DY262647 | Citrus Genome Database

Overview


Name	DY262647
Unique Name	DY262647
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1323

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: XCT_ORYSJ (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica GN=XCT PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 2.538e-89
Identity = 173/275 (62.91%), Postives = 183/275 (66.55%), Query Frame = 2

Query:   53 MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAF 877
            MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK KS    GQPGLLQFGSSTSEILETAFKKETVGLVTRE+YVEKRVNIR                                G+ RLSF D+               + K     KLGKDPTVETSFLPD                        I+NEPL ITYSYWDG GHRRVIQVRKGD+IGEFLRAVQQQLAPEFRE+RTTSV NLLYVKEDLIIPHQHSFYELI+NKARGK    F
Sbjct:    1 MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNKS--SDGQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLF 272

HSP 2 Score: 41.2022 bits (95), Expect = 2.538e-89
Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 1

Query:  949 GKVVERHWYEKTSISSLLSMGD-YDPTRKWKRSPFPG 1056
            GKVVERHWYEK       S  + YDPT+KW+R    G
Sbjct:  296 GKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHG 332

HSP 3 Score: 79.337 bits (194), Expect = 5.560e-14
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F  L++ K  GKSGPLFHFDVHEDVRTIADAT EKDESHAG+        K++HIFPA
Sbjct:  256 FYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVERHWYEKNKHIFPA 313

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: XCT_ORYSI (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica GN=XCT PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 2.538e-89
Identity = 173/275 (62.91%), Postives = 183/275 (66.55%), Query Frame = 2

Query:   53 MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAF 877
            MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK KS    GQPGLLQFGSSTSEILETAFKKETVGLVTRE+YVEKRVNIR                                G+ RLSF D+               + K     KLGKDPTVETSFLPD                        I+NEPL ITYSYWDG GHRRVIQVRKGD+IGEFLRAVQQQLAPEFRE+RTTSV NLLYVKEDLIIPHQHSFYELI+NKARGK    F
Sbjct:    1 MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNKS--SDGQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLF 272

HSP 2 Score: 41.2022 bits (95), Expect = 2.538e-89
Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 1

Query:  949 GKVVERHWYEKTSISSLLSMGD-YDPTRKWKRSPFPG 1056
            GKVVERHWYEK       S  + YDPT+KW+R    G
Sbjct:  296 GKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHG 332

HSP 3 Score: 79.337 bits (194), Expect = 5.560e-14
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F  L++ K  GKSGPLFHFDVHEDVRTIADAT EKDESHAG+        K++HIFPA
Sbjct:  256 FYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVERHWYEKNKHIFPA 313

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: XCT_ARATH (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana GN=XCT PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 7.348e-89
Identity = 171/276 (61.96%), Postives = 185/276 (67.03%), Query Frame = 2

Query:   53 MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAF 877
            MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+KS S   Q GLLQFG+S+ EIL+TAFKKETVGLVTREEYVEKRVNIRN                                G+SRLSFA+DF               T  L   KLGKDP+VET+FLPD                        I+NEPL+ITYSYWDG GHRRVIQVRKGD IG FLRAVQQQLAP+FREIRT SV NLLYVKEDLIIPHQHSFYELI+NKARGK    F
Sbjct:    1 MSGMGDGYVGTAQDAVRIRRLQKQREAERKKIQELKSKSASGNDQSGLLQFGTSSCEILDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLF 276

HSP 2 Score: 40.817 bits (94), Expect = 7.348e-89
Identity = 19/32 (59.38%), Postives = 22/32 (68.75%), Query Frame = 1

Query:  949 GKVVERHWYEKTSISSLLSMGD-YDPTRKWKR 1041
            GKVVERHWYEK       S  + YDPT+KW+R
Sbjct:  300 GKVVERHWYEKNKHIFPASRWEIYDPTKKWER 331

HSP 3 Score: 82.0333 bits (201), Expect = 8.578e-15
Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F  L++ K  GKSGPLFHFDVHEDVRTIADATIEKDESHAG+        K++HIFPA
Sbjct:  260 FYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPA 317

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: FA50B_MOUSE (Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.687e-31
Identity = 84/273 (30.77%), Postives = 122/273 (44.69%), Query Frame = 2

Query:   74 YVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSDKGQPGLLQFGSSTS-EILETAFKKETVGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGN--SRLSFADDFXXXXXXXXXXXXXLKTKRL-AQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            Y GT ++A R   L K+RE ++ +++ LK +   +      +    S   + +E   K  TVGLVT  +   K+  +                                     S LSF  D               +     A+  LGK+P V+TSFLPD                        ++ E ++IT+SYWDG+GHRR +++ KG T+ +FL+   Q L  +FRE+R   V  L+YVKEDLI+PH H+FY+ IV KARGK    FS
Sbjct:    4 YKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIMKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALLREREMQLAKREQLEQRRIQLEMLREKERRRERKRKISNLSFTLDEEEGDQEDSRQAESAEAHSAGAKKNLGKNPDVDTSFLPDREREEEENRLREELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMSKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFS 276

