DY262723

Overview
NameDY262723
Unique NameDY262723
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262723_ssr147 microsatellite DY262723_ssr147:147..158. BLAST: Citrus ESTs to Prunus persica proteins V1
DY262723_ssr428 microsatellite DY262723_ssr428:428..442. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY262723 vs. ExPASy Swiss-Prot
Match: ZN207_HUMAN (Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.983e-29
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 3 
Query:  177 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 401
            WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
[Close]
BLAST of DY262723 vs. ExPASy Swiss-Prot
Match: ZN207_PONAB (Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.646e-29
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 3 
Query:  177 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 401
            WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
The following BLAST results are available for this feature:
BLAST of DY262723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZN207_HUMAN2.983e-2970.67Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 ... [more]
ZN207_PONAB6.646e-2970.67Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262723 ID=DY262723; Name=DY262723; organism=Citrus clementina; type=EST; length=1155bp
CTCAGATCAGAGAAACCGAGCAGAGAACGAGAGAGGGGAGAAACAGTAGG
AAACCCTAATAAATCAATCGAGCGAGAACGAGAGTGATTTTGATAATTTT
TTTTTTAAAGGCAAATAGAGAGAAACAGGGAAGGGCAAAGATGGGAAAGA
AGAAGAAGAGAGTATCGTCGAAGGTTTGGTGCTATTACTGCGACAGGGAA
TTCGATGACGAAAAGATTTTAGTACAACATCAGAAAGCTAAGCACTTCAA
GTGCCACGTGTGCCACAAGAAGCTCTCCACCGCCGGCGGCATGGCCATTC
ACGTCCTTCAGGTTCACAAAGAGAATGTCACCAAAGTACCTAATGCAAAA
CCAGGTCGAGAATCGACTGACATTGAAATTTATGGAATGCAAGGAATACC
ACCTGATGTCTTAGCTGCTCATTATGGAGAAGAAGAAGAAGAAGTTCCAT
CTAAAATGGCCAAAGTGGATACTTCTTTCCCACAGCTGGTAGGTGGGGTG
GTCCCAGGACAATTGGGTGTCAGCTATCCTCCTCAATCAACTTTAGGCAT
GATGCAGCCAATTTATAGTTCTGCAGTTCCCGTGCCTCCTGCTGGTTGGC
CAGTGCCTCCTCGTCCTCAACCCTGGTACCCACAGCATGCAGCAGTTTCA
ATTCCCCCACCCGCTGCTGTGGGTTATGCTCAACAGCCTTTATTTCCTGT
GCAAAATGTGAGGCCCCCTCTGGCATCGTCTACGTCACCTGCACTCCAAC
CTTCTCCAGTAGTTCCTCCTGGAATGCCCTCGTCTACACCTCCTGTTACC
GTATCCCAACCCTTGTTTCCTGTGGTGAATAACAATACGACTAGTCAAAG
TTCCCTATTTTCGGCTCCTATTCCCTCAACAAGTATTGCACTGAGCTCTT
CAGCAGAAATAAAGGGGTCAGTTGATGCCCAATCAAGTGCTAACACATCT
GTGAACAACAGCTACCATGTCCCAAGCATGGCAAGTGGGAACTTTATCAA
TTTCCCATCTTATGCCTTCGGCCCAAATACTGGGTGGGGCCTTCTCTGGA
ACCCCCCCCTGGAATTTGAAAAAAAAGCCCCCGGCAACCCCCCCCCCCTG
GTTAAAGAAAATCATTTTTTTTTTTGGGAGGAAAGAAAAAAATTTTCCCG
GGGGG
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