DY262656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL1_ARATH (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 3.960e-73 Identity = 127/160 (79.38%), Postives = 147/160 (91.88%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLENV 480 QAY+IQ+ ++AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWGTGSPLREFLHVDDLADA VF++D Y GLEH+N+GSG+EV+I+ELAELVKEVVGFEG+L WD +KPDGTP+KLMDSSKLA LGW K+ L++GL+ TY W L+NV Sbjct: 150 QAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTPKVSLRDGLSQTYDWYLKNV 309
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.755e-73 Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLENV 480 QAY+IQ+ F+AIS MPTNLYGP DNFHPENSHVLPAL+RRFHEAK + A EVVVWGTGSPLREFLHVDDLADAV+F+MD Y GLEH+NVGSG EV+IKELAELVKEVVGF+G+LVWDSSKPDGTP+KLMDSSK+ +GWK K+ LK GL +TYKW +ENV Sbjct: 164 QAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEMGWKPKVPLKEGLVETYKWYVENV 323
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL2_ARATH (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.823e-73 Identity = 128/162 (79.01%), Postives = 147/162 (90.74%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLENVKQ 486 QAY++Q++++AISGMPTNLYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWG+GSPLREFLHVDDLADA VF+MD+Y G EH+NVGSG EV+IKELAELVKEVVGF+G+LVWD++KPDGTP+KLMDSSKLA LGW KI LK+GL+ TY+W LENV Q Sbjct: 164 QAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGLSQTYEWYLENVVQ 325
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 9.823e-48 Identity = 90/168 (53.57%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD---------EYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLEN 477 ++Y QY + S MPTNLYGP+DNFHP NSHV+PAL+RRFHEA A +VVVWG+G+P+REFLHVDD+A A + +M+ L H+NVG+G + +I+ELA+ + +VVG++G +V+D+SKPDGTP+KL+D ++L LGW +I L+ GLA TY+W LEN Sbjct: 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 315
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL2_ORYSJ (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.188e-47 Identity = 82/159 (51.57%), Postives = 122/159 (76.73%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLEN 477 QA + +Y +AI+ P NLYGP F PE+SHV+PAL+RRFH AK+ GA EV VWG+G+ REF HVDDLA+AVV +M+ Y G EH+NVGSG+EV+++ELAE V+ VVG+EG + WD+++P+G ++++DS ++ LGW+ ++ L++G+ D Y++ L + Sbjct: 180 QAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRKLGWEPRVALRDGIQDLYRFYLRH 338
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.783e-45 Identity = 83/160 (51.88%), Postives = 118/160 (73.75%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKWNLENV 480 QAY+ QY N IS MPTNLYGP D F +SHV+PAL+R+ HEAK+ + +WG+G+P R+FL+ +D +DA+VF++ Y EH+N+GSG E+SI ELA +V VVGF+G++V+D+SKPDGTP+KL+ S +L +GW+ K L+ GLA +Y+ + NV Sbjct: 152 QAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYESFVSNV 311
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL_PONAB (GDP-L-fucose synthetase OS=Pongo abelii GN=TSTA3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25 Identity = 67/165 (40.61%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKL-AGLGWKAKIELKNGLADTYKWNLENVKQ 486 +AY QY + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+ + VWGTG P R+F++ DLA ++++ EY+ +E L+VG EVSIKE AE V E + F GE+ +D++K DG KK +SKL L K + +T W +N +Q Sbjct: 155 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGKPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEDDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 318
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL_HUMAN (GDP-L-fucose synthetase OS=Homo sapiens GN=TSTA3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25 Identity = 67/165 (40.61%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKL-AGLGWKAKIELKNGLADTYKWNLENVKQ 486 +AY QY + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+ + VWGTG+P R+F++ DLA ++++ EY+ +E L+VG EVSIKE AE V E + F GE+ +D++K DG KK +SKL L K + +T W +N +Q Sbjct: 155 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 318
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: NOLK_AZOC5 (Nodulation protein nolK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nolK PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 25 FNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGL-EHLNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKLAGLGWKAKIELKNGLADTYKW 465 FN + + NLYG DNF P SH+LPA++ + H+A G++ V +WG G+ REF+ D A ++ ++ + + +NVG GK++S+ E LV V+G+ GE V+D ++P G KLMD + L LGW + L+ G+ TY++ Sbjct: 156 FNYKTLIACNLYGVGDNFDPRRSHLLPAIIEKIHKASQCGSESVSIWGDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARVIGWSGEFVYDLNRPVGMRSKLMDITHLTALGWVPERSLEGGIRSTYQY 303
BLAST of DY262656 vs. ExPASy Swiss-Prot
Match: FCL_CRIGR (GDP-L-fucose synthetase OS=Cricetulus griseus GN=TSTA3 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 1 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAELVKEVVGFEGELVWDSSKPDGTPKKLMDSSKL-AGLGWKAKIELKNGLADTYKWNLENVKQ 486 +AY Q+ + +PTN++GP+DNF+ E+ HVLP L+ + H AK NG+ + VWGTG P R+F++ DLA ++++ EY+ +E L+VG EVSIKE AE V E + F GE+ +DS+K DG KK + KL A L K + +T W +N +Q Sbjct: 155 RAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSNGS-ALTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFCGEVTFDSTKSDGQYKKTASNGKLRAYLPDFRFTPFKQAVKETCAWFTDNYEQ 318 The following BLAST results are available for this feature:
BLAST of DY262656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262656 ID=DY262656; Name=DY262656; organism=Citrus clementina; type=EST; length=754bpback to top |