DY262685

Overview
NameDY262685
Unique NameDY262685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1325
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMTB_ARATH (Protein-S-isoprenylcysteine O-methyltransferase B OS=Arabidopsis thaliana GN=ICMTB PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 7.417e-67
Identity = 125/196 (63.78%), Postives = 144/196 (73.47%), Query Frame = 2
Query:  233 MTEMFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFV 820
            MTE+FS T  RQL+QMF A+ FFH SEYILAIA HG+  VTL SLLISK+Y LAML S++EYI EIV F G K  WWISN GL M+I GEI+RK+AI+TAGRSFTH+IK+  EEHH+L+T GVY  +RHPSY GFLIWSVGTQ+MLCNP+S I FA VVW FFA                     A+RVPSGVPFV
Sbjct:    1 MTEIFSDTGFRQLTQMFLAIIFFHTSEYILAIAIHGASKVTLSSLLISKHYALAMLISVLEYIAEIVFFPGLKQHWWISNFGLTMIILGEILRKTAIITAGRSFTHLIKIRREEHHKLVTEGVYQIMRHPSYSGFLIWSVGTQVMLCNPISAIAFAVVVWRFFAERIPYEEHYLKQFFGRQYVEYAQRVPSGVPFV 196          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMTA_ARATH (Protein-S-isoprenylcysteine O-methyltransferase A OS=Arabidopsis thaliana GN=ICMTA PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.652e-66
Identity = 120/196 (61.22%), Postives = 146/196 (74.49%), Query Frame = 2
Query:  233 MTEMFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFV 820
            MTE+FS T+ RQLSQM  ++ FFH+SEYILAI  HG+ +VTL SLLI+K+Y LAML S++EY+ EI+LF G K  WW+SN GL+M+I GEIIRK+AI+TAGRSFTH+IK+ +EEHH L+THGVY  +RHPSYCGFLIWSVGTQ+MLCNP+S + FA VVW FFA                     A  V SGVPFV
Sbjct:    1 MTEIFSDTSIRQLSQMLLSLIFFHISEYILAITIHGASNVTLSSLLITKHYALAMLLSLLEYLTEIILFPGLKQHWWVSNFGLIMIIVGEIIRKAAIITAGRSFTHLIKINYEEHHGLVTHGVYRLMRHPSYCGFLIWSVGTQVMLCNPVSAVAFAVVVWRFFAQRIPYEEYFLNQFFGVQYLEYAESVASGVPFV 196          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_ORYSJ (Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza sativa subsp. japonica GN=ICMT PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 1.040e-52
Identity = 96/179 (53.63%), Postives = 130/179 (72.63%), Query Frame = 2
Query:  287 AVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            A+  FH SEY+LA AFHG ++VT  SLLISK Y+LAM F+M+E++ E +LF   K++W++S VGLVMVI GE+IRK A++TAGRSFTH+I++ +E+ H+LITHGVY  +RHP Y GFLIW+VGTQ+MLCNPLST+ F  V+W FF+                     A++V SG+PF++
Sbjct:   13 ALVIFHGSEYVLAAAFHGRRNVTATSLLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFIE 191          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_ORYSI (Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza sativa subsp. indica GN=ICMT PE=3 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 1.040e-52
Identity = 96/179 (53.63%), Postives = 130/179 (72.63%), Query Frame = 2
Query:  287 AVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            A+  FH SEY+LA AFHG ++VT  SLLISK Y+LAM F+M+E++ E +LF   K++W++S VGLVMVI GE+IRK A++TAGRSFTH+I++ +E+ H+LITHGVY  +RHP Y GFLIW+VGTQ+MLCNPLST+ F  V+W FF+                     A++V SG+PF++
Sbjct:   13 ALVIFHGSEYVLAAAFHGRRNVTATSLLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFIE 191          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_XENLA (Protein-S-isoprenylcysteine O-methyltransferase OS=Xenopus laevis GN=icmt PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.845e-34
Identity = 69/178 (38.76%), Postives = 107/178 (60.11%), Query Frame = 2
