DY262780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_MOUSE (Chitinase domain-containing protein 1 OS=Mus musculus GN=Chid1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.301e-18 Identity = 60/181 (33.15%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 498 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTAYGILHDQKLRNMGL-EFIKQLGNALH 1013 + RGLV TD+ ++++ E+ S S A R + VL Y+TPWNS GY++AK+F SKFT +SPVW LK +G + + G H+ D GW+ ++K ++PR++ E + K +DG V+E WS L QK ++GL + L ALH Sbjct: 45 VQDRGLVVTDIKAEDVVLEHRSYCSSRARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVAQVAKNQHFDGFVVEVWSQ------LLSQK--HVGLIHMLTHLAEALH 217
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_RAT (Chitinase domain-containing protein 1 OS=Rattus norvegicus GN=Chid1 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 5.617e-18 Identity = 60/181 (33.15%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 498 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTAYGILHDQKLRNMGL-EFIKQLGNALH 1013 + RGLV TD+ ++++ E+ S S A R + VL Y+TPWNS GY++AK+F SKFT +SPVW LK +G + + G H+ D GW+ ++K ++PR++ E + K +DG V+E WS L QK ++GL + L ALH Sbjct: 45 VQDRGLVVTDIKAEDVVLEHRSYCSARARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRIVPRLLFEDWTYDDFRSVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWSQ------LLSQK--HVGLIHMLTHLAEALH 217
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_XENLA (Chitinase domain-containing protein 1 OS=Xenopus laevis GN=chid1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.581e-18 Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 471 TRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFP----XXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWSTWTAYGILHDQKLRNMGLEFIKQLGNALHS 1016 T+ S T + RGLV TDV ++I+ E+ S ++ R+ + VL Y+TPWN GY++AK F +KFT +S VW ++ +G + G H+ D GW+ ++RK ++PR++ + + K+ +DG V+E WS L QK + + + + +G ALHS Sbjct: 36 TKTRLSDTSVQSRGLVSTDVKAKDIVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISSVWLQIRRKGREAYQVTGLHDVDQGWIKDIRKTSKSTQIVPRILFDGWSYQDFESVFNSEDEIEELAGAMVQTAKDEHFDGFVVEVWSQ------LGGQKRQEL-VHLLIHIGEALHS 218
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_XENTR (Chitinase domain-containing protein 1 OS=Xenopus tropicalis GN=chid1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.251e-17 Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 471 TRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFP----XXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWS 926 T+ S T + RGLV TDV ++I+ E+ S ++ R+ + VL Y+TPWN GY++AK F +KFT +SPVW +K +G + G H+ D GW+ ++RK ++PR++ + + K+ +DG V+E WS Sbjct: 37 TKTRLSDTLVQTRGLVSTDVKAKDIVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISPVWLQIKRKGKEAYHITGLHDVDQGWIKDIRKTSKSTQIVPRILFDGWSYQDFESVFSSEDEIEELAGAMVQTAKDERFDGFVVEVWS 196
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_DICDI (Chitinase domain-containing protein 1 OS=Dictyostelium discoideum GN=chid1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.251e-17 Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 3 Query: 504 QRGLVKTDVNYQEILTENSKVSENASHRYYTYP-VLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLILEGRHNADAGWLLELRKGD---ALVLPRVVLEA--FPXXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWSTWTAYGILH-DQKLRNMGLEFIKQLGNALHS-GDSLKNRSNFCIWPMS*VHPIPKKSQPLNFGPGEFAKL 1130 QRGLV+ +V+ ++I+ +K +N + + L YITPWN KGY++A + KFTH+SPVW+ +K + +++EG HN D W+ ++++ + +LPR E + + K+ YDG+V+E GI+H +++LR+ F+ L LHS G + + ++P +K Q FG +F L Sbjct: 46 QRGLVRENVSAKQIINNYNKYFKNVDIKNFEQGNTLVYITPWNGKGYDVATKWAKKFTHISPVWHQVKFENNKVMIEGDHNIDKKWMEKVKENSDQKSKILPRFSFEGQQWGSKESFQKYIDPKLIDSLVSTVKKNNYDGLVIE--------GIVHINKQLRD---PFLISLSEKLHSIGKEI----------ILVIYPFRQKGQETGFGAKDFELL 241
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_PONAB (Chitinase domain-containing protein 1 OS=Pongo abelii GN=CHID1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.788e-17 Identity = 57/180 (31.67%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 498 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTAYGILHDQKLRNMGLEFIKQLGNALH 1013 + +RGLV TD+ + ++ E+ S S A R++ VL Y+TPWNS GY++ K+F SKFT +SPVW LK +G + + G H+ D GW+ +RK ++PR++ E + K +DG V+E W+ L QK + + + L ALH Sbjct: 45 VQERGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQ------LLSQKRVGL-IHMLTHLAEALH 217
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_HUMAN (Chitinase domain-containing protein 1 OS=Homo sapiens GN=CHID1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.755e-17 Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 3 Query: 498 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTAYGILHDQKLRNMGLEFIKQLGNALH 1013 + RGLV TD+ + ++ E+ S S A R++ VL Y+TPWNS GY++ K+F SKFT +SPVW LK +G + + G H+ D GW+ +RK ++PR++ E + K +DG V+E W+ L QK + + + L ALH Sbjct: 45 VQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQ------LLSQKRVGL-IHMLTHLAEALH 217
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_DANRE (Chitinase domain-containing protein 1 OS=Danio rerio GN=chid1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.968e-16 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 507 RGLVKTDVNYQEILTENSKVSENASH-RYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQG-TSLILEGRHNADAGWLLELRKGDA--LVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTECKEME----YDGIVLESWS 926 RGLV TD +++I+ E + + R + VL YITPWNS GY++AK+F K T +SPVW L+ +G S + G H+ D GW+ +RK + +LPR++ + + E E+ +DG LE WS Sbjct: 47 RGLVVTDPQWRDIVREEKRFCHQCINTRQFKGAVLGYITPWNSHGYDIAKLFGPKLTSVSPVWLQLRRRGPESFHITGLHDHDPGWVKAVRKANKKNKILPRLLFDGWSYQDYVSVLDSEDEMEELGREALEVAKAEGFDGYTLELWS 194
BLAST of DY262780 vs. ExPASy Swiss-Prot
Match: CHID1_BOVIN (Chitinase domain-containing protein 1 OS=Bos taurus GN=CHID1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.171e-15 Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 504 QRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWS 926 +RGLV TD+ ++++ E+ S S A +++ VL YITPWN GY++AK+F KFTH++PVW L+ G + + G + D GWL +RK ++PR+ E + K +DG+V+E W+ Sbjct: 47 ERGLVVTDLRAEDVVLEHRSYCSAKAHRKHFAGDVLGYITPWNRHGYDVAKIFGGKFTHVAPVWLQLRRHGREMFEVTGLDDVDQGWLRAVRKQAKGLRIVPRLRFEDWTYEDFDSVLDNEDEIEELSRTVVQVAKSQHFDGLVVEVWN 195 The following BLAST results are available for this feature:
BLAST of DY262780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262780 ID=DY262780; Name=DY262780; organism=Citrus clementina; type=EST; length=1207bpback to top |