DY262616

Overview
NameDY262616
Unique NameDY262616
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1309
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13178 contig Ccv1_Contig13178:110..1418. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y5814_ORYSJ (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica GN=Os05g0481400 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.456e-31
Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 2
Query:  401 EPKSPAMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAND 748
            E +  A  +AE +Q++L+P+ PSF K+MVRSHV+SCFW+GLP  FCK HLP K+  +VLEDE G ++ + Y   +TGLS GWR F+  HNL +GD LVF+L  P + K+YII+A D
Sbjct:  116 EQQQRAFKKAERLQNSLDPENPSFVKTMVRSHVSSCFWLGLPTRFCKLHLPPKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFKIYIIKAVD 231          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y1341_ORYSJ (B3 domain-containing protein Os01g0234100 OS=Oryza sativa subsp. japonica GN=Os01g0234100 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.892e-29
Identity = 63/135 (46.67%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  416 AMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVDGALGLLNLDAPSKQNDTAE 820
            AM RA+E+Q+ L  + PSF K M+ SHV S FW+GLP  FC  +LP  DT +VLEDE+G  +   Y   K GLSAGWR F+  H++  GDV+VF+L++  K KV+IIR  + +  D A GL +  A  K+  + E
Sbjct:  134 AMKRAQEIQTKLPAEHPSFVKHMLHSHVVSGFWLGLPAGFCNKYLPKHDTDIVLEDENGNNHNTNYLGGKQGLSAGWRGFAINHDIKVGDVVVFELVSTTKFKVHIIRDKNISPTDRAPGLKSFYACKKRKISKE 268          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 7.386e-27
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 2
Query:  416 AMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAND 748
            A  RAE++QS+L+ ++ SF K M++SHV   FW+GLP  FCK+H+P +D  + L DE   +  AKY A+K GLS GWR F+  H LV+GD +VF LIA    KVYIIR ND
Sbjct:  112 AFDRAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVND 222          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y5828_ARATH (Putative B3 domain-containing protein At5g58280 OS=Arabidopsis thaliana GN=At5g58280 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.647e-27
Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  401 EPKSPAMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVDGALGLLNLDAPSKQNDTAE 820
            E K  A   AE+ Q +L+   P F KSMVRSHV SCFW+GLP  FC  + P++   + LEDE G  Y A Y   + GLS GW++F+  H L +GD L+F+L+ P K K+Y+ + N+   +  A        PS++ +  E
Sbjct:  104 EEKVGAFKAAEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGEVYEAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFKIYVFKGNENANLTSARKRGRATTPSEEEEEEE 243          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y3845_ORYSJ (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica GN=Os03g0184500 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.807e-26
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 2
Query:  398 VEPKSPAMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRA 742
            +E +  A  +AEE++S L+P+FPSF K M+ SHV   FW+GLP +FC+++LP  D  V L DE   Q+   Y A K GLS GW  F+  H L++GD  VFQL+ P   KV+IIRA
Sbjct:  113 MEARLEAARKAEELESQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYLAYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIRA 227          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y6944_ORYSJ (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica GN=Os06g0194400 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.053e-25
