DY262667

Overview
NameDY262667
Unique NameDY262667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1334
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262667_ssr113 microsatellite DY262667_ssr113:113..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DNJ49_ARATH (Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.243e-45
Identity = 96/216 (44.44%), Postives = 139/216 (64.35%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG-SDEPVYQPRTHTRAARGF---NGFYDSDIDAEEIFRNFF 797
            MDGNKDDA +C +I ++A+ SGD+ RA+KF++ A+RL+PSL VD+++++ ++  + + N             S++  +                 YTEE + +VR I +  DYY ILG+E++C+V+++RKAYRKLSLKVHPDKNKAPG+EEAFK VSKAF CLS+  SR+++D  G  DE  +  R + R  R +   N F+D + D EEIFR  F
Sbjct:    1 MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVAACDNLDSVSRN-------------SSVSEKLKTMDGDDDKLETGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHVQRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVF 203          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_XENLA (DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.203e-40
Identity = 94/255 (36.86%), Postives = 140/255 (54.90%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPP--------ARTQFRHFNFGQGVATGTADRNGSDGFNL 902
            M+ N+D+A +C +IGK A+E+GD+ +A +F SKA RL PS     ++ ++E   +T  NGP +E  SK ++Q                       +T++Q+  V++IKK K YYE+LGV      ED++KAYRKL+LK HPDKN APGA EAFK +  A+  LSN E RK+YD+TGS++ V     H      ++  +++DI  E++F  FF GG P          RT++ H            +     GF++
Sbjct:    1 MESNRDEAERCVRIGKAAIEAGDKEKARRFFSKAERLYPSSEARVLLDALEKN-DTAGNGPQSEKMSKSTEQPKAEK---------DSSGDTGKGHTQDQVDGVQRIKKCKTYYEVLGVSPDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDNV--QNNHRNGGFDYHRGFEADITPEDLFNMFFGGGFPSGSVHTFSNGRTRYSHHQHHHHSGHDREEERADGGFSM 243          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.270e-39
Identity = 88/217 (40.55%), Postives = 126/217 (58.06%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+ NKD+A +C  I  +A++S    RA++FL KA+RL P+  V  +I S+  +P +  + P     +  + +                       YT EQ+A V+++K+ KDYYEILGV RS + ED++KAYRKL+LK HPDKN APGA EAFKA+  A+  LSN E RK+YD  G D+   Q   H  +   F+  +++DI  E++F  FF GG P
Sbjct:    1 MESNKDEAERCISIALKAIQSNQPERALRFLEKAQRLYPTPRVSALIESLNQKPQSTGDHPQPTDTTHTTTKKA-GGTETPSANGEAGGGESAKGYTSEQVAAVKRVKQCKDYYEILGVSRSASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKS--QAARHGHSHGDFHRGFEADISPEDLFNMFFGGGFP 214          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB12_HUMAN (DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 2.270e-39
Identity = 91/221 (41.18%), Postives = 127/221 (57.47%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXX----YTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+ NKD+A +C  I  +A++S    RA++FL KA+RL P+  V  +I S+  +P T  + P       P+D +   HR                     YT EQ+A V+++K+ KDYYEILGV R  + ED++KAYR+L+LK HPDKN APGA EAFKA+  A+  LSN E RK+YD  G D+   Q   H      F+  +++DI  E++F  FF GG P
Sbjct:    1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQPP------PTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKS--QAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFP 213          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB12_BOVIN (DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 6.604e-39
Identity = 89/217 (41.01%), Postives = 122/217 (56.22%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+ NKD+A +C  I  +A++S    RA++FL KA+RL P+  V  +I S+  +P   P G   +P                              YT EQ+A V+++K+ KDYYEILGV R  + ED++KAYRKL+LK HPDKN APGA EAFKA+  A+  LSN E RK+YD  G D+   Q   H      F+  +++DI  E++F  FF GG P
