DY262622

Overview
NameDY262622
Unique NameDY262622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1174
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262622_ssr437 microsatellite DY262622_ssr437:437..446. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPKA_ORYSJ (Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.339e-76
Identity = 148/185 (80.00%), Postives = 158/185 (85.41%), Query Frame = 2
Query:  467 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            MDR+A+TVGPGMDMPIMHD DRYELVRDIGSGNFGVARLMR +   +LVAVKYIERGDKIDENVQREIINHRSLRHPNI+RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF QLISGVS+CHSMQVCHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:    1 MDRAALTVGPGMDMPIMHDGDRYELVRDIGSGNFGVARLMRSRADGQLVAVKYIERGDKIDENVQREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 183          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPK8_ORYSJ (Serine/threonine-protein kinase SAPK8 OS=Oryza sativa subsp. japonica GN=SAPK8 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.832e-74
Identity = 145/186 (77.96%), Postives = 159/186 (85.48%), Query Frame = 2
Query:  464 AMDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            A DR+A+TVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRD++T ELVAVKYIERG+KID+NVQREIINHRSL+HPNI+RFKEVILTPTHLAIVMEYASGGELFERIC   RFSEDEAR+FF QLISGVS+CHSMQVCHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:   10 APDRAALTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDRRTMELVAVKYIERGEKIDDNVQREIINHRSLKHPNIIRFKEVILTPTHLAIVMEYASGGELFERICKNVRFSEDEARYFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 193          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SRK2I_ARATH (Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana GN=SRK2I PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.551e-73
Identity = 143/185 (77.30%), Postives = 158/185 (85.41%), Query Frame = 2
Query:  467 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            MDR+ +T GP +DMPIMHDSDRY+ V+DIGSGNFGVARLMRDK T+ELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI+MEYASGGEL+ERICNAGRFSEDEARFFF QL+SGVS+CHSMQ+CHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:    1 MDRAPVTTGP-LDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 182          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SRK2E_ARATH (Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana GN=SRK2E PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 3.820e-72
Identity = 145/185 (78.38%), Postives = 159/185 (85.95%), Query Frame = 2
Query:  467 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            MDR A++ GP MD+PIMHDSDRYELV+DIGSGNFGVARLMRDK++ ELVAVKYIERG+KIDENV+REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF QLISGVS+CH+MQVCHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:    1 MDRPAVS-GP-MDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 181          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 3.027e-69
Identity = 139/186 (74.73%), Postives = 157/186 (84.41%), Query Frame = 2
Query:  467 MDRSAMTVGP-GMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            M+R+A   GP GM+MPIMHD DRYELV++IGSGNFGVARLMR++ + +LVAVKYI+RG+KIDENVQREIINHRSLRHPNI+RFKEVILTPTHLAIVMEYASGGELFERIC+AGRFSEDEARFFF QLISGVS+CHSMQVCHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:    1 MERAA--AGPLGMEMPIMHDGDRYELVKEIGSGNFGVARLMRNRASGDLVAVKYIDRGEKIDENVQREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 182          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SRK2D_ARATH (Serine/threonine-protein kinase SRK2D OS=Arabidopsis thaliana GN=SRK2D PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 4.371e-68
Identity = 132/174 (75.86%), Postives = 149/174 (85.63%), Query Frame = 2
Query:  500 MDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            +D+PIMHDSDRY+ V+DIGSGNFGVARLM D+ T+ELVAVKYIERG+KIDENVQREIINHRSLRHPNIVRFKEVILTP+HLAIVMEYA+GGEL+ERICNAGRFSEDEARFFF QLISGVS+CH+MQ+CHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:   12 IDLPIMHDSDRYDFVKDIGSGNFGVARLMTDRVTKELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPSHLAIVMEYAAGGELYERICNAGRFSEDEARFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 183          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSI (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 7.984e-62
Identity = 120/165 (72.73%), Postives = 141/165 (85.45%), Query Frame = 2
Query:  527 DRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWE---IHYWMGVQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            +RYE+++DIGSGNFGVA+L+RD +T+EL AVK+IERG KIDENVQREI+NHRSLRHPNIVRFKEV+LTPTHLAIVMEYA+GGELFERIC+AGRFSEDEARFFF QLISGVS+CHSMQ+CHRDLK E   +   +  +L +  F    + +L   SQPKSTVGTPA
