DY262776

Overview
NameDY262776
Unique NameDY262776
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2355 contig Ccv1_Contig2355:1..1175. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of DY262776 vs. ExPASy Swiss-Prot
Match: CP314_DROME (Ecdysone 20-monooxygenase OS=Drosophila melanogaster GN=shd PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 8.830e-48
Identity = 86/188 (45.74%), Postives = 118/188 (62.77%), Query Frame = 2
Query:  296 PKQR------LPGPPALPLVGTRW---MFWGRYRLNKLHEAYEDMFKRYGMIFAEINSDGSPLVSIAERHALETILXXXXXXXXXXXXEIVEIYRKKRPETYASTGIVNEQGDKWYHLRRNLTAELTSPQTMQGFLPHLNIICDDFMDLLNSCRKPDG-TVHAFDHLTNRMGLESVCCLMLGARLGFL 829
            PK+R      +PGP  +P +GT+W   +F+ RY++ KLHE Y D+ ++YG I  E+     P+V +  R  LE +L            EI+ +YR+ RP+ YAS GIVNEQG  W  LR +LT+ +TSP+ +Q FLP LN +CDDF++LL + R PD   V  F+ L N MGLE+VC LMLG R+GFL
Sbjct:   52 PKRRRRGIWDIPGPKRIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEKVLKYPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALNAVCDDFIELLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGFL 239          

HSP 2 Score: 43.1282 bits (100), Expect = 8.830e-48
Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  843 PAAPTRWAAAVKMSFRAQRDSFFGPLFWKYAPTQLYREVREKRTKLFIPSYQTFLEKCKKNNKMVSSQNQRLA--RK*FLKNSFKTQDLGNKRKK 1121
            P   ++ AAAVK  F +QRDS++G   WKY PT+ YR+       ++    +    + ++  K  + ++   A  R  FL N  + +DL  + KK
Sbjct:  246 PQKISQLAAAVKQLFISQRDSYYGLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELEELKKSAACEDDEAAGLRSIFL-NILELKDLDIRDKK 339          
BLAST of DY262776 vs. ExPASy Swiss-Prot
Match: CP302_DROME (Cytochrome P450 302a1, mitochondrial OS=Drosophila melanogaster GN=dib PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 7.323e-15
Identity = 58/216 (26.85%), Postives = 104/216 (48.15%), Query Frame = 2
Query:  293 KPKQRLPGPPALPLVGTRWMFW---GRYRLNKLHEAYEDMFKRYGMIFAEINSDGSPLVSIAERHALETILXXXXXXXXXXXXEIVEIYRKKRPETYASTGIVNEQGDKWYHLRRNLTAELTSPQTMQGFLPHLNIICDDFMDLLNSCRKPDGTVHAFDHLTNRMGLESVCCLMLGARLGFL---ERTMSSRAHALGGGCQD----VIPSAKGLLL 910
            KP Q +PGP     +G  + +    G Y   +LH+A +D +++YG I  E    G  +V + +   +  +L             + + YRK RP+ Y +TG++   G +W+ +R  +  EL++P++++ F+  ++ +  +F+  L   R   G +     LT R+ LE  C L  GARL      E+   SR+  L    +     ++P+ +GL L
Sbjct:   19 KPYQAIPGPRGPFGMGNLYNYLPGIGSYSWLRLHQAGQDKYEKYGAIVRETIVPGQDIVWLYDPKDIALLLNERDCPQRRSHLALAQ-YRKSRPDVYKTTGLLPTNGPEWWRIRAQVQKELSAPKSVRNFVRQVDGVTKEFIRFLQESRN-GGAIDMLPKLT-RLNLELTCLLTFGARLQSFTAQEQDPRSRSTRLMDAAETTNSCILPTDQGLQL 231          
The following BLAST results are available for this feature:
BLAST of DY262776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CP314_DROME8.830e-4845.74Ecdysone 20-monooxygenase OS=Drosophila melanogast... [more]
CP302_DROME7.323e-1526.85Cytochrome P450 302a1, mitochondrial OS=Drosophila... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DF11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262776 ID=DY262776; Name=DY262776; organism=Citrus clementina; type=EST; length=1175bp
CGAGCCTGGTCGGGGCTAGAGCCGTGTCCCGCGCCCGCGACCTCCTGTGT
TTTGTTGGTAAACAAAACGTGTATAAATAAAAATCGAAGCGTGTTCGTAC
TGTCAGTCTTGTTGTGCAACCACACCGGTCACCATGTCTCTTCCGGGAGT
GTTCCTCTTCTCGCACTACGTCGAGAGCTTCTGGAGCGCCCCACACCCCC
TGATAGATTGGTCGAGCGTCCCGACGTTGATGCTGGCGGTGATCCTGCTG
CTAGTGATCGCCAGCGCGCTGCTCTCGCGAGCCTCTGAGGGCAAGCCAAA
GCAAAGGCTGCCCGGCCCGCCCGCGCTACCCTTGGTCGGCACCCGATGGA
TGTTCTGGGGCCGGTACAGGCTGAATAAGCTGCATGAAGCTTACGAAGAT
ATGTTCAAGCGGTACGGGATGATCTTTGCGGAGATCAACTCGGATGGCTC
GCCATTGGTGTCCATAGCAGAGCGACACGCCTTAGAAACCATTCTGAGGA
CTCCGGCGCGCCGCCCGTTCAGACCGCCCACTGAAATAGTCGAGATCTAC
AGGAAGAAACGACCTGAAACGTACGCCTCCACTGGCATTGTAAATGAACA
AGGCGACAAATGGTATCACCTGCGCAGGAACCTGACCGCGGAGCTGACAA
GTCCACAAACAATGCAAGGGTTCCTGCCGCATCTCAACATCATCTGTGAC
GACTTCATGGACTTACTGAACAGTTGCAGGAAACCAGACGGCACCGTCCA
TGCGTTTGATCACTTGACCAACAGAATGGGGCTCGAGTCTGTGTGCTGTC
TGATGCTGGGCGCCCGGCTCGGGTTCCTGGAGCGCACCATGTCCAGCCGC
GCCCACGCGCTGGGCGGCGGCTGTCAAGATGTCATTCCGAGCGCAAAGGG
ACTCCTTCTTCGGCCCCCTCTTCTGGAAATACGCGCCGACGCAACTCTAC
AGGGAAGTTCGTGAAAAGCGAACAAAACTATTCATTCCATCATATCAAAC
TTTTTTGGAAAAATGCAAGAAAAACAACAAAATGGTTTCTTCCCAAAACC
AACGGCTTGCCAGGAAATAATTTTTGAAAAATTCCTTCAAAACCCAAGAC
CTGGGAAATAAAAGGAAAAAAAAAACCTGCCATCTCAAAAACCCCTCCAC
GTTCCTGGCCTTGGAAAACCCCTGC
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