DY262670

Overview
NameDY262670
Unique NameDY262670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262670_ssr288 microsatellite DY262670_ssr288:288..302. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 2.147e-128
Identity = 229/287 (79.79%), Postives = 231/287 (80.49%), Query Frame = 3 
Query:   42 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXX-EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            MFGR PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDVIHPLKVSLEDLYNGTSKKLSLSRNVI                    QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC QCKGEKV+QEKKVLEVIVEKGMQN QKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSL E+LCGF
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG-GHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGF 285

HSP 2 Score: 43.1282 bits (100), Expect = 2.147e-128
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            LLIKS  GEVV+ DQF+    +G PMYQR F KG+  + F
Sbjct:  297 LLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHF 336
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 431.409 bits (1108), Expect = 1.805e-127
Identity = 217/287 (75.61%), Postives = 230/287 (80.14%), Query Frame = 3 
Query:   42 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXX-EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            MFGRAPKKSD+T+YYEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLEDL+ GT+KKLSLSRNVI                    QG+GMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKV+QEKKVLEV+VEKGMQ+GQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLF EHTLSLTEALCGF
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGF 287

HSP 2 Score: 47.7506 bits (112), Expect = 1.805e-127
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            LLIKSNLGEVV+ DQF+    +G P+YQR F KG+  + F
Sbjct:  299 LLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHF 338
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 9.779e-126
Identity = 215/287 (74.91%), Postives = 227/287 (79.09%), Query Frame = 3 
Query:   42 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXX-EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            MFGRAPKKSDNTKYYE+LGVSKNA+ +DLKKAYRKAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKE        HDPFDI                        EDV+HPLKVSLEDLYNGTSKKLSLSRNV+                    QGSGMKVSIR LGP MIQQMQHPCNECKGTGE I+DKDRCPQCKGEKV+Q+KKVLEV VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF EH+LSLTEALCGF
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPCNECKGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGF 287

HSP 2 Score: 44.669 bits (104), Expect = 9.779e-126
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            LLIKSN GEV++ DQF+    +G PMYQR F +G+  + F
Sbjct:  299 LLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHF 338
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 412.149 bits (1058), Expect = 3.450e-120
Identity = 210/287 (73.17%), Postives = 222/287 (77.35%), Query Frame = 3 
Query:   42 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            MFGR P KKSDNTK+YEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                       EDV+HPLKVSLED+Y GT KKLSLSRN +                    QGSGMKVSIR LGP MIQQMQH CNECKGTGETIND+DRCPQCKG+KVI EKKVLEV VEKGMQ+ QKITF G+ADEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFVEHTLSLTEALCGF
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287

HSP 2 Score: 42.743 bits (99), Expect = 3.450e-120
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 1 
Query:  928 ALLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            +LLIKSN GEVV+ D ++    +G P+YQR F KG+  + F
Sbjct:  298 SLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHF 338
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 397.127 bits (1019), Expect = 7.136e-115
Identity = 200/288 (69.44%), Postives = 220/288 (76.39%), Query Frame = 3 
Query:   42 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXX-EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            MFGR P +KSDNTK+YEILGV K A+ +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLED+Y GT+KKLSLSR  +                    QGSGMK+SIR  GP M+QQ+QH CN+CKGTGETIND+DRCPQCKGEKV+ EKKVLEV VEKGMQ+ QKITF G+ADEAPDTVTGDIVFV+QQKEHPKFKRKG+DLFVEHT+SLTEALCGF
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGF 288

HSP 2 Score: 40.0466 bits (92), Expect = 7.136e-115
Identity = 19/40 (47.50%), Postives = 26/40 (65.00%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            LLIKS  GEVV+ D ++    +G P+YQR F KG+  + F
Sbjct:  300 LLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHF 339
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 2.069e-114
Identity = 199/266 (74.81%), Postives = 207/266 (77.82%), Query Frame = 3 
Query:  105 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXX-EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            KNAS DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLE+LYNGTSKKLSLSRNVI                    QGSGMKVSIR LGP MIQQMQHPCN+CKGTGE INDKDRCP CKGEKV+QEKKVLEV VEKGMQNGQ+ITFPGEADEAPDTVTGDIVFVLQQKEHPKF+RKGDDLF +HTLSLTEALCGF
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGTGEMINDKDRCPLCKGEKVVQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGF 266

