DY262709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 9.550e-32 Identity = 90/221 (40.72%), Postives = 123/221 (55.66%), Query Frame = 1 Query: 454 PVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFL-------PPNAF*SFVTCYNNA*SCSQSSSFRKPYVS-GKAFFPTDLGP-----MGHLGDDV*KLAWNFFQVLPPPQKGAS 1077 PVRPG GT+G+K +VRANHF+VQ+A+RD++HYDVSI+ EV SK +NR ++ L+ Y ++LGG+ PAYDG K++YTAGPLPF+SKEF++NL G++ FKV ++ + DLY LQQFL P + + S YVS G++FF T LG G LGD + + +FQ L Q G S Sbjct: 148 PVRPGRGTLGKKVMVRANHFLVQVADRDLYHYDVSINP----------EVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNL----AEKRADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPS--------NDYVSVGRSFFHTSLGKDARDGRGELGDGI-EYWRGYFQSLRLTQMGLS 345
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 6.190e-31 Identity = 86/221 (38.91%), Postives = 119/221 (53.85%), Query Frame = 1 Query: 439 QELRLPVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFL-------PPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 + +R P+RPG GT+G +C+V+ANHF L +D+HHYDVSI EVTS+ +NR +I L+NLY + LGGR+PAYDG K++YTAGPLPF S+EF I L R+ F+VVI+ A+ DL+ L+ FL P A S + P+ G++FF LG LG+ + +W F+Q + P Q G S Sbjct: 139 KSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSITP----------EVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDDGSGSER---RQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYA-----PF--GRSFFSPYLGRRQPLGEGL--ESWRGFYQSIRPTQMGLS 337
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.801e-30 Identity = 79/211 (37.44%), Postives = 116/211 (54.98%), Query Frame = 1 Query: 448 RLPVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 + P+RPG G G++C+V+ANHF +L ++D+HHYDV+I EVTS+ +NR ++ L++ Y ++LG R+PAYDG K++YTAGPLPF SKEF INL RE +FKVVI+L + DL+ L FL + + + G++F+ D+G LGD + +W F+Q + P Q G S Sbjct: 178 KFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITP----------EVTSRGVNRAVMKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDEEVGAGGQR---REREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRYIPVGRSFYSPDIGKKQSLGDGL--ESWRGFYQSIRPTQMGLS 373
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 6.844e-30 Identity = 92/264 (34.85%), Postives = 136/264 (51.52%), Query Frame = 1 Query: 454 PVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFL------PPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGASP*KIMVSAPLPL*TQFLIMGNLFQYIGEQP*TVFSFFIQFPSLKGGKKP 1224 P RPG G G+K ++RANHF+V +A+ ++ HYDVSI+ E S+ NR++++ LI L+G T+LGG++PAYDG K++YTAG LPFES+EF++ L E ++K+ IR+A DLY LQQFL P + +S S+ VS ++FF T G G +G+ + W ++Q L P Q G S I +SA T F +P TV F +F +++ +P Sbjct: 200 PARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINP----------ESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKER----AEREYKITIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVV-----LRESPSWNYVTVS-RSFFSTQFGHRGDIGEGL--ECWRGYYQSLRPTQMGLSL-NIDISA-----TSFF-----------KPVTVIQFVEEFLNIRDTSRP 424
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.397e-29 Identity = 75/207 (36.23%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 460 RPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 RPG GTVG +CVV+ANHF+ +L ++D+ YDV I EV+S+ +NR I+S L+ LY ++LGGR+PAYDG KN+YTAG LPF+++EF++ L RE +++V I+ A+ DL+ L+QF+ + + + R+ G++F+ D+ LGD + +W F+Q + P Q G S Sbjct: 127 RPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITP----------EVSSRSVNRAIMSELVRLYHDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPP---REREYRVAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKPQRLGDGL--QSWCGFYQSIRPTQMGLS 318
