    +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+E+              MRG++ALLNFP RI   EPEPVR+  KR
Sbjct:   18 PVYCRSSSFSSLMPCLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPSNLTSEEVKLEPREEIEPAMST---SVSPPTVAPAALQPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKR 181          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.625e-44
Identity = 107/231 (46.32%), Postives = 130/231 (56.28%), Query Frame = 1
Query:  196 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAP------APTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR---XXXXXXXXXXXXXXXXKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 858
            P Y R+SSFS L PCLTD WGDLPL+ +DSEDM+++  L DALT GW P    +   + +               AP      A  VVP +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET              MRGS+ALLNFP RI   EPEPVR+  KR                   KRRRK  A+A+      ++  S V +V  ++     G+QLLV+
Sbjct:   10 PVYHRTSSFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTPFNLTSTEIKAEPREEIEPATSPVPSVAPPAETTTAQAVVP-KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKRRSPEPASSSISPASENSLPKRRRK--AVAAKQAELEVQSRSNVMQVGCQMEQFPVGEQLLVS 237          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.260e-41
Identity = 105/232 (45.26%), Postives = 128/232 (55.17%), Query Frame = 1
Query:  193 PPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAP------APTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR---XXXXXXXXXXXXXXXXKRRRKVAALASVPVRAGMEMGSGVGKV-ARVASCTRGDQLLVN 858
            PPT     SFS L PCLTD WGDLPL+ +DSEDM+++  L DALT GW P    +   + +               AP      A  VVP +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET              MRGS+ALLNFP RI   EPEPVR+ +KR                   KRRRK  A+A+      ++  S   +V  ++     G+QLLV+
Sbjct:   10 PPT-----SFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTPFNLTSTEIKAEPREEIEPATIPVPSVAPPAETTTAQAVVP-KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKRRSPEPASSSISSALENGSPKRRRK--AVAAKKAELEVQSRSNAMQVGCQMEQFPVGEQLLVS 233          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.819e-40
Identity = 111/264 (42.05%), Postives = 132/264 (50.00%), Query Frame = 1
Query:   91 SDYAVLDSVRQHLLGEXXXXXXXXXXXXXXXNGAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESD----RHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR----XXXXXXXXXXXXXXXXKRRRKVAALASVPVRAGMEMGSGVGKVARVASCTRGDQLLVN 858
            SDYA+L+S+ +HLLG                 G      R +  S    C T++WG LPL+ENDSEDMLV+  L+DA        +     D    + +             +  P  T    + KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET              MRGSRALLNFPLR+NSGEP+PVRI SKR                    KRRRK   L S  V+   E+G            TR D+LLV+
Sbjct:    9 SDYALLESITRHLLG-----------------GGGENELRLNE-STPSSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKKAIPV-TETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVGDE----------TRVDELLVS 243          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.823e-32
Identity = 77/161 (47.83%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  202 YFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR 684
            YFR+ SFS +   L DNW DLPL  +DS+DM ++N LRDA++ GW P      S   +              G+ AP     +G  YRGVR+RPWGKFAAEIRDP KNGARVWLGT+ET              +RGS+A LNFP  I S + EPVRI+ +R
Sbjct:   16 YFRNPSFSNVI--LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKAS-----GSHAPR---QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRR 166          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.019e-19