Sbjct:    1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQ--PAGDQPQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKG--QAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFP 213          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_XENTR (DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 8.625e-39
Identity = 91/255 (35.69%), Postives = 137/255 (53.73%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPP--------ARTQFRHFNFGQGVATGTADRNGSDGFNL 902
            M+ N+D+A +C +I K A+E+GD+ +A +FLSKA RL PS     ++ + E   +T  NGP +   +K ++Q                       +T++Q+  V++IKK K YYE+LGV      ED++KAYRKL+LK HPDKN APGA EAFK +  A+  LSN E RK+YD+TGS++ +     H      ++  +++DI  E++F  FF GG P          R ++ H            D     GF++
Sbjct:    1 MESNRDEAERCVRIAKAAIEAGDKEKAKRFLSKAERLYPSSEARALLQAFEKN-DTAGNGPQSAKMAKGTEQPKAEK-----DSNASASSDTGKGHTQDQLDGVQRIKKCKTYYEVLGVSTDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDQM--QNNHRNGGFDYHRGFEADITPEDLFNMFFGGGFPSGSVHTFSNGRARYSHHQHHHHSGHDREDERADGGFSM 247          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_HUMAN (DnaJ homolog subfamily B member 14 OS=Homo sapiens GN=DNAJB14 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.054e-36
Identity = 86/217 (39.63%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+GN+D+A KC +I +EAL +G+R +A +FL KA +L P      ++  I    +T  N P     S   DQS    +                 YT++Q+  V  I K K+YYE+LGV +    ED++KAYRKL+LK HPDKN APGA +AFK +  A+  LSN E RK+YD+TG++E     + + R    F+   ++DI  E++F  FF GG P
Sbjct:    1 MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMKNGSTAGNSPHCRKPSGSGDQS----KPNCTKDSTSGSGEGGKGYTKDQVDGVLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTGNEEQACNHQNNGRF--NFHRGCEADITPEDLFNIFFGGGFP 211          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_BOVIN (DnaJ homolog subfamily B member 14 OS=Bos taurus GN=DNAJB14 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.054e-36
Identity = 86/217 (39.63%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+GN+D+A KC +I +EAL +G+R +A +FL KA +L P      ++  I    +T  N P     S   DQS    +                 YT++Q+  V  I K K+YYE+LGV +    ED++KAYRKL+LK HPDKN APGA +AFK +  A+  LSN E RK+YD+TG++E     + + R    F+   ++DI  E++F  FF GG P
Sbjct:    1 MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMKNGSTAGNSPHCRKPSGGGDQS----KPNCTKDSSSGSGESGKGYTKDQVDGVLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTGNEEQACNQQNNGRF--NFHRGCEADITPEDLFNIFFGGGFP 211          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_PONAB (DnaJ homolog subfamily B member 14 OS=Pongo abelii GN=DNAJB14 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.166e-35
Identity = 85/217 (39.17%), Postives = 122/217 (56.22%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+GN+D+A KC +I +EAL +G+R +A +FL KA +L P      ++  I    +T  N P     S   DQS    +                 YT++Q+  V  I K K+ YE+LGV +    ED++KAYRKL+LK HPDKN APGA +AFK +  A+  LSN E RK+YD+TG++E     + + R    F+   ++DI  E++F  FF GG P
Sbjct:    1 MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMKNGSTAGNSPHCRKPSGSGDQS----KPNCTKDSTSGSGEGGKGYTKDQVDGVLSINKCKNCYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTGNEEQACNHQNNGRF--NFHRGCEADITPEDLFNIFFGGGFP 211          
BLAST of DY262667 vs. ExPASy Swiss-Prot
Match: DJB14_MOUSE (DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.988e-35
