DY262774

Overview
NameDY262774
Unique NameDY262774
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1180
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262774 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 374.015 bits (959), Expect = 9.357e-103
Identity = 193/381 (50.66%), Postives = 254/381 (66.67%), Query Frame = 3
Query:    3 WVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIR-GGGASFGVVLAYKINIVPVPETVTVFKVEKTLEQDATDAVDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGEKTVRATFIALFLGGSERLLTITDEGFPELGLTRSDCTELSWIDSVVYWGSFPAGTPA--SVLLDRTPLTLSSLKRKSDYVKEPIPREGLEGLWKKMIELERPYMNFNPYGGKMHEVSATESPFPHRAGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVVKNPRESILAYRGP*FGYQQPQV*NRATRKEKLMGLIIFWKNFNGSSKLKTRLNLKNFFQ 1136
            W+ AGA LGEV+YRI EKS+ HGFPAGVCPTVGVGGH S GGYGNM+RK+GLSVD + DAK+VDVNGR+LDR +MGEDLFWAI  GGG S+GVVL YK+ +VPVP  VTVF+VE+ ++  A D V KWQ V  K D  LF+R+++  V   TR   KTVRA+ +ALFLG ++ ++ +  + FPELGL + +C+E++W  S ++W +    T     V LDR   T S  KRKSDYV   IP++G+E L+KKMIEL +  + FNPYGGKM EV+    PFPHR   L+KIQY  NW E   +    Y++  + LY ++T FV KNPR S   YR    G         + ++ ++ G   F +NF+   K+KT ++  NFF+
Sbjct:  154 WISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRKAMGEDLFWAITGGGGGSYGVVLGYKVKLVPVPSVVTVFRVEQYMDSGAVDMVHKWQSVGPKTDPNLFMRMLIQPV---TRKKVKTVRASVVALFLGRADEVVALLSKEFPELGLKKENCSEMTWFQSALWWDNRLNATQVDPKVFLDRNLDTSSFGKRKSDYVATAIPKKGIESLFKKMIELGKIGLVFNPYGGKMAEVAVNAKPFPHR-NKLFKIQYSVNWKENSAEIEKGYLNQAKVLYSFMTGFVSKNPRSSYFNYRDVDIGVNDHGA--NSYKEGEVYGRKYFGENFDRLVKIKTAVDPGNFFR 528          
BLAST of DY262774 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 7.483e-68
Identity = 150/396 (37.88%), Postives = 215/396 (54.29%), Query Frame = 3
Query:    3 WVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGGAS-FGVVLAYKINIVPVPETVTVFKVEKTLEQD-ATDAVDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGEKTVRATFIALFLGGSERLLTITDEGFPELGLTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLS--SLKRKSDYVKEPIPREGLEGLWKKMIELERPYMNFNPYGGKMHEVSATESPFPHRAGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVVKNPRESILAYRGP*FG---YQQPQV*NRATRKEKLMGLIIFWKNFNGSSKLKTRLNLKNFFQKGKKHSYFLPP 1169
            WV++G+ LGE++Y I E S   GF AG CPTVG GGH S GG+G M RKYGL+ DN+VDA L+D NG ILDR +MGED+FWAIRGGG   +G + A+KI ++PVPE VTVF+V K +  D AT  + KWQ VA +L++       L V+  +    EK V  T +    G      +  D  FPELGL   D  E+SW +S  Y     AG      L+   L     + K K D  KEP+P +   GL +++ +    ++  N +GG+M ++S+  +PFPHR+G    ++Y+  WN+        ++D   ++Y+++ PFV KNPR   + +     G   +    V N A    +  G   F  N+    + KT ++  N F     H   +PP
Sbjct:  138 WVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEED----FTLSVLGGA---DEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYL----AGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVF----NHPQSIPP 518          