Sbjct:    2 ERYEVIKDIGSGNFGVAKLVRDVRTKELFAVKFIERGQKIDENVQREIMNHRSLRHPNIVRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSVLH--SQPKSTVGTPA 164          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSJ (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.043e-61
Identity = 120/165 (72.73%), Postives = 141/165 (85.45%), Query Frame = 2
Query:  527 DRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWE---IHYWMGVQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            +RYE+++DIGSGNFGVA+L+RD +T+EL AVK+IERG KIDENVQREI+NHRSLRHPNIVRFKEV+LTPTHLAIVMEYA+GGELFERIC+AGRFSEDEARFFF QLISGVS+CHSMQ+CHRDLK E   +   +  +L +  F    + +L   SQPKSTVGTPA
Sbjct:    2 ERYEVIKDIGSGNFGVAKLVRDVRTKELFAVKFIERGQKIDENVQREIMNHRSLRHPNIVRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSLLH--SQPKSTVGTPA 164          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 5.722e-60
Identity = 120/165 (72.73%), Postives = 137/165 (83.03%), Query Frame = 2
Query:  527 DRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            +RYE++RDIGSGNFGVA+L+RD  T  L AVK+IERG KIDE+VQREI+NHRSL+HPNI+RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFF QLISGVS+CHSMQVCHRDLK E     G    +L +  F    + +L   SQPKSTVGTPA
Sbjct:    2 ERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVTPRLKICDFGYSKSSVLH--SQPKSTVGTPA 164          
BLAST of DY262622 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.473e-60
Identity = 118/165 (71.52%), Postives = 137/165 (83.03%), Query Frame = 2
Query:  527 DRYELVRDIGSGNFGVARLMRDKKTEELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFHQLISGVSFCHSMQVCHRDLKWEIHYWMG---VQLLV*RFVILDTLILRTTSQPKSTVGTPA 1012
            D+YELV+DIG+GNFGVARLMR K ++ELVA+KYIERG KIDENV REIINHRSLRHPNI+RFKEV+LTPTH+AI MEYA+GGELFERIC+AGRFSEDEAR+FF QLISGVS+CH+MQ+CHRDLK E     G    +L +  F    + +L   S PKSTVGTPA
Sbjct:    2 DKYELVKDIGAGNFGVARLMRVKNSKELVAMKYIERGPKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHIAIAMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLH--SMPKSTVGTPA 164          
The following BLAST results are available for this feature:
BLAST of DY262622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SAPKA_ORYSJ3.339e-7680.00Serine/threonine-protein kinase SAPK10 OS=Oryza sa... [more]
SAPK8_ORYSJ1.832e-7477.96Serine/threonine-protein kinase SAPK8 OS=Oryza sat... [more]
SRK2I_ARATH1.551e-7377.30Serine/threonine-protein kinase SRK2I OS=Arabidops... [more]
SRK2E_ARATH3.820e-7278.38Serine/threonine-protein kinase SRK2E OS=Arabidops... [more]
SAPK9_ORYSJ3.027e-6974.73Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
SRK2D_ARATH4.371e-6875.86Serine/threonine-protein kinase SRK2D OS=Arabidops... [more]
SAPK2_ORYSI7.984e-6272.73Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK2_ORYSJ1.043e-6172.73Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK1_ORYSJ5.722e-6072.73Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
SRK2B_ARATH7.473e-6071.52Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BH11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262622 ID=DY262622; Name=DY262622; organism=Citrus clementina; type=EST; length=1174bp
CTTCCTCCCAAAGGTTTTCGGATAAAACGCAGAGTAAAAAATAAAAAAGA
AAGCCATAAAGAGAAGGAACAAAAACAAACCGTGTCTCGGTGTCCGTACA
GTTCTAGAGGGTGACAGAGTGAGACTTGAACGTCTCAGTTTCGTAATCAC
GACTTCACGAGCTTCTTTCTTCGTTCTAACAGTCCCTCAACCAGAAAAAA
AAAAATATTCAAAGAGAAAACTCAGTTGGACAGGTGAACTTTTCACGGGC
AAAGTCCCATCATCAGTCTCCTTTATCAACCCACCACAATCCAACCGTCC
ATACTTCGCCACGTTATCACCGCCACCGTCGCCCTGATCGCGATCGTGCT
CTTCTTTGTTCCCATCATATGATAATGTGACTGTTTGGAGTATTTTAATT
TCTTTTATATTTTTTTGGTTGCTTGTTTTGATTTACATATATATATACGC
ACGCATATAGAGTGCAATGGATCGATCCGCGATGACGGTGGGTCCCGGCA
TGGACATGCCGATCATGCACGATAGCGATCGGTATGAGCTCGTTCGGGAT
ATTGGGTCGGGGAATTTTGGGGTGGCCAGGTTGATGAGAGATAAAAAAAC
TGAGGAGCTTGTTGCTGTTAAGTATATCGAGCGAGGTGATAAGATTGATG
AAAATGTGCAAAGAGAAATTATCAACCACAGGTCATTAAGGCATCCCAAC
ATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTATTGT
GATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATGCAG
GGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCATCAACTTATTTCT
GGAGTGAGCTTCTGCCATTCAATGCAAGTATGCCACCGCGACTTGAAATG
GGAAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTTGTGA
TTTTGGATACTCTAATTCTTCGTACTACTTCCCAGCCAAAATCCACTGTT
GGTACTCCTGCAAATATGCCCCTGAAGGGTTGCTTAGAAAGAAAATGATG
CAAAGATGCAAATGTATGTTCTGGTGGGTGACTTTATTGTTTTGTTGGGG
GAAACAATCCCTTTTAAGGACCCGAAAAACCAAAAAATTTCCCCAAAAAA
AAAATCTAATTCTAAGTTTTCAGA
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