HSP 2 Score: 45.8246 bits (107), Expect = 2.069e-114
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            LLIKSN GEVV+ DQF+    +G PMYQR F +G+  + F
Sbjct:  278 LLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQF 317
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 3.408e-70
Identity = 134/277 (48.38%), Postives = 178/277 (64.26%), Query Frame = 3 
Query:   72 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            +TK Y+ILGV   AS+++LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGF
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGF 282

HSP 2 Score: 25.7942 bits (55), Expect = 3.408e-70
Identity = 11/40 (27.50%), Postives = 21/40 (52.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            +++K   G+V++    R    +G P Y+  F KG+  + F
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 3.408e-70
Identity = 134/277 (48.38%), Postives = 178/277 (64.26%), Query Frame = 3 
Query:   72 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            +TK Y+ILGV   AS+++LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGF
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGF 282

HSP 2 Score: 25.7942 bits (55), Expect = 3.408e-70
Identity = 11/40 (27.50%), Postives = 21/40 (52.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            +++K   G+V++    R    +G P Y+  F KG+  + F
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 3.408e-70
Identity = 134/277 (48.38%), Postives = 178/277 (64.26%), Query Frame = 3 
Query:   72 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            +TK Y+ILGV   AS+++LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC +C+G+KVI+E K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGF
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGF 282

HSP 2 Score: 25.7942 bits (55), Expect = 3.408e-70
Identity = 11/40 (27.50%), Postives = 21/40 (52.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            +++K   G+V++    R    +G P Y+  F KG+  + F
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKF 333
[Close]
BLAST of DY262670 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.286e-69
Identity = 132/276 (47.83%), Postives = 175/276 (63.41%), Query Frame = 3 
Query:   75 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 899
            T+YY+ILGV  +AS +++KKAYRK A+K HPDK  D  EKFK ++QAYEVLSDP+KR++YDQ GE A+KE          P DI                       ++V+H L V+LEDLYNG +KKL+L +NVI                    +G GM++ I+ +GP M+QQ+Q  C ECKG GE IN KDRC  C G KVI+EKK++EV VEKGM++GQKI F GE D+ P+   GD++ VL QK+H  F+R+G DL ++  + L+EALCGF
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDIFDMFFGGGGRMARERRG------KNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGF 274

HSP 2 Score: 28.1054 bits (61), Expect = 1.286e-69
Identity = 13/40 (32.50%), Postives = 21/40 (52.50%), Query Frame = 1 
Query:  931 LLIKSNLGEVVQADQFRP*MKKGWPMYQRAFNKGETVLSF 1050
            L+I S  GEV++    R    +G P+Y+    KG  ++ F
Sbjct:  286 LVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQF 325
The following BLAST results are available for this feature:
BLAST of DY262670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_CUCSA2.147e-12879.79DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU1.805e-12775.61DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH2_ALLPO9.779e-12674.91DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH3.450e-12073.17Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH7.136e-11569.44Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO2.069e-11474.81DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJA2_MOUSE3.408e-7048.38DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN3.408e-7048.38DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN3.408e-7048.38DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA4_HUMAN1.286e-6947.83DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100CE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262670 ID=DY262670; Name=DY262670; organism=Citrus clementina; type=EST; length=1249bp
TCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGATGTTCGGA
AGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGT
CTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCG
CCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAG
TTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATA
TGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTG
GTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCA
TTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGT
AATCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTA
AGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAG
GGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGG
AATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGC
AGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAG
GATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGT
CTTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGT
TCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTA
TTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGA
CCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTC
ATTTGTAATAACTCATTTGAATGGGCGGCACTCCTCATCAAATCCAACCT
GGGGGAAGTAGTCCAGGCGGACCAATTCAGGCCATAAATGAAGAAAGGAT
GGCCTATGTATCAGAGGGCATTTAATAAAGGGGAAACTGTACTTTCTTTT
CCCTGGTGAATTTCCCTGAATTCCCGGGCCCAAAACCAGGGCAGAAAGCT
GGAAAACCGTACTACCTCCAGGGGACCTCATCCAGCCTCCCCAAATTGGG
GAACGTGATAAAGGGGGAAAAAAACCCCCCTCAGGGAGGGGAAATTTTGG
GGGAGAAAAAGGGCAAGAAGAACAACAAAAACAATCCTCCGGGAGGGAT
back to top