DY262672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=1 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 1.282e-106 Identity = 201/349 (57.59%), Postives = 247/349 (70.77%), Query Frame = 2 Query: 113 LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTWNI-ICVXXXXXXXXXXXXXKCDVHKIPDLIRGSFWVEGWVKKKRIREAKGGF-GILKEIPSLRFKNWEK 1150 LR E DPDKAL+IY++VS H ASPVSSRYAQ+LTVRRLAK +RFSDIETLIESHKNDPKI +EP+ LIRSYGQA MF+HAMRTF+QMD+ GTPRS +SFNALL AC S+ +DKVP LFDEIP++YN + PDKISYG+L+KS+CDSG+ +KA+E++ +M+ KG L+ LYK+G E A+ LW+EM KKG +LD AAYNVRI + PER+KELI+EM GLKPDTISYN+LMT YC+ M+DEAKKVYEGLE N C+ NA TFRT +C +HKIPD V G V+ K+ +AKG + K+ P W+K Sbjct: 40 LRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKK 388
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 1.088e-97 Identity = 189/349 (54.15%), Postives = 234/349 (67.05%), Query Frame = 2 Query: 113 LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY-NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTWNI-ICVXXXXXXXXXXXXXKCDVHKIPDLIRGSFWVEGWVKKKRIREAKGGFGIL-KEIPSLRFKNWEK 1150 LR DPDKAL IY SVS + SP+SSRYA +LTV+RLAKS+RFSDIE LIESHKN+PKI E +L LIRSYG+A MFDHAM+ F++MD+LGTPR+V+SFNALL AC S L+++VP LFDE P++Y N++PDKISYG+L+KS+CDSG +KA+E++ +ME KG L LYK G +EAE LW EM KG DLD YNVR+ N PER+KEL++EM GLKPDT+SYN+LMT YC MM EAKKVYEGLE+ NA TFRT +C+ VHKIPD EG VK R+ +A+G I+ K+ P W+K Sbjct: 40 LRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKK 384
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 7.164e-41 Identity = 84/237 (35.44%), Postives = 136/237 (57.38%), Query Frame = 2 Query: 212 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 919 TVRRLA +K+F +E ++E P +++E ++ +I YG+ GMF++A + FD+M E R+ +SFNALL AC S+ +D V +F E+P K ++ PD SY L+K C GS +A+ L++E+ENKG L+ Y +G EE E++W+ M +K V D+ +YN R+ E + L D+++ LKPD ++ ++ + +DEA Y+ +E+NGC Sbjct: 77 TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGC 313
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 4.644e-40 Identity = 100/349 (28.65%), Postives = 176/349 (50.43%), Query Frame = 2 Query: 113 LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTW-NIICVXXXXXXXXXXXXXKCDVHKIPDLIRGSFWVEGWVKKKRIREAKGGFGILKEIPSLRFKNWEK 1150 L+SE DPD+ LEI + S + R A V LA+ K FS + L++ +N P + E + + I Y QA M DH++R F +++ R+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y ++K C+SGS+ + ++ EME KG ++ Y + ++E ++ + M+ +GV++ V+ YN+RI + + K L+D M AG+KP+T++Y+ L+ +C + +EAKK+++ + GC ++ + T +C + + +P V G K ++ EAK G +KE + + W + Sbjct: 54 LKSEKDPDRILEICRAASLTPDCRID-RIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNE 401
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.548e-38 Identity = 87/246 (35.37%), Postives = 138/246 (56.10%), Query Frame = 2 Query: 206 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940 D TVRRL +KR +E ++E K +++E + +I YG+AGMF++A + F++M RSV+SFNALL A S+ +D V LF+E+P K ++ PD +SY L+K+ C+ S +A+ LL+E+ENKG L Y +G E E +W++M +K V +D+ YN R+ + L L E++ +GLKPD S+N ++ MDEA+ Y+ + ++G + TF Sbjct: 78 DRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP225_ARATH (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.973e-34 Identity = 77/243 (31.69%), Postives = 129/243 (53.09%), Query Frame = 2 Query: 215 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTF 940 +RRL ++K+FS I+ +++ K I E ++ ++ YG +GM +HA + FD+M EL R+V SFNALL A S+ D+ F