DY262794

Overview
NameDY262794
Unique NameDY262794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1178
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.054e-40
Identity = 90/122 (73.77%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MSS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.054e-40
Identity = 90/122 (73.77%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MSS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.126e-39
Identity = 89/122 (72.95%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            M+S F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.471e-39
Identity = 89/122 (72.95%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MS+ F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.471e-39
Identity = 89/122 (72.95%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MS+ F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.921e-39
Identity = 89/122 (72.95%), Postives = 89/122 (72.95%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MSS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.921e-39
Identity = 89/122 (72.95%), Postives = 89/122 (72.95%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MSS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.921e-39
Identity = 89/121 (73.55%), Postives = 89/121 (73.55%), Query Frame = 2
Query:   32 SSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            SS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    3 SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.588e-39
Identity = 88/122 (72.13%), Postives = 88/122 (72.13%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            M S F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPK KSYYLFDGY                 MAIGIVGDAGVR
Sbjct:    1 MPSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.588e-39
Identity = 88/122 (72.13%), Postives = 89/122 (72.95%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MSS F GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGY                 MAIGIVGDAGVR
Sbjct:    1 MSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 122          
The following BLAST results are available for this feature:
BLAST of DY262794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_KALDA5.054e-4073.77V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI5.054e-4073.77V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.126e-3972.95V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_MESCR1.471e-3972.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.471e-3972.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ1.921e-3972.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI1.921e-3972.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH1.921e-3973.55V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_TOBAC5.588e-3972.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_AVESA5.588e-3972.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DH06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262794 ID=DY262794; Name=DY262794; organism=Citrus clementina; type=EST; length=1178bp
CGATCGGTTCTTTTTAGGAGGAATTGAAATGTCATCCGCGTTCATTGGCG
ATGAAACGGCGCCTTTTTTCGGCTTCCTCGGCGCCGCTGCCGCCCTTGTT
TTCTCCTGCATGGGAGCAGCGTATGGGACGGCGAAGAGTGGAGTGGGCGT
AGCATCGATGGGAGTGATGAGGCCAGAGCTTGTAATGAAATCGATTGTGC
CAGTTGTGATGGCGGGAGTGTTAGGTATTTATGGTTTAATTATTGCTGTT
ATTATTAGTACTGGCATTAACCCAAAGGCCAAATCATATTATCTATTCGA
TGGCTACGCTCATTTGTCTTCGGGTCTCGCTTGCGGCCTCGCTGGTCTCT
CTGCTGGTATGGCTATTGGCATCGTTGGTGATGCTGGTGTCAGGTATTTT
TCTCACATTTTTTTTTATATCATTTCACTTATTGATTTAAATAAAATTTT
TCATTTTTCATTTCATATTAATTTTTATGTTCTAGTCTTCAAGTTCTTTT
ACGAAGATGACAGAGTGTATTTGTATGACTGAATTTGATGCTGCCAATTG
CCAAATGTGACCGTAGTAACACCCTTAAAGACCATGCACAAAGCATAATA
TCCTGTGAAGAGTTGATGTCTTTGATAAAGAGAACTATAAAATGAATTTA
ATTTTACAATATGTGTAAATGAGGCCTGCTTAATTCTTATCTTTTTTCTG
TTAGTTTTGAAATCTATTGATTCATGTTTGATAGATGGTGTGGCTTTTGG
TTCATTAACTTGTTAAATATGTTGAGTAATCACAGTTTTGGTTAATTTTT
TGCTTCTGTATTTACTATTAGCATTTTGTTCTAATCTGATAACAGTGCCG
CATTATTGAAGCAAGATAATAGTAGCTTCATTGTACAGAGTGAAACATCA
CGACATTTTGCATGAACATGCATATGGCTGTGCTTTTCCTTTAGCTGTGT
CTTTGATTATCAGATTTCCTGAGGTCTTTCATCTTGGGTTCTGGTGAGGA
CCCTGAAGCCATAAATTGCTCCTCATCCAAAAAAATGAATCTGCTTTAGT
TTGGATGAATTGACCCAATTGCATAATTTGGCTTTGTTTACCGGAATTCT
ACTGGAGGTGGTTTGAATTTTTTCCCCAAAACTGGCTTGGGCGTCTCAAG
GGGGGGTTTAAAATCCTGGTTTGCCTTT
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