DY262621

Overview
NameDY262621
Unique NameDY262621
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: MYG1_MOUSE (UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 8.010e-63
Identity = 124/270 (45.93%), Postives = 170/270 (62.96%), Query Frame = 1
Query:  127 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSP 918
            R+GTHNG+FHCDEAL C ++RL  ++ NA+IVR+RDP+              Y+P + RYDHHQ+ F E       G  + TKLSSAGLVY HFG++L+A+ L   E    V  ++  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W +P+Q  E     F++ MDL  +EFL  + FY  SWLPAR++V E + +R+  D SGEI+ L K  CPWK HL+ LE E+  +  I +V+Y D  G QWRVQ V   P
Sbjct:   45 RIGTHNGTFHCDEALACALLRLLPEYANAEIVRTRDPEKLASCDIVVDVGGEYNPQSHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGRKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLNPTWNQPNQDTE---AGFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPKVAITFVIYTDQAG-QWRVQCVPKEP 309          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: MYG1_RAT (UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.366e-62
Identity = 138/319 (43.26%), Postives = 185/319 (57.99%), Query Frame = 1
Query:  127 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPIDSRAESFFQLIGRSERYE----LSKEPGYKFGLCHYNGFIVEIKLRKG 1053
            R+GTHNG+FHCDEAL C ++RL  ++ NA+IVR+RDP+              Y+P   RYDHHQ+ F E       G  + TKLSSAGLVY HFG +L+A+ L   E    V  ++  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W +PDQ  E     F++ MDL  +EFL  + FY  SWLPAR++V E + +R+  D SGEI+ L K  CPWK HL+ LE E+     I +V+Y D  G QWRVQ V   P   ++        R  R E    +S  PG  F   H +GFI     R+G
Sbjct:   46 RIGTHNGTFHCDEALACALLRLLPEYRNAEIVRTRDPEKLALCDIVVDVGGEYNPQRHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGHKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVSRLNPTWNQPDQDTE---AGFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPTVAITFVIYTDQAG-QWRVQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIF--VHASGFIGGHHTREG 357          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: MYG1_BOVIN (UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.784e-62
Identity = 137/319 (42.95%), Postives = 188/319 (58.93%), Query Frame = 1
Query:  127 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSP--IDSRAESFFQLIGRSERY--ELSKEPGYKFGLCHYNGFIVEIKLRKG 1053
            R+GTHNG+FHCDEAL C ++RL  ++  A+IVR+RDP+              YDP   RYDHHQ+ F E       G  + TKLSSAGL+Y HFG +L+A+ L   E    V  L+  +Y+NF+E +DA+DNGI+Q++ +  PRY+  T LS+RV +LN  W +P+Q  E     F++ MDL  +EFL  + FY  SWLPAR++V E + +R+  DPSGEI+ L K  CPWK HL++LE  +     I +V+Y D  G QWRVQ V   P    SR        G  +    ++S  PG  F   H +GFI   + R+G
Sbjct:   46 RIGTHNGTFHCDEALACALLRLLPEYREAEIVRTRDPEKLAACDIVVDVGGEYDPQRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDGMVGTLYDKMYENFVEEVDAVDNGISQWE-EGEPRYLLTTTLSARVARLNPTWNQPNQDTE---AGFKRAMDLVREEFLQRLDFYQNSWLPARTLVEEALAKRFQVDPSGEIIELEKGGCPWKEHLYQLELGLSPAGTIAFVIYTDQAG-QWRVQCVPKEPHSFQSRLPLLEPWRGLRDEALDQISGIPGCIF--VHASGFIGGHRTREG 357          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: MYG1_HUMAN (UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 5.192e-62
Identity = 137/319 (42.95%), Postives = 184/319 (57.68%), Query Frame = 1
Query:  127 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPIDSRAESFFQLIGRSERYE----LSKEPGYKFGLCHYNGFIVEIKLRKG 1053
            R+GTHNG+FHCDEAL C ++RL  ++ +A+IVR+RDP+              YDP   RYDHHQ+ F E       G  + TKLSSAGL+Y HFG +L+A+ L   E    V  L+  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W  PDQ  E     F++ MDL  +EFL  + FY  SWLPAR++V E + +R+  DPSGEI+ L K  CPWK HL+ LE  +     I +V+Y D  G QWR+Q V   P   ++        R  R E    +S  PG  F   H +GFI     R+G