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 2
Query:  401 EPKSPAMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVD 763
            E +  A+  A+E++  L   +P F K M++SHV   FW+ LP +F + +LP +D ++ L DE   ++   Y A K GLS GWR FS AH LV+GD LVFQLI   K KVYIIRA+ + E D
Sbjct:  116 EQRDYAINAAQELEEELGSDYPIFVKPMLQSHVTGGFWLSLPTHFSRKYLPKRDETIRLVDEEDDEFDTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIRASSYYETD 236          
BLAST of DY262616 vs. ExPASy Swiss-Prot
Match: Y5270_ARATH (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana GN=At5g42700 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 4.481e-24
Identity = 57/119 (47.90%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  401 EPKSPAMIRAEEVQSNLEPQFPSFAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTE 757
            E +  A+ RA + Q  L   +PSF KSM++SHV+  FW+GLP  FCKSHL   D  + L DE G +Y   Y A K GLS GW  F+ AHNL  GD LVF+L+     KVYI R     E
Sbjct:   87 EIRDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGE 205          
The following BLAST results are available for this feature:
BLAST of DY262616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y5814_ORYSJ6.456e-3153.45B3 domain-containing protein Os05g0481400 OS=Oryza... [more]
Y1341_ORYSJ7.892e-2946.67B3 domain-containing protein Os01g0234100 OS=Oryza... [more]
Y3918_ARATH7.386e-2752.25B3 domain-containing protein At3g19184 OS=Arabidop... [more]
Y5828_ARATH9.647e-2740.71Putative B3 domain-containing protein At5g58280 OS... [more]
Y3845_ORYSJ2.807e-2648.70B3 domain-containing protein Os03g0184500 OS=Oryza... [more]
Y6944_ORYSJ4.053e-2546.28B3 domain-containing protein Os06g0194400 OS=Oryza... [more]
Y5270_ARATH4.481e-2447.90B3 domain-containing protein At5g42700 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100BH05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262616 ID=DY262616; Name=DY262616; organism=Citrus clementina; type=EST; length=1309bp
ATTTTGGGCTCGTCCATTGTTTCATCTCCATTGCTGAAAAATGGATCTGG
AACTGGAAGTCAAGAAAGAAGTGGTAGACGAGCACGTCAACACGACGTCG
CATCGCTCGGAAGCAGCAAGACCAACAGACGACGAAGAAGCTACAATCGC
GCAGCTCTCCCTGCTTCCCGCCTCTTCCAAGCCCAAGCGCAAGCGCAAAC
CTAAGACCATATTCTCCGCGGATGAGCCAATGAAGCCGTCGAAGAAGAAA
GGAAAGATTATATTAAAGCTGAAGAAGAGTCCACCTGACACATCGGTCAC
CTCCGTTCCGGGAACCGTTGAGCCTGATTCTAGAGGAGGAGGGAAGACTA
AGAGCTCTAAGAAAAATAAGGATGTGGTTGATGGGAAATGTTCTCCCGTT
GAACCCAAGTCTCCTGCTATGATTAGGGCAGAAGAGGTTCAATCCAATCT
AGAGCCTCAGTTCCCTAGTTTTGCCAAATCTATGGTTAGATCACATGTGG
CTAGCTGTTTCTGGATGGGGCTTCCTGGATACTTCTGTAAGTCACATTTA
CCAGATAAGGATACCTCTGTGGTTTTGGAAGATGAATCTGGAATCCAGTA
CACGGCAAAATATTTTGCTGAAAAGACGGGATTGAGTGCTGGTTGGAGAC
AATTTTCCACTGCACACAATTTGGTTGAGGGAGATGTTTTGGTCTTTCAG
TTAATTGCACCTCTAAAACTTAAGGTGTACATAATAAGGGCCAATGATTT
TACTGAGGTGGATGGGGCTCTTGGCCTTCTAAATTTGGATGCTCCTTCAA
AGCAAAATGATACAGCTGAACTTGAAATAGACTATGGAGAACCAATCGTA
GTGACTAATCAAAACACAAAGAAGAAACGCAAGAAGTCTCTACCATTAGC
AGTTGTCCAAAAGAAGAACAAAAAATCTGTCCAGGGAAGGTCAGCCCTCT
ATCTTGGGACACCAGCAAAGCAATCTGAAAATGACGGTGAAGAGGTTGGC
TCAAAAGTCCTGGAAGGTTCAAAATATCCACACCTTCCGGTCCGTTAAAA
GATGGTCCGAGTTTAAACAACTCAACATCCTGTTAAAGGGGCTGGTTGAA
AATTCGGACCTCCCTGAAAATATTCGGGGGAACTACCAAAAGCTTTTTCG
GGAATCCAAAAGCCTTCCCTCTCTGAAAACTTTGGACCGGGGGATAAATT
TTTAAGTTTAGATGGGGGGGAAATTTTTTTCTGAAAACTCGTCAAAATTT
TGGAAAGGAGGTGTGGGGGAAGCGTTGTGAGGGTTTTTTAAACAACTCCC
CCCGGGGGG
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