DY262788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 2.579e-14 Identity = 62/195 (31.79%), Postives = 86/195 (44.10%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGL--CRTASFESNMMLSDMRNSPSCTCAVPGT-EPAPEC-------------NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA--------FTGTQSGVSPPEWGKNWLVVSP 1034 PLDV K RLQ+Q V E + R S + S +R++ C G EP C R+ GT+D F K+VR EG LW G A+L ++VP Y YD ++ F G A Y P+VAG++AR P++L RT++QA T ++ V+ W WL P Sbjct: 31 PLDVVKVRLQSQRPSVASELMPPSRLWSLSYAKLPSSLRSTGKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYD----QLKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELVRTKLQAQHLSYRELGTCVRAAVAQGGWRSLWLGWGP 221
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2540_HUMAN (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.399e-14 Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEP-APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 PLDV K RLQAQ +P +G C S N ++ + C C G + + ++GTLD F+K++R EG LW G +L ++VP IY CYD L+ + N +P+VAG VAR A P++L RT+MQ+ Sbjct: 35 PLDVVKIRLQAQNNPLP-KGKCFVYS---NGLMDHL-----CVCEEGGNKLWYKKPGNFQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETC----IPIVAGIVARFGAVTVISPLELIRTKMQS 171
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2539_HUMAN (Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.493e-14 Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGL--CRTASFESNMMLSDMRNSPSCTCAVPGT-EPAPEC-------------NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 PLDV K RLQ+Q + E + R S + S ++++ C G EP C R+ GT+D F K+VR EG LW G A+L ++VP IY YD ++ F G A Y P+VAG++AR P++L RT++QA Sbjct: 31 PLDVVKVRLQSQRPSMASELMPSSRLWSLSYTKLPSSLQSTGKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYD----QLKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQA 191 HSP 2 Score: 21.1718 bits (43), Expect = 5.493e-14 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 1040 RTKLLSKFQKYRNLGNGVGTNLA 1108 RTKL ++ YR LG V T +A Sbjct: 186 RTKLQAQHVSYRELGACVRTAVA 208
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2539_MOUSE (Solute carrier family 25 member 39 OS=Mus musculus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.671e-13 Identity = 61/195 (31.28%), Postives = 83/195 (42.56%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLC--RTASFESNMMLSDMRNSPSCTCAVPGT-EPAPEC-------------NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA--------FTGTQSGVSPPEWGKNWLVVSP 1034 PLDV K RLQ+Q E R S S +++ C G EP C R+ GTLD F K+VR EG LW G A+L ++VP IY YD ++ F G + Y P+VAG++AR P++L RT++QA + Q+ V+ W WL P Sbjct: 31 PLDVVKVRLQSQRPSATSELTTPSRFWSLSYTKSSSALQSPGKCLLYCNGVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYD----QLKAFLCGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQAQHVSYRELASSVQAAVTQGGWRSLWLGWGP 221
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2540_BOVIN (Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.183e-13 Identity = 53/150 (35.33%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEP-APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 P DV K RLQAQ P +G C SN ++ + C C G + + ++GTLD F K++R EG LW G +L ++VP IY CYD L+ + N +P+VAG VAR A P++L RT+MQ+ Sbjct: 35 PFDVVKIRLQAQNNPFP-KGKC---FLYSNGLMDHL-----CVCEEEGNKAWYKKPGHFQGTLDAFLKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLTALLRSKLGENESR----IPIVAGIVARLGAVTVISPLELIRTKMQS 171
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2539_RAT (Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.851e-13 Identity = 62/195 (31.79%), Postives = 83/195 (42.56%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLC--RTASFESNMMLSDMRNSPSCTCAVPGT-EPAPEC-------------NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA--------FTGTQSGVSPPEWGKNWLVVSP 1034 PLDV K RLQ+Q V E R S S +++ C G EP C R+ GTLD F K+VR EG LW G A+L ++VP IY YD ++ F G + Y P+VAG++AR P++L RT++QA Q+ V+ W WL P Sbjct: 31 PLDVVKVRLQSQRPTVASELTTPSRFWSLSYTKSPSTLQSPGKCLLYCNGVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYD----QLKAFLCGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKLQAQHVSYRELAACVQAAVAQGGWRSLWLGWGP 221
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2540_RAT (Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 2.414e-12 Identity = 53/152 (34.87%), Postives = 73/152 (48.03%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEP-APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQAFT 974 PLDV K RLQAQ P +G C SN ++ + C C + + + GTLD F K+VR EG LW G +L ++VP IY CY+ ++ N +P+VAG VAR A P++L RT+MQ+ T Sbjct: 36 PLDVVKIRLQAQNNPFP-KGKC---FLYSNGLMDHI-----CICEEESKKAWYKKPGNFHGTLDAFLKIVRNEGIKSLWSGLPPTLVMAVPATVIYFTCYEQLSTFLKTKLGENETR----IPIVAGIVARFGAVTMISPLELIRTKMQSKT 174
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2540_MOUSE (Solute carrier family 25 member 40 OS=Mus musculus GN=Slc25a40 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 9.172e-12 Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEP-APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 PLDV K RLQAQ P +G C SN ++ M C C + + ++GTLD F K++R EG LW G +L +++P IY CY+ ++ N +P+VAG VAR A P++L RT++Q+ Sbjct: 36 PLDVVKIRLQAQNNPFP-KGKC---FLYSNGLMDHM-----CVCEEESKKAWYKKPGNFRGTLDAFLKILRNEGIKSLWSGLPPTLVMAIPATVIYFTCYEQLSAFLKTKLGENETR----IPIVAGVVARFGAVTVISPLELIRTKVQS 172
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2540_DANRE (Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.564e-11 Identity = 54/152 (35.53%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 522 PLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTE---PAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 PLDV K RLQAQ P +G C N ++ + C C T+ AP + GTLD F K++R EG LW G +L ++VP IY CYD L++ G+ L PL AG++AR + P++L RT+MQ+ Sbjct: 36 PLDVVKIRLQAQKNPFP-KGKCFVYC---NGLMDHI-----CVCENGNTKVWYKAP--GHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIMAVPATVIYFTCYDQLFALLK-LKMGDRSDL---APLFAGAIARVGSATVISPLELIRTKMQS 172
BLAST of DY262788 vs. ExPASy Swiss-Prot
Match: S2539_DANRE (Solute carrier family 25 member 39 OS=Danio rerio GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.945e-11 Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 3 Query: 522 PLDVAKTRLQAQ---------AAGVPYEGLCRTASFESNMMLSDM-------RNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISRYPIKLARTRMQA 968 PLDV K RLQAQ A P+ + R + ++ + + + +N SC+ + + GTLD F K+ EG LW G +L ++VP IY CYD R +F + ++PL+AG +AR A P++L RT+MQ+ Sbjct: 35 PLDVVKIRLQAQQTPLFQAIAAESRPWFRVTRPSKWKCFLYCNGLMDHVYVCQNMSSCSNLYKTS------THFSGTLDAFVKITHNEGLRSLWSGLPPTLVMAVPATVIYFTCYDQLR----DFLCYSMGYHGDHIPLIAGGLARLGAVSVISPLELVRTKMQS 189 The following BLAST results are available for this feature:
BLAST of DY262788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262788 ID=DY262788; Name=DY262788; organism=Citrus clementina; type=EST; length=1109bpback to top |