Sbjct:   46 RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGPSEEDSMVGTLYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVARLNPTWNHPDQDTE---AGFKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIF--VHASGFIGGHPTREG 357          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: U160_DICDI (UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.414e-59
Identity = 125/313 (39.94%), Postives = 185/313 (59.11%), Query Frame = 1
Query:  136 THNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPIDSRAESFFQLIGRSERY------ELSKEPGYK-FGLCHYNGFIVEIKLRKG 1053
            TH+GSFH DEAL C++++L   + +++I+RSRD                Y+    R+DHHQ GF E F      KLSSAGL+YKH+GK+++ + L+ ++   ++  L+  +Y + ++ +D +DNG+ +Y +D  PRY + +++S+RVG LN  W EP Q  E  N+ F++ M+L G+ FLD + +Y +SWLP RSIV   +  R     SGEI++L  FCPWK HLF LE+E  I+  IK+VL+ED  G QWRV AV ++       SF   +   E +      ELS+  G +     H NGFI   K R+G
Sbjct:    8 THSGSFHADEALACYLLKLLPTYKDSKIIRSRDKSVIEKSTVAVDVGAVYNFEKLRFDHHQSGFTETFDDKHDIKLSSAGLIYKHYGKDIIKQRLDTNDSITEL--LYQKLYDSMIQELDGVDNGVERYPSDIKPRYQSGSSISARVGHLNQGWNEP-QDDEIVNKQFEKAMELMGQYFLDRLDYYGKSWLPCRSIVENALENRKQTHSSGEILILDMFCPWKDHLFSLEQEKDIKTPIKFVLFEDTSG-QWRVSAVGIN-----LHSFTLRLPLPEEWRGKRDEELSQISGIEGCVFAHANGFIGGNKTREG 311          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: YK4P_CAEEL (UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 9.484e-56
Identity = 127/323 (39.32%), Postives = 180/323 (55.73%), Query Frame = 1
Query:  130 VGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVFGH----GFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVLKR-FCPWKLHLFELEEEMKI-EPLIKYVLYEDDRGKQWRVQAVAVSPIDSRAESF-FQLIGRSER-YELSKEPGYKFGL-CHYNGFIVEIKLRKG-IGQAR 1068
            +GTH+G FHCDEA  CFM++   +F +  I+R+RD                +D S  RYDHHQ+GF +         F TKLSSAGLVY H+G+E++ + L  +     +   +  +Y+ F+E+IDAIDNGI+QY  D  PRY ++ NLSSR G+ N  W EP+  A+   E FQQ M   G+EF  +V++    W PAR I+   + +R++ D SG I++++   CPWK H F++E E  I +  I Y+L+ D     WRVQA+ V  + S           R  R  +LSKE G   G+  H +GFI     R+G I  AR
Sbjct:    5 IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYDHHQRGFTDTMRTLEKLNFDTKLSSAGLVYAHYGREVINQILGGNVSSSMIDLFYHRLYEQFVESIDAIDNGISQY--DGVPRYHSSGNLSSRTGQFNSHWNEPENDAD---ERFQQAMQFIGEEFSRSVKYLANVWWPAREIIEAAVDKRFEIDASGRIILIENGGCPWKEHFFDIEVEKNIADDNITYILFSDSTNASWRVQAIPVDKMSSFENRMPLPAAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREGAIAMAR 322          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: YEY6_YEAST (UPF0160 protein YER156C OS=Saccharomyces cerevisiae GN=YER156C PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.369e-54
Identity = 125/321 (38.94%), Postives = 186/321 (57.94%), Query Frame = 1
Query:  124 KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELVAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQY----DTDKPPRYVNNT-NLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPIDSRAESFFQLIGRSERYELSKEPGYKFGL-----CHYNGFIVEIKLRKGI 1056
            K++ TH+GSFH DE+L  +M+RL  +F +A++VRSR+PK              YD     +DHHQ+GF E F   + TKLSSAGL++KH+G++++   LN      D+  L+  VYK F+EA+DA DNGI++Y    D++  P + +N  ++   +  +N +W E D S E  +  F +  +  G  F+  VR Y +SWLPA+++V + I ER D D SG+I+VL +FCPWK HL+ELE E  IE  I++VL+ D  G  WRV  V   PI+S +  F + +    R    +E   K G+      H  GFI   K ++ +
Sbjct:   15 KQICTHSGSFHADESLAVYMLRLLPEFKDAKLVRSRNPKDWEASDILVDVGAQYDGVKF-FDHHQRGFFETFNEKYKTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDLLYDKVYKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNWNE-DTSDESFDRCFARASEFIGGVFVTLVRGYGQSWLPAKALVAQAIDERMDVDKSGKIIVLPQFCPWKEHLYELEREKNIEKQIEFVLFTDSSG-AWRVSTV---PINSTSFQFRRGLPEPLRGLRDEELSTKSGVPGCIFIHAAGFIGGAKSKEAV 329          