Identity = 57/130 (43.85%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  259 DLPLRENDSEDMLVFNFLRDA--LTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRI 642
            DLPL ENDS++M+++  L +A  L + ++PQ       R+Q                P   +    GK YRGVR+RPWGK+AAEIRD A++GARVWLGTFET              MRG++ALLNFP  I
Sbjct:    8 DLPLNENDSQEMVLYEVLNEANALNIPYLPQ-------RNQLLPRNNILR-------PLQCI----GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEI 119          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.147e-18
Identity = 42/78 (53.85%), Postives = 49/78 (62.82%), Query Frame = 1
Query:  424 PAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEP 657
            P P V     +HYRGVR RPWGKFAAEIRDP + G RVWLGTFET              +RGS+A+LNFPL ++   P
Sbjct:  125 PVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNP 202          
BLAST of DY262599 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  454 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPLRINSGEPEPVRIKSKR 684
            KHYRGVRQRPWGKFAAEIRDP K G+RVWLGTF+T              +RGS+A+LNFPL +   +P     + KR
Sbjct:  154 KHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKR 230          
The following BLAST results are available for this feature:
BLAST of DY262599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
EF100_ARATH3.414e-5546.49Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF1_TOBAC2.453e-4547.11Ethylene-responsive transcription factor 1 OS=Nico... [more]
ERF1_SOLLC2.076e-4453.29Ethylene-responsive transcription factor 1 OS=Sola... [more]
ERF2_NICSY4.625e-4446.32Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_TOBAC1.260e-4145.26Ethylene-responsive transcription factor 2 OS=Nico... [more]
EF101_ARATH1.819e-4042.05Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF99_ARATH1.823e-3247.83Ethylene-responsive transcription factor 13 OS=Ara... [more]
PTI5_SOLLC3.019e-1943.85Pathogenesis-related genes transcriptional activat... [more]
EF103_ARATH1.147e-1853.85Ethylene-responsive transcription factor 6 OS=Arab... [more]
EF102_ARATH4.359e-1855.84Ethylene-responsive transcription factor 5 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BF12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262599 ID=DY262599; Name=DY262599; organism=Citrus clementina; type=EST; length=1003bp
AAATATATACATAAACCAATTTCTGTTTTTAAATCCGGAAGCAAAATGCA
CGGACACAGTAGTAGTGGTGGTAGTATGAATATGATGCCGTCGGATTATG
CTGTGCTGGATTCAGTTCGCCAGCACTTACTCGGCGAATCGGAGACTGGA
CTGAGCAGCGTGTCATCAGCGAGTTCCAAGTCCAACGGGGCTCCCCCTAC
TTATTTCAGGAGCTCAAGCTTTAGCCGATTGTACCCATGTCTAACGGACA
ACTGGGGGGACCTCCCTTTGAGGGAGAACGACTCCGAGGACATGCTTGTC
TTTAATTTCTTGCGTGATGCCCTAACAGTTGGATGGGTTCCACAGGAGCA
GTTAGCCGAATCTGATCGCCATCAGGTGGCGGAAGTGGCGCCGGCACCGG
CGTTACCGGAGGAGCGAGGTGCTCCGGCTCCTACAGTGGTGCCTTCTAGG
GGGAAGCATTACAGGGGGGTTAGGCAGAGACCTTGGGGGAAGTTTGCGGC
CGAAATACGTGACCCGGCTAAGAATGGGGCTCGGGTTTGGCTCGGGACTT
TCGAGACGGCTGAGGATGCGGCTCTGGCTTATGACCGAGCCGCTTACAGG
ATGAGGGGATCAAGGGCTCTTTTGAATTTTCCCCTAAGGATCAACTCGGG
TGAGCCCGAGCCGGTCAGAATTAAGTCGAAGCGGTCCACGCCGGAGCCGT
CTTCGTCCACGGATAGTGGCAGTGTGTCCCCCAAGAGGAGGAGAAAGGTG
GCTGCCTTGGCGTCGGTGCCAGTACGAGCCGGGATGGAAATGGGAAGTGG
AGTTGGGAAAGTGGCGCGAGTGGCCTCCTGTACACGTGGTGACCAGCTAT
TGGTAAACTGACGCTGACGTGGAAGAAACTCCGAGTTCGATCTTATCCGA
GAGAATCTATAGTTCTTTTTCTCTTTTTCTGGGCCGGGGGGGTGATCATC
CCGCCCGTGATTTTGTAATTGGTAAGTTTGTTTGTACTTTTGAAGGTGGT
TTG
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