Identity = 85/217 (39.17%), Postives = 122/217 (56.22%), Query Frame = 3
Query:  162 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESEPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDYYEILGVERSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMP 812
            M+GN+D+A KC +I +EAL +G+R +A +FL KA +L P      ++  I    +T  +          SDQS    +                 YT++Q+  V  I K K+YYE+LGV +    ED++KAYRKL+LK HPDKN APGA +AFK +  A+  LSN E RK+YD+TGS+E     + + R    F+   ++DI  E++F  FF GG P
Sbjct:    1 MEGNRDEAEKCVQIAREALSAGNRDKAQRFLQKAEKLYPLPAARALLEIIMKNGSTAGSSTHCRKPPGSSDQS----KPSCGKDGTSGAGEGGKVYTKDQVEGVLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTGSEEQACNHQNNGRF--NFHRGCEADITPEDLFNIFFGGGFP 211          
The following BLAST results are available for this feature:
BLAST of DY262667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNJ49_ARATH1.243e-4544.44Chaperone protein dnaJ 49 OS=Arabidopsis thaliana ... [more]
DJB14_XENLA1.203e-4036.86DnaJ homolog subfamily B member 14 OS=Xenopus laev... [more]
DJB12_MOUSE2.270e-3940.55DnaJ homolog subfamily B member 12 OS=Mus musculus... [more]
DJB12_HUMAN2.270e-3941.18DnaJ homolog subfamily B member 12 OS=Homo sapiens... [more]
DJB12_BOVIN6.604e-3941.01DnaJ homolog subfamily B member 12 OS=Bos taurus G... [more]
DJB14_XENTR8.625e-3935.69DnaJ homolog subfamily B member 14 OS=Xenopus trop... [more]
DJB14_HUMAN1.054e-3639.63DnaJ homolog subfamily B member 14 OS=Homo sapiens... [more]
DJB14_BOVIN1.054e-3639.63DnaJ homolog subfamily B member 14 OS=Bos taurus G... [more]
DJB14_PONAB1.166e-3539.17DnaJ homolog subfamily B member 14 OS=Pongo abelii... [more]
DJB14_MOUSE1.988e-3539.17DnaJ homolog subfamily B member 14 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CD10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262667 ID=DY262667; Name=DY262667; organism=Citrus clementina; type=EST; length=1334bp
CACCCCCTGAATCCTTGAACCCCTCAAATTCAAATTCTTATGTCAGATCC
ATTATATTAACACTATTATGATTCGCAATCGGCAATAAATTAGGATTAGG
GTTTGTGATATTTATATATATATTGTGTTATTTGTTCTTGTGTGGTTTTT
CAATTTTCATCATGGATGGGAATAAAGATGACGCCTTGAAATGTTTCAAA
ATCGGCAAAGAAGCGCTAGAATCAGGCGATCGAGCGCGTGCGATCAAATT
TCTGTCCAAGGCTCGCCGCCTCGATCCTTCTCTTCCGGTTGACGACATCA
TCTCATCCATCGAGTCCGAGCCCAACACAAACCCTAACGGCCCGTCCGCA
GAGCCCAATTCAAAGCCGTCCGATCAATCGACGATCCGACACCGGGGCCC
ATCAACTGGCGCGTCTCCGTCAGCTTCTTCTTCGTCCTCTCCGGCGTACA
CCGAAGAGCAAATCGCGATCGTGAGACAGATTAAGAAGACGAAAGATTAT
TACGAAATCCTAGGGGTTGAAAGATCTTGTACGGTCGAAGATGTACGGAA
AGCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACAAAGCTC
CAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAGTGTTTG
AGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGATGAGCC
CGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTAACGGGT
TTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTTTTCTTC
GGGGGTATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTTCGGGCA
GGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGTTTAATT
TACGTGCCTTGATTCAGTTTGTTGCTGTGATTTTGATAATTCTCCTTCCG
ATTTTGCCGTCTTCTGATTCAATTTATGCCTTTGTCAAGGTCTTACCTTT
ATAATACCAATTTACCACGGAAAAGAGGGGTGAATTTTTTAGTGAAGTCT
AACAAATTTTAACCGGACTATCCGGGGGGGTAAGGGTTCAAAGAGTGAGG
CTGGGAAAAACAAAGTTAAAAAGGATTATTTTAATATTCCTTGCCAAAAA
TTGCCCGTTTAAAAATTTCCCGGGCCCCCCGGGGGGGGTTTTTTAAAAAA
GGAAACCTCCCCCTTTGTTGAAGAGTGGGGACCAAAAAAATTTTACTAAT
TCTTCCCCCCCCGTCTGAGAAAAAAATCAAAAAACCAAAAAAAAGGGTCT
CTTTATAACGTGGCGCCCCCCCCTTTTTTGTTCT
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