BLAST of DY262774 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 5.363e-66
Identity = 151/396 (38.13%), Postives = 213/396 (53.79%), Query Frame = 3
Query:    3 WVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRNSMGEDLFWAIRGGGAS-FGVVLAYKINIVPVPETVTVFKVEKTLE-QDATDAVDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGEKTVRATFIALFLGGSERLLTITDEGFPELGLTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLS--SLKRKSDYVKEPIPREGLEGLWKKMIELERPYMNFNPYGGKMHEVSATESPFPHRAGNLWKIQYVTNWNEEGVDAANYYIDLTRQLYDYLTPFVVKNPRESILAYRGP*FG---YQQPQV*NRATRKEKLMGLIIFWKNFNGSSKLKTRLNLKNFFQKGKKHSYFLPP 1169
            WV++GA LGE++Y IA+ + T GF AG CPTVG GGH S GG+G M RKYGL+ DN+VDA L+D NG ILDR  MG+D+FWAIRGGG   +G + A+KI ++PVPE +TVF+V K +  +DA+  + KWQ+VA +LD+  F   VL  VN +           F+ L LG  +   TI DE FPELGL   +  E+SW +S+    +F +G      L+   L     + K K D+ K  +P        + + E    ++  N +GGKM E+S   +PFPHR G     +Y+  WN++       + +   + YDYL PFV K PR   + +     G   ++       A    +  G   F  N+    K KT ++  N F     H   +PP
Sbjct:  142 WVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHISGGGFGMMSRKYGLAADNVVDAILIDSNGAILDREKMGDDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKLTVFRVTKNVGIEDASSLLHKWQYVADELDED-FTVSVLGGVNGN------DAWLMFLGLHLGRKDAAKTIIDEKFPELGLVDKEFQEMSWGESM----AFLSGLDTISELNNRFLKFDERAFKTKVDFTKVSVPLNVFRHALEMLSEQPGGFIALNGFGGKMSEISTDFTPFPHRKGTKLMFEYIIAWNQDEESKIGEFSEWLAKFYDYLEPFVSKEPRVGYVNHIDLDIGGIDWRNKSSTTNAVEIARNWGERYFSSNYERLVKAKTLIDPNNVF----NHPQSIPP 522          
BLAST of DY262774 vs. ExPASy Swiss-Prot
Match: YVDP_BACSU (Uncharacterized FAD-linked oxidoreductase yvdP OS=Bacillus subtilis GN=yvdP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.386e-13
Identity = 55/141 (39.01%), Postives = 71/141 (50.35%), Query Frame = 3
Query:    6 VQAGAILGEVFYRIAEKSKTHGF--PAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGRILDRN-SMGEDLFWAIR-GGGASFGVVLAYKINIVPVPETVTVFKVEKTLEQDATDAVDKWQHVAHKLDDGL 416
            VQ G  +G +   +A      GF  P G  PTVG+GG    GG+G + R  GL  DN++  K VD  GRI+  + S  EDL WA R GGG +FG    Y   +   P+T TVF +    EQ  T     WQ  A  +D+ L
Sbjct:  100 VQTGIPVGPLVKGLARD----GFMAPFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNIIWPWEQLET-VFKAWQKWAPFVDERL 235          
BLAST of DY262774 vs. ExPASy Swiss-Prot
Match: YGAK_BACSU (Uncharacterized FAD-linked oxidoreductase ygaK OS=Bacillus subtilis GN=ygaK PE=3 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 5.267e-13
Identity = 79/316 (25.00%), Postives = 139/316 (43.99%), Query Frame = 3
Query:    3 WVQAGAILGEVFYRIAEKSKTHGFPAGVCPTVGVGGHFSAGGYGNMMRKYGLSVDNIVDAKLVDVNGR-----ILDRNSMGEDLFWAIR-GGGASFGVVLAYKINIVPVPETVTVFKVEKTLEQDATDAVDKWQHVAHKLDDGLFIRLVLDVVNSSTRTGEKTV-RATFIALFLGG----SERLLTITDEGFPELGLTRSDCTELSWIDSVVYWGSFPAGTPASVLLDRTPLTLSSLKRKSDYVKEPIPREGLEGLWKKMIELERPYMNFNPY----GGKMHEVSATESPFPHRAGNLWKIQYVTNWNEEGVDAAN 905