HSP 2 Score: 31.5722 bits (70), Expect = 3.687e-31
Identity = 16/32 (50.00%), Postives = 17/32 (53.12%), Query Frame = 1

Query:  949 GKVVERHWYEKTS-ISSLLSMGDYDPTRKWKR 1041
            GKVV R WYEK   I        YDP +KW R
Sbjct:  299 GKVVLRSWYEKNKHIFPASRWEPYDPEKKWDR 330

HSP 3 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++ K  GKSGPLF FDVH+DVR ++DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  259 FYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPA 316

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: F50AA_XENLA (Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.507e-27
Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 2

Query:  482 KRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            K+  + KLGK+P V+TSFLPD                        I++E ++IT+SYWDG+GHRR ++++KG++I +FL+   + L  +F E+R+  V  L+Y+KEDLIIPH HSFY+ IV KARGK    F+
Sbjct:  150 KKKKKKKLGKNPDVDTSFLPDRDREEEENRLREELRQEWEHKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQKALESLRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFN 282

HSP 2 Score: 75.0998 bits (183), Expect = 1.049e-12
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++TK  GKSGPLF+FDVHEDVR ++DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  265 FYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPA 322

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: FA50B_HUMAN (Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.571e-27
Identity = 87/286 (30.42%), Postives = 132/286 (46.15%), Query Frame = 2

Query:   74 YVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSD---KGQPGLLQFGSSTSEILETAFKKETVGLVT--------------REEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            Y GT ++A R   L K+RE +R +++ LK +   +   K Q    +  S+  + +E   K  TVGLVT              RE  + KR ++                                   S LSFA D               + +R     LGK+P V+TSFLPD                        +++E +++T+SYWDG+GHRR ++VRKG+T+ +FL+   Q L  +F E+R+  V  L+++KEDLI+PH H+FY+ I+ +ARGK    FS
Sbjct:    4 YKGTMREAGRAMHLLKKRERQREQMEVLKQRIAEETILKSQVD--KRFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVRERERQLAKRQHLEEQRLQQERQREQEQRRERKRKI------------SCLSFALD------DLDDQADAAEARRAGN--LGKNPDVDTSFLPDRDREEEENRLREELRQEWEAQREKVKDEEMEVTFSYWDGSGHRRTVRVRKGNTVQQFLKKALQGLRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFS 267

HSP 2 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++ +  GKSGPLF FDVH+DVR ++DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  250 FYDFIIARARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPA 307

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: FA50A_HUMAN (Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.357e-27
Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = 2

Query:  500 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            KLGK+P V+TSFLPD                        I++E ++IT+SYWDG+GHRR +++RKG+T+ +FL+   + L  +F E+R+  V  L+Y+KEDLIIPH HSFY+ IV KARGK    F+
Sbjct:  155 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMRKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFN 281

HSP 2 Score: 73.9442 bits (180), Expect = 2.336e-12
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++TK  GKSGPLF+FDVH+DVR ++DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  264 FYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPA 321

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: F50AB_XENLA (Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.357e-27
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 2

Query:  476 KTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            K K+  + +LGK+P V+TSFLPD                        I++E ++IT+SYWDG+GHRR ++++KG++I +FL+   + L  +F E+R+  V  L+Y+KEDLIIPH HSFY+ IV KARGK    F+
Sbjct:  151 KKKKKKKQQLGKNPDVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFN 285

HSP 2 Score: 73.559 bits (179), Expect = 3.051e-12
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++TK  GKSGPLF+FDVHEDVR ++DA++EKDESHAG+    +   K++HIFPA
Sbjct:  268 FYDFIVTKARGKSGPLFNFDVHEDVRLLSDASVEKDESHAGKVVLRSWYEKNKHIFPA 325

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: FA50A_DANRE (Protein FAM50A OS=Danio rerio GN=fam50a PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.385e-27
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 2

Query:  500 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            KLGK+P V+TSFLPD                        I++E ++IT+SYWDG+GHR+ ++++KG+TI +FL+   + L  +F E+R+  V +L+Y+KEDLIIPH HSFY+ IV KARGK    F+
Sbjct:  157 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRKTVKMKKGNTIQQFLQRALEVLRKDFSELRSAGVEHLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFN 283

HSP 2 Score: 72.7886 bits (177), Expect = 5.204e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++TK  GKSGPLF+FDVH+D+R + DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  266 FYDFIVTKARGKSGPLFNFDVHDDIRLVNDATVEKDESHAGKVVLRSWYEKNKHIFPA 323

[Close]

BLAST of DY262647 vs. ExPASy Swiss-Prot
Match: FA50A_MOUSE (Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 7.480e-27
Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 2

