DY262697

Overview
NameDY262697
Unique NameDY262697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1333
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262697_ssr3 microsatellite DY262697_ssr3:3..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 1.101e-118
Identity = 217/309 (70.23%), Postives = 246/309 (79.61%), Query Frame = 1
Query:  253 MSFDEMGFCGDMNFFSA-PLGDADMAVQP-SEPEATVEDDYTDEEMDVDELERRMWKDKMRLKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFARDQGAPPYRKHMN*KGDGKVVVLTAVIKLMSPNFGQNSKAWGGN*NACKKRGQPRKVPNGW-AIFN*EEGLGSKNLIPKS 1170
            M F+EMG CG+M+FFS+  LG+ D    P +EP++ VEDDYTD+E+DVDELERRMW+DKMRLKRLKEQ +GKEG+D AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE GKPVTGASDNLREWWKDKVRFDRNGPAAI KYQA+N++PG +EG N IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPL KGV PPWWP GK++WW QLG  +DQG  PY+K  + K   KV VLTAVIK M P+  +  K      + C +     K    W AI N EE L ++ L P+S
Sbjct:    1 MMFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKL--VRQSKCLQDKMTAKESATWLAIINQEESL-ARELYPES 306          
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 2.458e-110
Identity = 206/310 (66.45%), Postives = 238/310 (76.77%), Query Frame = 1
Query:  250 MMSFDEMGFCGDMNFFSAPLGDADMAVQPSEPEATVED-DYTDEEMDVDELERRMWKDKMRLKRLKEQ-SRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINA-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFARDQGAPPYRKHMN*KGDGKVVVLTAVIKLMSPNFGQNSKAWGGN*NACKKRGQPRKVPNGWAIFN*EEGLGSKNLIPKS 1170
            MM F+EMG  G+M+FFS+        +  +E E  VED DYTD+EMDVDELE+RMW+DKMRLKRLKEQ S+ KEG+D +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQ++N++ G +   N+ +GPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPL KGVSPPWWP G +EWW QLG   +QG PPY+K  + K   KV VLTAVIK MSP+  +  K      + C +     K    W     +E + ++ L P+S
Sbjct:    1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKMRLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKL--VRQSKCLQDKMTAKESATWLAIINQEEVVARELYPES 308          
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIL3_ARATH (ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 4.678e-77
Identity = 147/256 (57.42%), Postives = 187/256 (73.05%), Query Frame = 1
Query:  307 LGDADMAV----QPSEPEATVED-----DYTDEEMDVDELERRMWKDKMRLKRLKE-QSRGKEGIDMAKQ-RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFARDQGAPPYRKHMN*KGDGKVVVLTAVIKLMSPNFGQ 1041
            +GD  M+V      +EP+    D     D +DEE+D D+LERRMWKD++RLKR+KE Q  G +G    +  ++  +QA+RKKMSRAQDGILKYMLK+MEVCK +GFVYGIIPEKGKPV+G+SDN+R WWK+KV+FD+NGPAAIAKY+ +    GK++G      +   LQ+LQD TLGSLLS+LMQHCDPPQR++PL KG  PPWWPTG +EWW +LG  + Q +PPYRK  + K   KV VLTAVI  M P+  +
Sbjct:    1 MGDLAMSVADIRMENEPDDLASDNVAEIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNR---NSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQ-SPPYRKPHDLKKMWKVGVLTAVINHMLPDIAK 252          
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIL4_ARATH (Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.486e-70
Identity = 133/242 (54.96%), Postives = 174/242 (71.90%), Query Frame = 1
Query:  328 VQPSEPEATVEDDYTDEEMDVDELERRMWKDKMRL-KRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTP---HTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFARDQGAPPYRKHMN*KGDGKVVVLTAVIKLMSPNFGQ 1041
            V+  EP + ++D+  +EE+  D+L+RRMWKD+  + K+LK+Q R    + ++      E +RRKKM+R+QD +LKYM+K+MEVCKA+GFVYGI+PEKGKP+TG+SD+LR WWK+ V+FD+N P AI  Y A  +     E I+    +    H LQELQDTTLGSLLSALMQHC PPQRRFPL KG++PPWWPTG + WW + G A + GAPPYRK  + +   KV VL AVIK MSPN G+
Sbjct:    4 VEELEPLSPMDDE--EEEISYDDLKRRMWKDRNLMEKKLKQQKRHSNDV-VSFTTHRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLALAAAAAAAELIDKSSSSSSLLHMLQELQDTTLGSLLSALMQHCMPPQRRFPLEKGIAPPWWPTGTELWWGEQGAAHEHGAPPYRKPHDLRKSWKVSVLAAVIKHMSPNLGR 242          
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIL2_ARATH (ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 1.412e-65
Identity = 133/247 (53.85%), Postives = 169/247 (68.42%), Query Frame = 1
