DY262799

Overview
NameDY262799
Unique NameDY262799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262799 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.901e-11
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:  124 DPDFSGS--ARFDKPRISAARVIGASTASFSGVSSLIFRFPPNFVRQLSTKARRNCSNIGVAQI 309
            DPD  GS      + R+ A+  I +S    +G+SS I RFPPNFVRQLS KARRNCSNIGVAQI
Sbjct:   25 DPDLVGSPVGGSSRRRVHASAGISSSFTGDAGLSSRILRFPPNFVRQLSIKARRNCSNIGVAQI 88
The following BLAST results are available for this feature:
BLAST of DY262799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH2.901e-1159.38Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DH11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262799 ID=DY262799; Name=DY262799; organism=Citrus clementina; type=EST; length=977bp
ATCATAGAAGACCGAGAGAGCAAAGCCGCCGTTCAATACGACGTCGTAAT
GGCCGTGTCCTCATGTTCGAGTCAAAAAATTTTGTCCTTCTCTTCTTCAT
GTTCGTCTTTTGAGTGCCGGTCCGATCCCGACTTCTCGGGCTCCGCTCGG
TTTGATAAACCGAGGATCTCGGCGGCGCGAGTCATTGGAGCCTCGACGGC
GTCGTTTAGCGGCGTGTCGTCTCTGATTTTCAGGTTTCCGCCGAACTTCG
TACGCCAGCTTAGCACGAAGGCCAGGAGGAACTGCAGCAACATCGGCGTG
GCGCAAATCGTGGCGGCTTCGTGGTCGAACAGTGTGGGTTCCGGCTCTAA
CTCGCGGCGGCTACAGCCGCTTCGGCTGCCCCGGGCCCCGCCCGCCCCGG
TCGAGATTACGAGCGGCGATGAACTTGCCCTTGGTGAAGGAATGAAAAAG
TACAGCTGGAAACCCTCCTTAATTTAAAAAAAAGGCTTCCTTTTTAACTT
CCAAGGGGAACCTTGAATTCAGGCCGGGAAAAATTAGGTCGGGGTAAAGA
AAAAAAGGCAATACAAACCCCATGGGGAAAACCTCTGGCTACTTTTTTAA
AAAAATTGGTTAACTTTTTGAATTTCAGGGAAAAACTTCCGGCAAGTTTT
TAAATAGGGGAGGTAGGGAAACCCCAAAAATGTGGTCCCTTAAGGAAAAA
AATAATGGACTTTAGGGGGGGCGAAAACCACGGGAATATATGGCTTTGGG
AAAGAGGGGCAAACAAACCCTGTTTTTGGGGTTTGGTTTCCCCCGGGGGG
GGAATTTTGGGAAACCCCTCGAGTTGTTAACGGGAAAAAAAAAATTTTTC
TTTTAAAAGGTTTTTGCCCCAAAAGGGGAAAAGCGGGTCCGGGGAATTTC
CCCCCTCTAAAAAGAAAGGGTTTGGGGGGCGCCACCCAACAAAAAAAAAG
GTTTCCCAAATTTTTTTTCCCAAGTCT
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