DY262707

Overview
NameDY262707
Unique NameDY262707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1293
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.935e-36
Identity = 76/110 (69.09%), Postives = 86/110 (78.18%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFG--------GKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            M  +LMNL S CF+PFG H  D  ++ +G G G        GK+GLLWFRDLGKY  GDFSMAV+QANQVLEDQSQ+ESG FGTFVGVYDGHGGP+AARYVCDHLF HF+
Sbjct:    1 MSGSLMNLFSLCFKPFG-HVCDNSEAGSGGGGGVSGGTGGEGKDGLLWFRDLGKYCGGDFSMAVIQANQVLEDQSQVESGNFGTFVGVYDGHGGPEAARYVCDHLFNHFR 109          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.697e-26
Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIE--------SGPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            ML  LMN L++C  P    S+ +  S + +G G +EGLLWFRD G++  GDFSMAVVQAN +LEDQSQ+E        SGPFGTFVGVYDGHGGP+ +R++ DH+F H +
Sbjct:    1 MLSGLMNFLNACLWP---RSDQQARSASDSG-GRQEGLLWFRDSGQHVFGDFSMAVVQANSLLEDQSQLESGSLSSHDSGPFGTFVGVYDGHGGPETSRFINDHMFHHLK 106          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C25_ORYSJ (Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.785e-25
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNG-NGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDAARYVCDHLFPH 347
            M   L+ + S+C  P  R++  R D   G NG G  +GLLW RDLG++ +G+FS AVVQAN+ LED SQ+E+G   TFVGVYDGHGG DAAR++ DHLF H
Sbjct:    1 MFSWLLRIASACLGPARRYARTRKDEDGGDNGGGVADGLLWSRDLGRHAAGEFSFAVVQANEALEDHSQVETGSAATFVGVYDGHGGADAARFISDHLFAH 101          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.366e-24
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIE--------SGPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            M+  LMNLL +C+RP    S ++      +  G ++GLLW++D G++ +G+FSMAVVQAN +LEDQ QIE        SGP+GTFVGVYDGHGGP+ A Y+ DHLF H +
Sbjct:    1 MIVTLMNLLRACWRP----SSNQHARAGSDVAGRQDGLLWYKDTGQHVNGEFSMAVVQANNLLEDQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFHHLK 106          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.279e-23
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIE--------SGPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            ML  LM LLS+C  P     +      + +  G ++GLLW++D G++  G+FSMAVVQAN +LEDQSQ+E        SGP+GTF+G+YDGHGGP+ +R+V DHLF H +
Sbjct:    1 MLSTLMKLLSACLWPSSSSGK------SSDSTGKQDGLLWYKDFGQHLVGEFSMAVVQANNLLEDQSQVESGPLSTLDSGPYGTFIGIYDGHGGPETSRFVNDHLFQHLK 104          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.412e-22
Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIE---------SGPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            ML    N L+SC  P    S         +  G ++GLLW++D   +  GDFSMAVVQAN +LEDQSQ+E         SGP+GTFVGVYDGHGGP+ +R+V DHLF H +
Sbjct:    1 MLSLFFNFLTSCLWP----SSSTTSHTYSDSKGKQDGLLWYKDSAHHLFGDFSMAVVQANNLLEDQSQVESGPLTTLSSSGPYGTFVGVYDGHGGPETSRFVNDHLFHHLK 107          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.412e-22
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIESGPF--------GTFVGVYDGHGGPDAARYVCDHLFPHFQG 356
            ML A M  L SC+ P    S         +  G ++GLLW++D G+  +G+FSMAVVQAN +LED SQ+ESGP         GT VGVYDGHGGP+ ARY+ DHLF H +G
Sbjct:    1 MLSAAMEYLRSCWGPAS--SPAGRPRKGSDAAGRQDGLLWYKDAGQLVAGEFSMAVVQANNLLEDHSQVESGPLSTTDPNLQGTLVGVYDGHGGPETARYINDHLFNHLRG 109          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.197e-21
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHSEDRVDSVNGNGFGGKE-GLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIES--------GPFGTFVGVYDGHGGPDAARYVCDHLFPHFQ 353
            ML A+M+   SC+ P           V G+   G++ GLLW++D G+  +G+FSMAVVQAN +LEDQSQ+ES        GP GTF+GVYDGHGGP+ AR++ DH+F H +