Query:  349 ATVEDDYTDEEMDVDELERRMWKDKMRLKRLKEQSRGKEGIDMAKQRQSQ---EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQAD-NSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFARD-QGA-PPYRKHMN*KGDGKVVVLTAVIKLMS------PNFGQNSKA 1053
            A  +D  +DEEM+++ELE+++W+DK RLKRLKE ++   G  +  ++Q     E + ++ M +AQDGILKYM K ME  KAQGFVYGI+ E GK V G+SDNLREWWKDKVRFDRNGPAAI K+Q D N   G + G      T   L ELQDTTLG+LLSAL  HC+PPQRRFPL KGV+PPWWPTGK++WW QL    D +G  PPY+K  + K   K+ VL  VI+ M+      PN  + S++
Sbjct:   34 ALCDDLSSDEEMEIEELEKKIWRDKQRLKRLKEMAKNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRDINLSDGSDSGSEVGDSTAQKLLELQDTTLGALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKEDWWDQLSLPVDFRGVPPPYKKPHDLKKLWKIGVLIGVIRHMASDISNIPNLVRRSRS 280          
BLAST of DY262697 vs. ExPASy Swiss-Prot
Match: EIL5_ARATH (ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.021e-63
Identity = 134/266 (50.38%), Postives = 167/266 (62.78%), Query Frame = 1
Query:  328 VQPSEPEATVED-DYTDEEMDVDELER------------RMWKDKMRLKRLKEQSRGKEGIDMAKQRQSQ---------------EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKY--QADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLXKGVSPPWWPTGKKEWWAQLGFAR-DQGAPPYRKHMN*KGDGKVVVLTAVIKLMSPN 1032
            VQ  EP + ++D D  D E DVDE ER            RMWKD+  + +LK+Q R      ++    S                E +RRKKM+R+QD +LKYM+K+MEVCKAQGFVYGI+PEKGKPVTG+SD+LR WWK+ V+FD+  P A++ Y   A   +   NE ++      H L ELQDTTLGSLLSALMQHC PPQRRFPL KG++PPWWP G + WW + G A  + G PPYRK  + +   KV VL AVIK MSPN
Sbjct:    4 VQDLEPLSPIQDYDEDDLEEDVDEFERFGEEISYDDLKKRMWKDRNLMCKLKQQKRDNLNSVISSPSSSTSASSSSSSSVIVRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNAVSDYLTLAAAQLISSNESLDP-NSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTELWWGEQGAAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPN 268          
The following BLAST results are available for this feature:
BLAST of DY262697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
EIN3_ARATH1.101e-11870.23Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH2.458e-11066.45ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
EIL3_ARATH4.678e-7757.42ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidops... [more]
EIL4_ARATH2.486e-7054.96Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=... [more]
EIL2_ARATH1.412e-6553.85ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidops... [more]
EIL5_ARATH5.021e-6350.38ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100CG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262697 ID=DY262697; Name=DY262697; organism=Citrus clementina; type=EST; length=1333bp
CTTCTCTCTCTCTCTCTCTCTCTCTTTCTATTGACTTCTGAGTTGCTGCC
CAAGACCCGTCTCTTCCGTTCTGGTAAAAAGGGTTGCGATACTTGGGCAA
CTTTGAAGTTTTGATACAGTTGTTGCTCATAGATAGTCAAGAGAAGGAGG
TGGTTTTATTGCTTGACGTTTTTTTTGGTTGGAGTCCTATTAGATTAGCG
AGAGACTTGCAAATTTGGGGTTTCTGTGGGTGTTAACGCTGTGGGAATGA
TGATGAGTTTTGATGAGATGGGGTTTTGTGGTGACATGAACTTCTTCTCT
GCTCCTCTGGGAGATGCAGATATGGCCGTCCAACCATCTGAACCGGAGGC
TACCGTGGAGGATGATTATACTGATGAAGAGATGGATGTTGATGAGCTTG
AGAGGAGGATGTGGAAGGACAAAATGCGTCTCAAACGGCTGAAAGAACAA
AGCAGGGGCAAGGAGGGAATTGACATGGCCAAGCAACGTCAGTCGCAAGA
GCAGGCAAGGAGGAAGAAGATGTCGAGGGCTCAAGATGGGATCTTGAAAT
ACATGTTAAAAATGATGGAAGTTTGTAAAGCTCAAGGTTTTGTCTATGGG
ATTATTCCAGAGAAAGGAAAGCCTGTGACTGGGGCATCTGACAATCTCCG
TGAGTGGTGGAAGGATAAGGTTAGGTTTGATCGTAATGGTCCAGCTGCTA
TAGCTAAGTACCAAGCTGATAATTCAGTCCCTGGCAAGAATGAGGGCATT
AACGCAATTGGTCCAACCCCGCATACCTTGCAAGAGTTGCAAGACACCAC
CCTTGGTTCACTCTTGTCGGCTCTCATGCAGCACTGTGATCCTCCTCAGA
GGCGGTTTCCCCTGNAGAAGGGTGTTTCCCCCCCATGGTGGCCCACTGGA
AAAAAAGAATGGTGGGCGCAATTGGGTTTTGCCAGGGATCAAGGTGCTCC
ACCTTACAGAAAGCACATGAACTAAAAAGGGGATGGAAAGGTGGTTGTGT
TGACGGCAGTGATCAAACTTATGTCCCCCAATTTTGGCCAAAATTCTAAA
GCTTGGGGAGGCAATTAAAATGCCTGCAAGAAAAGAGGACAGCCAAGGAA
AGTGCCCAATGGCTGGGCCATCTTCAATTAGGAAGAAGGCTTGGGTTCGA
AAAATTTAATCCCAAAATCTTGGCAGTGGTTTTTCCCTTCTTTGCGAGAA
AAGGTGGTATTTTTTTTTCTTTTAAGGTAGGTTCCAATGAAGAAAAAAAG
TGTGGGGGAAGGGGGGGCGGGAAAAAAAAAAAAACCCAAAACTTTTTTTA
GTATGTTGGCAAAAAAAAAATTGTATAAAACCC
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