E+P+K ++PD ++Y ++K+ C GS D L + E+E G L Y++ E +R+W M+ K + ++ +YN R+ T LID M+ G+ PD +YN L+T Y + ++E K Y ++E G + + T+ Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 9.379e-33 Identity = 92/338 (27.22%), Postives = 164/338 (48.52%), Query Frame = 2 Query: 113 LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTW-NIICVXXXXXXXXXXXXXKCDVHKIPDLIRGSFWVEGWVKKKRIREAKGGFGILKE 1117 L+SE +PD+ LEI S S V R + V LA+ K F + L++ +N P E + I YG+A M D +++TF +++ PR+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y +++ C+SGS+ + ++ EME K ++ YK+ +E ++ M++ GV + VA YN+ I K LID + ++P++++Y+ L+ +C E +DEA ++E + NG ++ + T + +C + + +P + V G + ++ EAK ++KE Sbjct: 49 LKSENNPDRILEICRSTSLSPDYHVD-RIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKE 385
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.401e-28 Identity = 104/392 (26.53%), Postives = 169/392 (43.11%), Query Frame = 2 Query: 11 MTSLRHIRRLCXXXXXXXXXXXXXXXXXXXXXXX----------LRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRTW-NIICVXXXXXXXXXXXXXKCDVHKIPDLIRGSFWVEGWVKKKRIREAKGGFGIL-KEIPSLRFK 1138 M SLRHIRR C L+SE DP+K ++ + + + + +R+A + TV RLA + R IE L+E K P+ +E ++ +I YG+AGM A+ TF MD G RSV SFNA L + + + + P KY + D +S+ + +KS C+ G D A + EME G ++ LYK LW+ M KG ++ +NVRI D L L+ +++ ++PD+I+YN ++ + D A++VY + G N ++T + +C P+L ++G VKK ++ +AK ++ + +P R K Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---VEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSK 388
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.703e-22 Identity = 86/352 (24.43%), Postives = 140/352 (39.77%), Query Frame = 2 Query: 113 LRSEFDPDKALEIYSSVSKHYASPVSS-RYA---QDLTVRRLAKSKRFSDIETLIESHKNDPKITQ-EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA----------------------------------CTRSRLYDKVPILFDEIPKK-----------------------------------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFR 943 LR E DP A++++ + +P RY+ D+ + +L SK F +++ ++ K D +I E CN+I +G+ + A+ FD+M + R+V S N+LL A C++S +D LFDE+ KK Y + P Y L+K+ C G A +L +E ++ L K G + E + EM +KG D YNV I D E ++DEM + GLKPD ISYN ++ + + + +EA ++E + GCS + ++R Sbjct: 16 LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
BLAST of DY262672 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.167e-21 Identity = 67/212 (31.60%), Postives = 102/212 (48.11%), Query Frame = 2 Query: 317 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRT 946 +I + G+ GM F + FD+M G I+FN+LL C+R L++ LFDE+ + + D SY LL + C G D A E+L +M K ++ K G +EA L+ EM G+ LD +YN ++ T G E +++ EM G+K D ++YN L+ Y K DE KKV+ ++ N T+ T Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519 HSP 2 Score: 86.2705 bits (212), Expect = 4.676e-16 Identity = 56/222 (25.23%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 287 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGXXXXXXXXXXXLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSQNATTFRT 946 +I Q+ + N L+ + + G D A QM +V+S++ ++ ++ +D+ LF E+ + ++ D++SY LL + G S++AL++L EM + G L KQG +E +++++EM+++ V ++ Y+ I + GG + E+ E + AGL+ D + Y+ L+ CKN ++ A + + + + G S N T+ + Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589 The following BLAST results are available for this feature:
BLAST of DY262672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262672 ID=DY262672; Name=DY262672; organism=Citrus clementina; type=EST; length=1349bpback to top |