Query:  296 FFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            FFH SEY++  A +  +S+++ S L+  S  Y LA L S +E+ +E  ++   K   W+S +GL+MV+ GE++RK A+LTAG +F HI++    + H L+T GVY + RHPSY G+  WS+GTQ++LCNPL  +G+    W FF+                      ++VP+G+PF+K
Sbjct:  106 FFHYSEYLVT-AMNNPRSLSIDSFLLNHSLEYTLAALSSWVEFTIETTIYPDLKQITWLSVIGLIMVLFGEVLRKCAMLTAGSNFNHIVQNEKSDSHTLVTSGVYSWFRHPSYVGWFYWSIGTQVLLCNPLCLVGYTLASWRFFSERIEEEEFSLIHFFGENYLEYKKKVPTGLPFIK 282          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_HUMAN (Protein-S-isoprenylcysteine O-methyltransferase OS=Homo sapiens GN=ICMT PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.662e-32
Identity = 70/195 (35.90%), Postives = 110/195 (56.41%), Query Frame = 2
Query:  245 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            FS ++         ++  FH SEY++  A +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MV+ GE +RK+A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF                       +RVP+G+PF+K
Sbjct:   85 FSQSSWSHFGWYMCSLSLFHYSEYLVT-AVNNPKSLSLDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIK 278          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_MOUSE (Protein-S-isoprenylcysteine O-methyltransferase OS=Mus musculus GN=Icmt PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 4.541e-32
Identity = 70/195 (35.90%), Postives = 110/195 (56.41%), Query Frame = 2
Query:  245 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            FS ++         ++  FH SEY++  A +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MV+ GE +RK+A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF                       +RVP+G+PF+K
Sbjct:   84 FSQSSWNHFGWYVCSLSLFHYSEYLVT-AVNNPKSLSLDSFLLNHSLEYTVAALSSWIEFTLENIFWPELKQITWLSATGLLMVVFGECLRKAAMFTAGSNFNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTEEEEISLIHFFGEEYLDYKKRVPTGLPFIK 277          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_RAT (Protein-S-isoprenylcysteine O-methyltransferase (Fragment) OS=Rattus norvegicus GN=Icmt PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.254e-31
Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = 2
Query:  245 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFVK 823
            FS ++         ++  FH SEY++    +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MVI GE +RK A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF                       +RVP+G+PF+K
Sbjct:   33 FSQSSWNHFGWYVCSLSLFHYSEYLVTTV-NNPKSLSLDSFLLNHSLEYTVAALSSWIEFTLENIFWPELKQITWLSAAGLLMVIFGECLRKVAMFTAGSNFNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTEEEEISLIHFFGEEYLDYKKRVPTGLPFIK 226          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: ICMT_DICDI (Protein-S-isoprenylcysteine O-methyltransferase OS=Dictyostelium discoideum GN=icmt-1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.083e-25
Identity = 58/146 (39.73%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  299 FHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDF--WWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFA 724
            FHM EYI    +H  + ++ +S L+  S  + +A+L S +E+ +E   F   K F  WW   VG + ++ G+I+R  A+ TAG +FTH+++    + H L+T+G+Y ++RHPSY G+ +WSV TQ++L NP+S IGF +  W FF+
Sbjct:   63 FHMWEYIWVTMYHPDK-LSSKSFLLNHSPQFNMALLISFIEFWIEWYFFPSLKTFSLWW---VGAICMVFGQIVRSVAMDTAGSNFTHLVQEEKRDDHVLVTNGIYQYMRHPSYFGWFVWSVSTQVILMNPISIIGFGWASWSFFS 204          
BLAST of DY262685 vs. ExPASy Swiss-Prot
