DY262620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.997e-50 Identity = 112/197 (56.85%), Postives = 126/197 (63.96%), Query Frame = 1 Query: 220 MSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPLQPLPCSL---------APELDDVSESAVNCTN---------------------NSPKDVITPPPKRKAVSDFQ---DDLHLGLKPCLPEK 711 MSCNGCRVLRKGCSENC+LR IQWI +P+AQ +ATVFVAKFFGRAGLMSFISAVPE+Q P+LFQSLLYEA GRTVNPV+GAVGLLWTGNWNVCQ+AVE VL GG L+P+P L +P D+ SE N S PPKRK +S Q +L L L P P K Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQQPSSELDLSLIPIYPIK 197
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.147e-48 Identity = 89/111 (80.18%), Postives = 101/111 (90.99%), Query Frame = 1 Query: 220 MSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPLQPLP 552 MSCNGCRVLRKGCSENC+LR IQWI T AQ +ATVFVAKFFGRAGLMSFISAVP++QRP+LFQSLLYEA GRTVNPV+GA+G+LWTGNWN+CQ+AVE VL GG L+P+P Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIP 111
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 4.191e-44 Identity = 83/110 (75.45%), Postives = 98/110 (89.09%), Query Frame = 1 Query: 220 MSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPLQPL 549 MSCNGCRVLRKGCSE C+LR +QWI + ++Q +ATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLL+EA GRTVNPV+GAVG+LWT NW+VCQ+AVE VL GG L+P+ Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI 110
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.811e-40 Identity = 72/117 (61.54%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 214 INMSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPLQPLPCSLA 564 + MSCNGCRVLRKGCSENC +R +QWI + ++QANATVF+AKF+GRAGLM+ ++ P+ RP++F+SLLYEA GR VNP+ G+VGLLW+GNW++CQ+AVE V+ G P+ P+ C A Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAA 117
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.999e-38 Identity = 71/117 (60.68%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 214 INMSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPLQPLPCSLA 564 + MSCNGCRVLRKGCSE+C +R + WI +P+AQANATVF+AKF+GRAGLM+ I+A P RP +F+SLL+EA GR VNP+ G+VGLLW+GNW +CQ AVE V+ G P++ + A Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAA 117
BLAST of DY262620 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.723e-35 Identity = 68/119 (57.14%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 214 INMSCNGCRVLRKGCSENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVLCGGPL--QPLPCSLA 564 + +SCNGCRVLRKGC+++C +R +QWI + +QANAT+F+AKF+GRAGL++ I + P+ RP++F+SLLYEA GR VNPV G+VGL+W+GNW CQ+AV+ VL G P+ PLP + A Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASA 119 The following BLAST results are available for this feature:
BLAST of DY262620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262620 ID=DY262620; Name=DY262620; organism=Citrus clementina; type=EST; length=1134bpback to top |