DY262653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262653 vs. ExPASy Swiss-Prot
Match: UTP6_SCHPO (U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe GN=utp6 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.040e-28 Identity = 74/210 (35.24%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 124 MADVVQYRLERMVDELDDLERRGLFTRHEISEIVKQRRKFEYRLKRPSPLKQDYLAYIEYESQLDALRRLRKKSIGRDEGRERRVXXXXXXXXXXXXGVARILEIYRLAVMRFKGDIELWFKYMEFCRQRKN-GRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNVTAARALMQNGLRVCPTSEELWVEYLRMELTYLNKLKARKVAL 750 MA+ VQY +E+ V EL+DL + +F R EI+ I+K RR FE +L R D+L+YI+YE L+ LR R K R+ G ++L ++ A +F GD+ LW Y+ + ++ K + K+ ++ HP +W+ A EF N NV+AARALM LR+ + +W Y R+EL+Y+ KL AR L Sbjct: 1 MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQYEINLETLRAKRHK----------RLNITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLDYIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRALRLNQENPVIWAAYFRLELSYMTKLFARSQIL 200
BLAST of DY262653 vs. ExPASy Swiss-Prot
Match: UTP6_HUMAN (U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens GN=UTP6 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.318e-28 Identity = 68/207 (32.85%), Postives = 113/207 (54.59%), Query Frame = 1 Query: 124 MADVVQYRLERMVDELDDLERRGLFTRHEISEIVKQRRKFEYRLKRPSPLKQDYLAYIEYESQLDALRRLRKKSIGRDEGRERRVXXXXXXXXXXXXGVARILEIYRLAVMRFKGDIELWFKYMEFCRQ-RKNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNVTAARALMQNGLRVCPTSEELWVEYLRMELTYLNKLKARK 741 MA+++Q R+E + EL+ LER GLF+ EI I+K+ EY+++R + K+D++ Y++YE L L + R+ IG ++ V R+ +++ A ++K D++LW Y+ FC++ R+ KV + ++ H P +WI AA WE + L+ +AR L LR P +L+ EY RMEL + KL+ K Sbjct: 1 MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQYEINLLELIQRRRTRIGYSFKKDE----------IENSIVHRVQGVFQRASAKWKDDVQLWLSYVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYKEYFRMELMHAEKLRKEK 197
BLAST of DY262653 vs. ExPASy Swiss-Prot
Match: UTP6_YEAST (U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae GN=UTP6 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.502e-27 Identity = 75/241 (31.12%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 139 QYRLERMVDELDDLERRGLFTRHEISEIVKQRRKFEYRLKRPSPLKQDYLAYIEYESQLDALRRLRKKSIGRDEGRERRVXXXXXXXXXXXXGVARILEIYRLAVMRFKGDIELWFKYMEFCRQRKN----GRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNVTAARALMQNGLRVCPTSEELWVEYLRMELTYLNKLKARKVALGKDKGTLVRDHRDADEKRGINEKKDLLMPQEEK 849 +Y LE+ + E+DDL +GLFT++E+S I+K+R FE+RL DY+ YI YES ++ LR R K I + RI IY+ +F D++ W Y+ + + R N ++ + Q+++ HP +WI A +E++ + N + R + QNGLR P +LW EY++ EL ++ KL R+ +G L+ + + + NE+K+ P EEK Sbjct: 5 RYYLEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLNSRGSSINDYIKYINYESNVNKLRAKRCKRI---------LQVKKTNSLSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYMKARGNQTSYKKIHNIYNQLLKLHPTNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPDVPKLWYEYVKFELNFITKLINRRKVMG-----LINEREQELDMQ--NEQKNNQAPDEEK 229
BLAST of DY262653 vs. ExPASy Swiss-Prot
Match: UTP6_MOUSE (U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus GN=Utp6 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.709e-27 Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 124 MADVVQYRLERMVDELDDLERRGLFTRHEISEIVKQRRKFEYRLKRPSPLKQDYLAYIEYE-SQLDALRRLRKKSIGRDEGRERRVXXXXXXXXXXXXGVARILEIYRLAVMRFKGDIELWFKYMEFCRQ-RKNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNVTAARALMQNGLRVCPTSEELWVEYLRMELTYLNKLKARK 741 MA+++Q R+E + EL+ LER GLF+ EI I+K+ EY++ R + LK+D++ Y++YE + L+ ++R R R+ V R+ ++ A ++K D++LW Y+ FC++ + K+ + ++ H P +WI AA WE + L+ +AR L LR P +L+ EY RMEL + KL+ K Sbjct: 1 MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQYEINLLELIQR-----------RRARIKYSFKKDEIEYSMVHRVQGVFGRASAKWKDDVQLWLSYIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQEYFRMELMHAEKLRKEK 197
BLAST of DY262653 vs. ExPASy Swiss-Prot
Match: UTP6_DICDI (U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum GN=utp6 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.543e-14 Identity = 53/204 (25.98%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 130 DVVQYRLERMVDELDDLERRGLFTRHEISEIVKQRRKFEYRLKRPSPLKQDYLAYIEYESQLDALRRLRKKSIGRDEGRERRVXXXXXXXXXXXXGVARILEIYRLAVMRFKGDIELWFKYMEFCRQRKN----GRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNVTAARALMQNGLRVCPTSEELWVEYLRMELTYLNKL 729 D V + ++++++E L G+ ++ E +I+K+R E ++ + K D+L YI+YE +LD L R K+ + R + + ++ A +F D LW + +R + GR+ + + P+ +W AA +EF+ N N+ AR L+Q G++ T + LW + MELTY++ L Sbjct: 2 DRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYELELDRLFHKRGKAKNIEFDYRLR------------SALRHAIILFGSATKKFPKDEALWINALNIRMKRASKEGTGRLFSIALSNL---PRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNKTDKSLWHYFFLMELTYISLL 190 The following BLAST results are available for this feature:
BLAST of DY262653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262653 ID=DY262653; Name=DY262653; organism=Citrus clementina; type=EST; length=1319bpback to top |