BLAST of DY262621 vs. ExPASy Swiss-Prot
Match: YIW4_SCHPO (UPF0160 protein C694.04c OS=Schizosaccharomyces pombe GN=SPAC694.04c PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 4.559e-50
Identity = 108/269 (40.15%), Postives = 155/269 (57.62%), Query Frame = 1
Query:  121 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDRYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEL---VAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVMECIGERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSP 918
            L ++ TH+G+FH DEAL  +M+R  D+F  AQIVRSRDP+              YD     +DHHQ+ F + F   +ST+LSSAGL+YKHFG+E+   V  +L ++E   D+  L+  VY++F+E +DA DNGI+ Y     P +    +L   V      W    Q  +   E FQ+  DL G  F+ +V  Y  SWLPA+++  E I +  D      I+++ +F PWK HLF++E+E+ IE   KY +Y D  GK WRVQAV++ P
Sbjct:    4 LVKIATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYDGIK-YFDHHQREFNDTFSPKYSTRLSSAGLIYKHFGREVIHAVLPQLKINE--QDLETLYEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQDDQTYLECFQKASDLMGTWFVRSVEHYALSWLPAKTLAREAILKAKD----SPILIVDQFFPWKGHLFDIEKELGIENQFKYAIYSD--GKAWRVQAVSIDP 263          
The following BLAST results are available for this feature:
BLAST of DY262621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MYG1_MOUSE8.010e-6345.93UPF0160 protein MYG1, mitochondrial OS=Mus musculu... [more]
MYG1_RAT1.366e-6243.26UPF0160 protein MYG1, mitochondrial OS=Rattus norv... [more]
MYG1_BOVIN1.784e-6242.95UPF0160 protein MYG1, mitochondrial OS=Bos taurus ... [more]
MYG1_HUMAN5.192e-6242.95UPF0160 protein MYG1, mitochondrial OS=Homo sapien... [more]
U160_DICDI1.414e-5939.94UPF0160 protein OS=Dictyostelium discoideum GN=DDB... [more]
YK4P_CAEEL9.484e-5639.32UPF0160 protein C27H6.8 OS=Caenorhabditis elegans ... [more]
YEY6_YEAST1.369e-5438.94UPF0160 protein YER156C OS=Saccharomyces cerevisia... [more]
YIW4_SCHPO4.559e-5040.15UPF0160 protein C694.04c OS=Schizosaccharomyces po... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100BH10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262621 ID=DY262621; Name=DY262621; organism=Citrus clementina; type=EST; length=1271bp
CAGAAGCTCTTCTTCTTCAGCGTGCACAAAAACCTCTTCAATCGCCCTAT
CATAGCCATGGCAGGCACCGGTGTTTCTTCTTCTCCTGCTTACTCCACTT
CATCCCCCAGCCAAACCCCTCTCAAGCGCGTGGGCACCCACAACGGCAGC
TTCCACTGCGACGAGGCGCTTGGTTGCTTCATGATTCGCCTCACTGACAA
GTTCTTCAACGCCCAGATAGTCCGCTCCCGCGACCCCAAGGTGTTGGATG
ATCTTGATGCGGTGCTTGATGTTGGAGGTGTGTATGATCCCAGTAATGAT
CGTTATGATCATCACCAGAAAGGTTTTGAAGAGGTTTTTGGACACGGGTT
CTCTACGAAACTTAGTAGTGCCGGTCTTGTTTATAAGCATTTTGGAAAGG
AGTTAGTAGCCAAGGAACTTAATGTTGATGAAGGGCATCCAGACGTGCAT
CGATTATTTTTGGCTGTTTACAAGAACTTCATGGAGGCAATCGATGCTAT
TGATAACGGAATCAATCAGTATGACACAGACAAGCCTCCAAGATATGTGA
ATAATACAAATTTGTCTTCTAGGGTGGGGAAACTAAATTTGGATTGGACG
GAACCTGATCAGTCAGCGGAGAGGGAGAATGAAGCCTTCCAACAAGGAAT
GGATCTGGCTGGCAAAGAGTTTCTGGACACTGTTCGATTTTATGTTAGAT
CATGGTTACCAGCACGATCAATTGTAATGGAATGTATTGGAGAAAGATAT
GATTATGATCCAAGTGGTGAAATTATGGTTCTGAAAAGATTTTGTCCTTG
GAAGCTTCACTTGTTTGAGCTTGAGGAGGAGATGAAGATTGAGCCTCTTA
TTAAATATGTTCTTTACGAGGACGACAGGGGCAAACAATGGCGGGTGCAG
GCTGTGGCAGTGTCCCCGATAGATTCGAGAGCCGAAAGCTTCTTCCAGCT
CATTGGCAGGTCTGAGAGATATGAACTCTCAAAAGAGCCGGGATACAAGT
TTGGGCTTTGTCATTATAATGGTTTCATTGTTGAAATAAAATTAAGGAAG
GGCATTGGCCAGGCTCGCCCTGCTTTTAAAGCTCAAACAAAAAAAAAAAG
AAAAAAATTCATTACCCGAATTAATAAACTTTCCCATTTTTATTCCAAAA
ATTTTTTGATTTTTTGCCGGCAATTTTGGGGTTTTTTTCCAAAAAAAAAA
AATTTTCCCAAAAAAAATTTTTCTTTCTCCCCCCCCGTTAAAATTTTTTT
CTCCCAAAAAAACCACCCCCC
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