            +++AGA LGEV+  + +   T   PAG    VG+ G    GG G + R  GL+ D++V  +++  + +     I    S   DLFWA + GGG +FG+V +     VP+ + V++F +    + D  +  + WQ+ A   DD L          SS     K V R   +  F+G      + L  +   G P  G+ ++      +I++V ++ S     P              +KR   ++++P+    +  + K  +E   P  N + +    GG    V+  ++ F +R   + + +Y+TNW   G    N
Sbjct:   98 YIEAGAELGEVYRTLWQYGLT--LPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQ-VSIFSITWGWD-DFEEVYNTWQNWAPYTDDRL---------TSSIEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKT----TPFIEAVTFFNSPGGNQP------------QKMKRSGSFIEKPLSERAISTI-KHFLE-HAPNQNASVWQQALGGAAGRVAPDQTAFYYRDAIIAQ-EYLTNWTSPGEKRQN 381          
The following BLAST results are available for this feature:
BLAST of DY262774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RETOL_ARATH9.357e-10350.66Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_ESCCA7.483e-6837.88Reticuline oxidase OS=Eschscholzia californica GN=... [more]
RETO_PAPSO5.363e-6638.13Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
YVDP_BACSU1.386e-1339.01Uncharacterized FAD-linked oxidoreductase yvdP OS=... [more]
YGAK_BACSU5.267e-1325.00Uncharacterized FAD-linked oxidoreductase ygaK OS=... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262774 ID=DY262774; Name=DY262774; organism=Citrus clementina; type=EST; length=1180bp
CTTGGGTTCAGGCTGGAGCAATTCTAGGTGAAGTCTTCTATCGAATAGCG
GAGAAAAGCAAAACTCATGGCTTTCCAGCAGGGGTTTGTCCTACAGTTGG
TGTTGGCGGCCACTTCAGTGCAGGAGGGTATGGAAATATGATGAGGAAAT
ATGGATTATCAGTCGATAACATTGTCGACGCAAAGCTCGTGGATGTTAAT
GGCAGAATACTCGACAGAAACTCCATGGGGGAGGATCTTTTTTGGGCTAT
CAGAGGAGGGGGAGCCAGCTTTGGAGTTGTTCTTGCTTACAAAATCAATA
TTGTTCCTGTTCCGGAAACAGTCACTGTCTTCAAGGTTGAAAAGACCTTG
GAACAAGATGCTACCGATGCTGTGGACAAATGGCAACACGTCGCCCACAA
GCTGGACGATGGTCTATTCATCAGGCTGGTGCTGGATGTTGTGAACAGCA
GTACACGGACTGGGGAAAAGACAGTGAGGGCTACGTTTATTGCCTTGTTC
CTCGGAGGGTCCGAAAGGCTACTGACAATCACTGACGAGGGATTTCCCGA
ACTAGGATTAACTCGATCCGACTGCACCGAATTGAGCTGGATTGATTCAG
TGGTTTACTGGGGCAGCTTCCCTGCAGGGACACCGGCAAGTGTGTTGCTC
GATCGAACGCCACTGACGCTGAGCTCTCTGAAGAGGAAATCAGATTATGT
GAAGGAGCCAATCCCAAGGGAAGGCCTTGAAGGGCTGTGGAAGAAGATGA
TCGAACTAGAGAGACCATACATGAACTTCAACCCTTACGGTGGCAAAATG
CATGAGGTTTCGGCAACGGAGAGTCCATTTCCGCATAGAGCTGGGAACTT
GTGGAAGATTCAGTACGTTACGAATTGGAATGAAGAAGGGGTGGATGCAG
CAAATTACTACATAGATTTGACCAGGCAGCTCTACGATTACTTGACTCCT
TTTGTGGTCAAGAACCCAAGGGAGTCCATTCTAGCTTACAGGGGACCTTG
ATTTGGGTACCAACAACCCCAAGTTTGAAACAGGGCTACTCGGAAGGAAA
AGCTTATGGGATTAATAATTTTTTGGAAAAATTTCAACGGGTCGTCAAAA
TTAAAAACAAGGTTGAATCTTAAAAACTTCTTCCAGAAAGGAAAAAAACA
TTCCTACTTCCTCCCCCCCTCTAAGGTAAT
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