Query:  500 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTSVGNLLYVKEDLIIPHQHSFYELIVNKARGKKWTAFS 880
            KLGK+P V+TSFLPD                        I++E ++IT+SYWDG+GHRR ++++KG+T+ +FL+   + L  +F E+R+  V  L+Y+KEDLIIPH HSFY+ IV KARGK    F+
Sbjct:  155 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFN 281

HSP 2 Score: 73.9442 bits (180), Expect = 2.336e-12
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  828 FMSLLLTKPGGKSGPLFHFDVHEDVRTIADATIEKDESHAGESGGEALV*KDQHIFPA 1001
            F   ++TK  GKSGPLF+FDVH+DVR ++DAT+EKDESHAG+    +   K++HIFPA
Sbjct:  264 FYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPA 321

The following BLAST results are available for this feature:

BLAST of DY262647 vs. ExPASy Swiss-Prot

BLAST of DY262647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20


Match Name	E-value	Identity	Description
XCT_ORYSJ	2.538e-89	62.91	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ...	[more]
XCT_ORYSI	2.538e-89	62.91	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ...	[more]
XCT_ARATH	7.348e-89	61.96	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis t...	[more]
FA50B_MOUSE	3.687e-31	30.77	Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1	[more]
F50AA_XENLA	1.507e-27	43.61	Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=...	[more]
FA50B_HUMAN	2.571e-27	30.42	Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1	[more]
FA50A_HUMAN	3.357e-27	45.67	Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2	[more]
F50AB_XENLA	3.357e-27	42.96	Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=...	[more]
FA50A_DANRE	4.385e-27	44.88	Protein FAM50A OS=Danio rerio GN=fam50a PE=2 SV=1	[more]
FA50A_MOUSE	7.480e-27	44.88	Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA100CC02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262647 ID=DY262647; Name=DY262647; organism=Citrus clementina; type=EST; length=1323bp
AGAAATCGAGAAAGGCAGAACTGCTACCGAGAGAAACACACAGCATATCA
AGATGTCGGGTATGGGAGATGGGTACGTGGGCACGGCCCAAGACGCGGTG
AGGATCCGGAGACTCGAGAAGCAAAGAGAAGCCGAGCGTCGCAAAATCCA
AGAGCTCAAAACGAAGTCCGTCTCCGACAAGGGCCAGCCCGGTCTCCTCC
AGTTTGGTTCAAGTACCTCCGAGATTCTAGAAACTGCGTTTAAGAAGGAA
ACCGTAGGTTTAGTCACCAGAGAGGAATACGTTGAGAAGAGGGTTAATAT
TCGGAACAAGATTGAAGAGGAAGAAAAGGAGAAGCTTCAGAAGCTACTAC
AAGAGGAAGAGGAGCTGCAATTGGAAAAGCGTAAAAAGCGAAAGATTAAG
GGAAATTCTCGATTATCATTTGCTGATGATTTTGAGAGTGAAAATGAAGA
GGAGAATGGAGAAATTGAAAATTTGAAAACAAAGAGGCTTGCGCAAGCGA
AATTGGGAAAAGATCCAACGGTGGAGACTAGCTTTTTGCCTGACAGTGAG
AGAGAGGCAGAGGAGCAATCTGAGCGTGAACGGTTGCAGCGACAGTGGCT
TCGTGAGCAGGAGCAAATTCGAAATGAGCCCCTTCAAATCACTTATAGTT
ATTGGGATGGAGCAGGCCATAGACGAGTTATCCAGGTTCGGAAGGGTGAT
ACAATAGGAGAGTTTCTTCGGGCTGTTCAACAACAACTTGCACCTGAGTT
TCGAGAAATCCGAACGACGTCAGTGGGAAATTTGCTTTATGTTAAAGAAG
ATCTTATCATCCCTCATCAACACAGTTTTTATGAGCTTATTGTTAACAAA
GCCAGGGGGAAAAAGTGGACCGCTTTTTCACTTTGATGTTCACGAGGATG
TACGGACGATTGCTGATGCAACTATAGAAAAAGATGAGTCCCATGCTGGG
GAAAGTGGTGGAGAGGCACTGGTATGAAAAGACCAGCATATCTTCCCTGC
TCTCGATGGGAGATTATGACCCAACCAGAAAATGGAAGCGATCCCCCTTC
CCTGGGGGATTGATCAGTTCGGCTTTGGGCAAATAATTTTTTCTGAAAAC
GTTTGATTTGTTTTCGGGCAATTAACTTAAATCTTGAACCTTGTTGGGGC
CCTTTTTGAAAGGCTTTTTCCCAAATTTTTTTAAATTGGAAAGGGGCCCT
GGTTTTTGTGGGTTTTTTTGAAAATTCCTATTTATCACAAAAAAAAAAAA
TGGGGGGCATTGGGGAAAAAGAAAGAGGGAATAATATTATAAAAAACAAC
AATCATCTACCCCCCCCTTTGGG