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 1.291e-28 Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 439 QELRLPVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINL-XXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 + +R P+RPG GT G +C+V+ANHF +L ++D+H YDVSI EVTS+ +NR ++ L+ LY ++LGGR+PAYDG K++YTAGPLPF S+ F I L RE F+VVI+ A+ DL+ L FL + + + G++F+ +LG LG+ + +W F+Q + P Q G S Sbjct: 240 KSVRFPLRPGKGTYGDRCIVKANHFFAELPDKDLHQYDVSITP----------EVTSRGVNRAVMFELVTLYRYSHLGGRLPAYDGRKSLYTAGPLPFASRTFEITLQDEEDSLGGGQGTQRRERLFRVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTTRYSPVGRSFYSPNLGRRQQLGEGL--ESWRGFYQSIRPTQMGLS 442
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.875e-28 Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 439 QELRLPVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 + + P RPG G++G +C+V+ANHF QL ++D+H YDVSI E+TS+ +R ++ L+ L+ ++ LGGR+PAYDG K++YTAGPLPF SKEF I+L R+ + VVI+ A+ DL+ L+QFL + + + G++FF DLG LG+ + W F+Q + P Q G S Sbjct: 167 KSFKFPHRPGSGSIGTRCLVKANHFFAQLPDKDLHQYDVSITP----------ELTSRIRSRAVMEELVRLHKMSYLGGRLPAYDGRKSLYTAGPLPFTSKEFRISLLEEDDGSGSER---RQKTYNVVIKFAARADLHRLEQFLAGRQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGRRRSLGEGL--ETWRGFYQSIRPTQMGLS 365
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.093e-27 Identity = 84/218 (38.53%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 454 PVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQF-------LPPNAF*SFVTCYNNA*SCSQSSSFR-KPYVS-GKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 P RP +GT+GR+C VRANHF+VQ+A++DI+HYDV I E T ++ NR II+ L+ L+ L GR+P YDG K+IYTAGPLPF++K+F++ RE ++KV I+ AS DLY+L+QF LP + + C S +F YVS ++FF G G +G W ++Q L P Q G S Sbjct: 194 PARPDVGTIGRRCRVRANHFLVQVADKDIYHYDVVIT----------PESTYRERNRSIINKLVALH-KQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVK------HINPLRGNQREEEYKVTIKQASKTDLYSLKQFLVGRQRELPQDTIQALDIALR---ECPTSVNFTCDRYVSISRSFFSQSFGHGGEIGSGT--ECWRGYYQSLRPTQMGLS 389
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.061e-26 Identity = 74/215 (34.42%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 439 QELRLPVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEF-IINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGAS 1077 + +R P+RPG GT G +C+V+ANHF +L ++D+H YDVSI EV S+ +NR +I ++ Y ++LGGR+P YDG K++YTAGPLPF S+ F +I RE FKVVI+ A+ DL+ L FL + + + ++F+ +LG LG+ + +W F+Q + P Q G S Sbjct: 203 KSVRFPMRPGKGTFGDRCIVKANHFFAELPDKDLHQYDVSITP----------EVPSRGVNRAVIGEIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVILQDEEESLAVGQGAQRRERPFKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTARYSPVARSFYSPNLGRRQQLGEGL--ESWRGFYQSIRPTQMGLS 405
BLAST of DY262709 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 5.076e-25 Identity = 77/223 (34.53%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 460 RPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQIISHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLXXXXXXXXXXXXXGREGQFKVVIRLASMPDLYTLQQFLPPNAF*SFVTCYNNA*SCSQSSSFRKPYVSGKAFFPTDLGPMGHLGDDV*KLAW-NFFQVLPPPQKGASP*KIMVSA----PLPL 1113 RPG GT+G KC+V+ANHF+ L +D++ YDV+I EV+SK +NR II+ L+ LY ++LG R+PAYDG K++YTAG LPF KEF + + RE +KV I+ + +++ L +FL + S ++ G++FF D+ LG+ + +W F+Q + P Q G S M SA PLP+ Sbjct: 131 RPGFGTLGTKCIVKANHFLADLPTKDLNQYDVTITP----------EVSSKSVNRAIIAELVRLYKESDLGRRLPAYDGRKSLYTAGELPFTWKEFSVKIVDEDDGIINGPK--RERSYKVAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKRFCPVGRSFFSPDIKTPQRLGEGL--ESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPV 339 The following BLAST results are available for this feature:
BLAST of DY262709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262709 ID=DY262709; Name=DY262709; organism=Citrus clementina; type=EST; length=1270bpback to top |