Sbjct:    1 MLAAVMDYFRSCWGPRSPAGH----RVRGSDVAGRQDGLLWYKDAGQLVTGEFSMAVVQANNLLEDQSQVESGALSMAEPGPQGTFIGVYDGHGGPETARFINDHMFHHLR 107          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C68_ARATH (Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.667e-21
Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 3
Query:   48 MLHALMNLLSSCFRPFGRHS-----EDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDAARYVCDHLFPH 347
            M   L  +   C RP  R+      +D  D  +G+     + LLW R+L ++  GDFS+AVVQAN+V+ED SQ+E+G    FVGVYDGHGGP+A+RY+ DHLF H
Sbjct:    1 MFSWLARMALFCLRPMRRYGRMNRDDDDDDDHDGDSSSSGDSLLWSRELERHSFGDFSIAVVQANEVIEDHSQVETGNGAVFVGVYDGHGGPEASRYISDHLFSH 105          
BLAST of DY262707 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.549e-21
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 3
Query:   69 LLSSCFRPFGRHSEDRVDSVNGNGFGGKEGLLWFRDLGKYGSGDFSMAVVQANQVLEDQSQIESGPF--------GTFVGVYDGHGGPDAARYVCDHLF 341
            ++S C+RPFG   +    S + NG    +GLLW++D G + +G+FSMAVVQAN +LED SQ+ESGP          TFVGVYDGHGGP+AAR+V D LF
Sbjct:    9 IVSPCWRPFGIGEDSSPGSDDTNG--RLDGLLWYKDSGNHITGEFSMAVVQANNLLEDHSQLESGPISLHESGPEATFVGVYDGHGGPEAARFVNDRLF 105          
The following BLAST results are available for this feature:
BLAST of DY262707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C42_ARATH2.935e-3669.09Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]
P2C64_ARATH4.697e-2655.45Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
P2C25_ORYSJ1.785e-2555.45Probable protein phosphatase 2C 25 OS=Oryza sativa... [more]
P2C60_ORYSJ3.366e-2451.82Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C46_ARATH1.279e-2349.09Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]
P2C79_ARATH2.412e-2249.55Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C72_ORYSJ2.412e-2250.45Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]
P2C28_ORYSJ1.197e-2148.65Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
P2C68_ARATH2.667e-2147.62Probable protein phosphatase 2C 68 OS=Arabidopsis ... [more]
P2C48_ARATH4.549e-2153.54Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100CH04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262707 ID=DY262707; Name=DY262707; organism=Citrus clementina; type=EST; length=1293bp
TGCTGATTCGATTCAAGGGGGATAAGTGTTTTTGTGAGCGATGTGGGATG
CTCCATGCATTGATGAACCTACTGTCTTCGTGTTTCAGGCCTTTCGGGCG
ACATAGTGAGGACCGAGTTGACTCAGTCAACGGTAACGGGTTTGGCGGGA
AAGAGGGTCTGCTTTGGTTTAGAGATTTGGGGAAGTATGGGTCTGGTGAC
TTTTCAATGGCGGTTGTTCAAGCGAATCAAGTTCTTGAAGATCAGAGCCA
GATTGAAAGCGGCCCTTTTGGCACTTTTGTTGGCGTTTATGATGGACACG
GCGGGCCCGACGCGGCCCGCTACGTTTGTGATCACTTGTTTCCGCACTTT
CAAGGTCAGCGTTTAGTTTATTTTCGAATATTGCGGCAATTGGGAGAGGA
AAAAAAAATGATTGCTTAGCTATGTTAGTTGTTTTGTTTGTAGTGATCCT
ATTTTGTGGTTTTTGATTAGCCACGTTTGTAAGGTTGTCAAAGTTTTGAT
TTTGATTTTGATTTCGATTTGGGTGACCTGTGCAAGTTTGGATTGCGAAG
CTCTTACAGTTGAGACTCCACGCACTGTTTAGTTATTGCATGATCACATT
GCTTGCTTTTCTTAACTGACGATGTCAAATTTTGAGTTCTAAAAATGCCA
TTTGTACCATGAAAATTCTCAAGAGGAGAAACCCAATATGATGCAATTGT
TTAGATGGCAAAATCAAATTATTGGATTCAGAGATACCGTTTTGGTTCCT
TGGTTAATTTTATGTTGAGATAACAAGGAAGTACTTCTCTAGTAATTTGC
AAACAATGCTTTAAAGAATTGGGTCAGTTGTAAAAACTAAAATTTTGGTT
GAAATTAGCGGTTTTGATACTTTGAACACCTTTCAGGGTATTGAATTTTT
TTTTAAACCCTTTGTTTTTAGTGGATATTTGGTCTTGAATCTTCTGGGTT
TTTTTTATTGAAACTTGGAAGAAGAAACCCTTTTTATGGGCTTGCTTAGG
CTTTGTGTTTAGCCAACCAAACCGCCCGAAACCCCGGGAATTGTAAACAG
AAAAAACCCTTTGAAAAAATTTTCCCCTCTAAGGAGGGAGGGCCTTTTCG
CCCCCGGGAAACAAAATTTAGGATAATCCCCCCCCCAATAAGCACCGATT
GGGGGCTAGCGGTTCTTGGTGGGGCTGAAATTTCCCGGCAACAATTGTGT
TTGGGGGAAACAACTTTGGGAAAATTCCCCCTGTTTTTTTTTTGGGGCAA
AAAAAAATGTTGACAACACCAGGTGGGGGAGAAACACGGCGCC
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