DY262773

Overview
NameDY262773
Unique NameDY262773
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1270
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262773 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 8.012e-101
Identity = 165/284 (58.10%), Postives = 201/284 (70.77%), Query Frame = 3
Query:  102 KVKITSKTHVKPSK-VIGRRECQLVTFDLPYLFFYYNQKLLLYRNG---DREF----HDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXXX---LTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKDGMVIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPFLERTKSRNTRVKLDPSLPPDPHSQSSGDAAAK---QEPVLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVPM 911
            K+KI SKTHVKP+K V+G+++  L TFDLPYL FYYNQK LLY+     D E     ++ VE LKDGL  VLE+FYQLAGKL KD+EGVFRVEY                        LTAE+GT  FKEL+PY G+LNLEG  RPLLA+Q+TKLKDG+ +G AFNHA+LDGTSTWHFMSSWA+ C GA S+S  PFL+R+K+R+TRVKLD + P DP+  S+G+ AA    + P L EK+F+FS+ A+  IKS+ N   PSD SKPFSTFQSL  HIWRHV +
Sbjct:    2 KIKIMSKTHVKPTKPVLGKKQFHLTTFDLPYLAFYYNQKFLLYKFQNLLDLEEPTFQNEVVENLKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAEDGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDRSKARDTRVKLDLTAPKDPNETSNGEDAANPTVEPPQLVEKIFRFSDFAVHTIKSRANSVIPSDSSKPFSTFQSLTSHIWRHVTL 285          

HSP 2 Score: 78.1814 bits (191), Expect = 8.012e-101
Identity = 40/74 (54.05%), Postives = 46/74 (62.16%), Query Frame = 2
Query:  905 THARSLKPEDYTVFTVFARCRKRVDPPMPESNFGT*IKPSSRVTAAGLLTGNPPNLGAPINQKVLKPPPAKAFD 1126
            T AR LKPED T+FTVFA CR+RVDPPMPE  FG  I+     TAAGLL  + P  GA + QK +    A   D
Sbjct:  284 TLARGLKPEDITIFTVFADCRRRVDPPMPEEYFGNLIQAIFTGTAAGLLAAHGPEFGASVIQKAIAAHDASVID 357          
BLAST of DY262773 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 5.235e-22
Identity = 76/284 (26.76%), Postives = 131/284 (46.13%), Query Frame = 3
Query:   87 MAEITKVKITSKTHVKPSKVI--GRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGK-----DEEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKDGMVIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPFLERTKSRNTRVKLDPSLPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSKVN-ENGPSDGSKPFSTFQSLAVHIWRHVPMH 914
            MA++T +   S + V+P  +   GR +  L  FDL  L+  Y Q+ LL+   D E H  + +L+  L   L+ ++  AG+L K     DE   F +                                F+   P  GV +++G   PLLALQ+T+++DG+ IG  +NH + DG S W+F  +W++ C+     ++ P   +    +    +D  +        +   + +  P  +E+VF F++  I  +K+KVN E G  D     S+ Q+++ H+WR +  H
Sbjct:    1 MADVTFI---SSSIVRPQIINQEGREKIHLTPFDLNLLYVDYTQRGLLFPKPDPETH-FISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVD---GMDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAKVNGEIGLRD--HKVSSLQAVSAHMWRSIIRH 275          
The following BLAST results are available for this feature:
BLAST of DY262773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DCR_ARATH8.012e-10158.10BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
Y3028_ARATH5.235e-2226.76Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DF06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262773 ID=DY262773; Name=DY262773; organism=Citrus clementina; type=EST; length=1270bp
CTCCTGAACATATCATCTCTTCTATTAGTTCATCCAACAAAAACAAATCA
AAAGTGCTTTTGACAATCAGAACCCTAATATTAGAAATGGCAGAGATAAC
AAAGGTGAAGATTACAAGCAAAACCCATGTGAAGCCGAGCAAAGTGATAG
GAAGAAGAGAGTGTCAGCTGGTGACTTTTGATCTGCCGTATCTGTTTTTT
TATTACAACCAGAAGCTGTTGTTGTATAGAAACGGGGACCGTGAGTTTCA
CGACGCTGTCGAGAAACTCAAAGATGGGCTTAAGCATGTGTTGGAGGAGT
TTTATCAGCTGGCTGGGAAGCTGGGGAAAGATGAAGAAGGTGTCTTTAGG
GTTGAGTATGATGATGACATGGACGGCGTCGAGGTGGCCGAGGCCGTCGC
TGATGAGATCGCCGTCGATGATCTGACGGCTGAGGAAGGCACCAAGAGTT
TCAAGGAGTTGATTCCCTATTATGGAGTCCTGAATTTGGAGGGGACTCAT
CGGCCTTTGTTGGCTCTTCAGTTGACCAAGCTGAAAGACGGAATGGTAAT
TGGATGCGCGTTCAATCACGCGATCCTAGACGGCACCTCCACGTGGCACT
TCATGAGCTCATGGGCCCAGGCGTGCAACGGGGCCACCTCGGTCTCGGTC
CCACCTTTCCTGGAGCGCACAAAATCCCGCAACACGCGCGTGAAGCTCGA
CCCCTCACTCCCCCCGGACCCACACTCCCAATCCAGCGGCGACGCTGCTG
CCAAGCAGGAACCGGTGCTAAGAGAGAAAGTCTTTAAATTCTCCGAAGCG
GCCATCGACAAGATCAAGTCAAAAGTCAACGAAAACGGGCCATCGGACGG
TTCAAAACCGTTCTCAACGTTCCAATCACTAGCTGTGCATATCTGGCGCC
ATGTACCCATGCACGTAGCCTAAAACCCGAAGACTACACAGTCTTCACAG
TCTTCGCCCGATGCCGGAAACGCGTGGACCCGCCGATGCCGGAAAGTAAC
TTCGGGACCTAAATCAAGCCTTCTTCCCGGGTGACGGCGGCGGGGCTATT
AACGGGAAATCCACCGAATTTGGGAGCGCCAATAAACCAAAAGGTATTAA
AACCCCCACCCGCTAAGGCCTTTGACAAAACCAAAGGAGGGGGGGGGAAA
ACCCCCCCAAAAATTTTTTAGTTTCAGGAACCCCGGGGGTTAACCTGCGG
GGGGGGGGGGGGGGACTCCCCCCAGAGATTTAAGGGTGTTTTAAGAGGTG
TATTATTTTGGGGGGGGGGG
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