DY262704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_MOUSE (Coiled-coil domain-containing protein 55 OS=Mus musculus GN=Ccdc55 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 8.947e-24 Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 2 Query: 299 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFN-LHKNVAFGGGNKDSMNLDKKAEVTNPEKKGRQKGPTKKARERGNTRSCLNTR 886 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E+ F DKE FVT AYKKKLEE+ + + DVTK+ D+S FY + L++ V K S ++A E+K R + R +SC+ R Sbjct: 40 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGFYRHLLNQAVGEEAAPKSSF---REARTVIKEEKLRGYPDETNSESRPPQQSCVLQR 235
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_BOVIN (Coiled-coil domain-containing protein 55 OS=Bos taurus GN=CCDC55 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.993e-23 Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 2 Query: 299 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNL-DKKAEVTNPEKKGRQKGPTKKAR 850 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL+E+ + + R DVTK+ D+S FY +L N A G + + + ++E+ + KG + ++R Sbjct: 42 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGFYRHL-LNQAVGEEEVPTCSFREARSEIKEEKSKGYSDEVSSESR 227
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_RAT (Coiled-coil domain-containing protein 55 OS=Rattus norvegicus GN=Ccdc55 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.400e-23 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 299 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 733 V + R+A K +A+++ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKLEE+ + + R DVTK+ D+S FY +L Sbjct: 40 VSESLQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEARLDVTKQKDLSGFYRHL 186
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_HUMAN (Coiled-coil domain-containing protein 55 OS=Homo sapiens GN=CCDC55 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.878e-22 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 299 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKL----EEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 733 V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL EE++R R AL DVTK+ D+S FY +L Sbjct: 41 VSESLQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACL----DVTKQKDLSGFYRHL 187
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_DANRE (Coiled-coil domain-containing protein 55 OS=Danio rerio GN=ccdc55 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 8.374e-22 Identity = 60/184 (32.61%), Postives = 99/184 (53.80%), Query Frame = 2 Query: 311 ISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVR--RKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTNPEKKGRQKGPTKKARER 856 + ++AIK + +K+ + +KAL ED V++YD YD+++++ + +K+ D +PKYI++L+ +ERK+E + ERK+ KER E FADKE FVT AY++KL+E+Q + + DV K+ D+S FY + N G + + + T+ R P A R Sbjct: 43 LQKEAIKKKMMKQTRLEMQKALEEDSTVYEYDNVYDDIQKQRLESNKKLLGGEDKKPKYINQLLRAVEERKKEQERRDERKIQKEREAEGEKFADKEAFVTSAYRQKLKERQEELEREKREAELEAALDVKKQKDLSGFYRHF-LNQTVGEEVVPDRSAQSEEKATSSAAAERSPSPESTANRR 225
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_CAEBR (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis briggsae GN=ccdc-55 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.921e-14 Identity = 48/126 (38.10%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 335 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKK 703 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ KER KE F DKE FVTGAY+K+ EE +++ ++A ++ V K+ Sbjct: 51 RIQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNKESKYAEAIIKAHARRQLEQFSREERQQIKEREKEAGEFDDKEVFVTGAYRKQQEEVKKYREQEAEEAAFNDMTSVQKQ 176
BLAST of DY262704 vs. ExPASy Swiss-Prot
Match: CCD55_CAEEL (Coiled-coil domain-containing protein 55 homolog OS=Caenorhabditis elegans GN=ccdc-55 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.394e-14 Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 335 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEE----QQRWAREQALRDLRDERDDVTKKTDVSDFYFN--LHKNVAFGGGNKDSMNLDKKA---EVTNPEKKGRQKGPTKKARE 853 R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I R+ E ER+ +ER KE F DKE FVTGAY+K+ EE +++ A E A D+ + + + N A K+ N+ K+ E +P+ + K P +K ++ Sbjct: 51 RVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAHARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRKQQEEVKKHREQEAEEAAFNDMTSVQKQKLWEIGMGRTLLNDLARDPTAIKQRKKEQKNVRKREDSDEEIDPKPEKSDKKPAEKLKK 235 The following BLAST results are available for this feature:
BLAST of DY262704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262704 ID=DY262704; Name=DY262704; organism=Citrus clementina; type=EST; length=1205bpback to top |