DY262634

Overview
NameDY262634
Unique NameDY262634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1313
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262634 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.110e-14
Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  564 YDAIRWDSVKLEHPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQL-GNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDR-RNGNENNADAQSKAAGATVRKKQTDFPGRKGTA*G*LCRGLLNFFD-----ELRVRFGVTKRI 1100
            Y ++  D  +  HP       ++ ++      I++D+ +F+   ++Y   G  ++RGYLLYGPPGTGKSS + A+A  L+  +  L L G    D+ L  LL +   RSI+++EDID ++   +   +   N+A+A S ++G    +     P            GLLN  D     E R+ F  T  +
Sbjct:  187 YTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAASEGRILFMTTNHL 375          
BLAST of DY262634 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.217e-14
Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  609 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSV----DLPDRRNGNENN 947
            +  ++ +  DLK+ ++ED+  F+  + +Y+  G  ++RGYLLYG PG GKSSL+ A+A  L  D+  + L +    D  +  LL +   +SIL+IEDID +     D  D  N N NN
Sbjct:  185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNNNSNN 302          
BLAST of DY262634 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae GN=BCS1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.558e-11
Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  618 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLG-NVTRDSDLRTLLLSTGNRSILVIEDIDCS 908
            ++ ++  +K  I++D+  F++  ++Y   G  ++RGYLLYGPPG+GK+S + A+A  L +++  L L  N   D  L  L+ +   RSIL++EDID +
Sbjct:  227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAA 324          
BLAST of DY262634 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe GN=SPAC644.07 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.341e-11
Identity = 36/105 (34.29%), Postives = 63/105 (60.00%), Query Frame = 3
Query:  600 HPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDID 902
            HP +     ++ +E ++K  I +D+  F+R  ++Y   G  ++RGYLLYGPPG+GK+S + A+A  L +D+  L L      D  L  LL +   ++++++ED+D
Sbjct:  200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVD 304          
BLAST of DY262634 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.444e-11
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 3
Query:  618 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 908
            ++ +E  +   I++D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L++ +  + L + +   D    LLS    +SI+++ED+D +
Sbjct:  190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAA 287          
The following BLAST results are available for this feature:
BLAST of DY262634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BCS1B_DICDI1.110e-1429.63Probable mitochondrial chaperone BCS1-B OS=Dictyos... [more]
BCS1A_DICDI4.217e-1437.29Probable mitochondrial chaperone BCS1-A OS=Dictyos... [more]
BCS1_YEAST2.558e-1136.73Mitochondrial chaperone BCS1 OS=Saccharomyces cere... [more]
BCS1_SCHPO3.341e-1134.29Probable mitochondrial chaperone bcs1 OS=Schizosac... [more]
BCS1_XENLA7.444e-1133.67Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100CB01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262634 ID=DY262634; Name=DY262634; organism=Citrus clementina; type=EST; length=1313bp
AAAACATCCCTTCGGCTTCAACACTGTTTGCCACCTATGCCTCCATGACT
GCTTCACTCATGCTGTTTCGGTCAATGGCAAACGATTTTTTACCCGAACC
AGTTCGAAATTATGCTTGTTTTGCCTTCCGATATTTCTTCAAGCCTCGCT
CAAAAGAATTGACGCTTGTGATCGAAGATTCTAATGGTATTGCCCGCAAC
CAAATTTTTGAGGCTGCTGAGGTTTACTTGAGCGCTAAGATCGGTCCCAG
CATCGAAAGGCTCAAAATATGCAAAACTCCAAATGAAAAAGTCATCACAA
TCCGCCTGGAAAAGAACGAACAGATTATTGATTCTTTCCGAGGGGTACAG
CTCAGATGGAGGTTTGCTCTTGTGGAGGCAGCCGACGGAAAGGGTAATTC
CCATTCTATGAGGCCTGAGAAGCGACTATTTGAGCTTACATTTCACCAGA
CTCACAAAGACATGGTCTTGAACTCTTACCTGCCACATGTAATCGAGCTA
GCAAAGGATATGAAAGATAAGACAAGGGTTTTGAAGATGTACACACTCCA
TAGGGTTCCAGATTATGATGCGATCCGGTGGGATTCGGTCAAACTTGAGC
ATCCAGCAACCTTTGACACTTTGGCCATGGAACCAGATCTTAAAGCTACT
ATCATGGAGGATCTCGATAGGTTTGTTAGGAGGAAGGAGTTTTACAAGAG
AGTTGGCAGAGCATGGAAACGTGGGTACTTGCTGTACGGACCTCCAGGCA
CTGGCAAATCAAGCTTGGTTGCAGCCATGGCCAACTATCTCAAGTTTGAT
GTCTTTGATTTGCAGCTCGGAAATGTTACCCGTGACTCCGATCTAAGGAC
TCTCCTGCTCAGTACTGGGAATAGATCAATCCTTGTCATCGAAGACATTG
ATTGCAGTGTCGACCTGCCTGATCGCCGAAATGGAAATGAAAATAATGCT
GATGCTCAGTCCAAGGCCGCGGGCGCAACTGTCCGCAAAAAACAGACCGA
CTTCCCTGGCCGAAAAGGGACAGCATAAGGTTGACTTTGTCGGGGCTTGC
TAAACTTCTTTGATGAACTAAGGGTCCGGTTTGGGGTGACCAAAAGGATT
AACCTAAATTCACAACCAACCCCAAGGGAAAAGGCGGGGTTCCTGGCCTT
TTGGGGCCTTCCAGAAACCCAGGGGAAAATGCCCCTTTTCCACGTTTCAA
AATTTTGGGCCCCCCTTTGGGGGGTTTTCGGGGGTGGTTTTCTTTCCGCG
CAATATATTTTTTGTGGGGGCCTTTTACCCACGGGGGGGGGGGGAAACAA
CAAAACAAAAACT
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