Match: STE14_YEAST (Protein-S-isoprenylcysteine O-methyltransferase OS=Saccharomyces cerevisiae GN=STE14 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.552e-24
Identity = 67/201 (33.33%), Postives = 102/201 (50.75%), Query Frame = 2
Query:  242 MFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLIS--KNYILAMLFSMMEYIVEIVLFRGSKDFWW------ISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAXXXXXXXXXXXXXXXXXXXXXARRVPSGVPFV 820
            +F     +  +    A+  FH  EY +  A +    V   S L++  K+Y+ A  F+++E +VE  LF   K F +       + +G ++VI G+  R  A+ TAG SF+HI+K   E  H L+  GVY + RHPSY GF  W++GTQ++L NPLS + F FV+W FF+                       +V  G+PF+
Sbjct:   40 LFPQIRFKNFNLFIIALSLFHFLEYYIT-AKYNPLKVHSESFLLNNGKSYMAAHSFAILECLVESFLFPDLKIFSYSLATKLCTVLGCLLVILGQYTRTIAMHTAGHSFSHIVKTKKESDHVLVKTGVYSWSRHPSYLGFFWWAIGTQLLLLNPLSLVIFIFVLWKFFSDRIRVEEKYLIEFFSAEYIEYKNKVGVGIPFI 239          
The following BLAST results are available for this feature:
BLAST of DY262685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ICMTB_ARATH7.417e-6763.78Protein-S-isoprenylcysteine O-methyltransferase B ... [more]
ICMTA_ARATH1.652e-6661.22Protein-S-isoprenylcysteine O-methyltransferase A ... [more]
ICMT_ORYSJ1.040e-5253.63Probable protein-S-isoprenylcysteine O-methyltrans... [more]
ICMT_ORYSI1.040e-5253.63Probable protein-S-isoprenylcysteine O-methyltrans... [more]
ICMT_XENLA2.845e-3438.76Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_HUMAN2.662e-3235.90Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_MOUSE4.541e-3235.90Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_RAT2.254e-3135.90Protein-S-isoprenylcysteine O-methyltransferase (F... [more]
ICMT_DICDI1.083e-2539.73Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
STE14_YEAST4.552e-2433.33Protein-S-isoprenylcysteine O-methyltransferase OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA100CF05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262685 ID=DY262685; Name=DY262685; organism=Citrus clementina; type=EST; length=1325bp
CCCTCATCTCTCAAATTCGCACAAACGGCAAACCCGATAAGTTCGTCGAC
GTTGCTGCCGCCGCCGATCGCTGCTTCCGTCGCGTCCTCGTCGTCCGTCG
GCCCTTGCTGTCCTCTGGTTTGAAGTAGACTCCATGAAGTTTCTTCGCTC
ATGTCCTTCAACAAAGCTACCTTTATATAATATCCCGTTGTGGTAAAGCA
GTGACAGAAAATTTATACTTTGTTTGATGAAAATGACAGAAATGTTCAGT
TACACAGCTTGCAGACAGTTATCTCAGATGTTCTTTGCAGTGTTCTTCTT
TCACATGTCTGAGTACATTTTAGCAATTGCCTTTCATGGGAGTCAGAGTG
TCACTCTTAGGTCACTTCTTATCAGCAAAAATTATATTTTGGCAATGCTG
TTCTCTATGATGGAGTACATTGTTGAAATTGTTTTGTTTCGGGGGTCGAA
GGATTTTTGGTGGATAAGCAATGTTGGTCTTGTGATGGTTATAGCTGGGG
AAATCATACGGAAAAGTGCCATTTTAACAGCTGGTCGTTCCTTCACGCAT
ATCATCAAGGTCTGTCATGAGGAACATCACGAACTGATTACACATGGAGT
GTATGGATTTGTCCGTCATCCCAGCTATTGTGGTTTCCTCATTTGGTCAG
TTGGTACCCAGATAATGCTGTGTAATCCCTTGTCCACAATTGGATTTGCA
TTTGTTGTGTGGCATTTCTTTGCTGAAAGAATACCATATGAAGAGTATTT
CTTNGAAGAGTTTTTTGGGATACGATATGAGGAATATGCCCGGCGAGTTC
CTTCTGGAGTGCCATTTGTGAAGTGACAATATATAAATGTGCCATTTGTG
AAGTCACTGTTGTTTTATTAGGGAATATGAAGATTAGAGTTTTGAGGCTG
AAGTGAGCAATGGTTGGGCAGAACGAAAAATTTATTTACAACTTTTTTTG
TGCTTTTTGTACTCGGGGGATGTTTGCTATGGAATAGGGTTAAGGTTTTA
AAAAGAAAAGCTGTTGTTATGGTGGGTTTAGGAAAAATGCTTTAGAAAAA
TTAATGGAAAAACTACAAAAATTCATCCCGATTTATTTTATTCATTTGGA
ATTTTATGTTTTCCCCTCAAAAAAATTTGAAAAAATAGAAAGGTTTTTTT
TTAAAAACCCCCTTAAGGGGGGGCGGGTTTGGAGAGGAGATTTTTTTTTT
TGGTTTTGGCGGGTTTCTCTTAAAAGAAAAAATTTTTGTTAGGGGCCCCA
AAGGGGCTCTCTCTTGGGGGGGGAGAAAAAGACAAATACAAATTTTAAAA
AATATATTTTTTTATAGTAAAAAAA
back to top